Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 1.0e-145 520.4 326 100.0
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 3.3e-56 223.0 307 49.5
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.8e-55 219.2 212 70.8
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 8.2e-55 218.4 291 62.2
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 3.1e-54 216.5 297 59.9
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.0e-54 216.1 221 66.5
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 4.5e-53 212.6 192 75.0
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 1.3e-52 211.1 292 58.2
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.3e-52 211.1 297 55.9
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 1.7e-52 210.7 193 71.0
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 1.7e-52 210.7 297 54.5
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 8.4e-52 208.4 292 53.1
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 1.1e-51 208.0 190 72.1
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 2.5e-51 206.8 203 66.5
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 2.5e-51 206.8 194 70.6
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 5.5e-51 205.7 189 71.4
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 7.1e-51 205.3 192 71.4
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 1.6e-50 204.1 296 56.8
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 2.1e-50 203.8 179 76.5
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 3.5e-50 203.0 195 64.6
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 1.3e-49 201.1 195 57.4
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 1.3e-49 201.1 213 65.3
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 2.3e-49 200.3 304 57.9
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 2.3e-49 200.3 197 58.4
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 2.3e-49 200.3 187 61.5
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 6.7e-49 198.7 295 55.6
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 6.7e-49 198.7 194 70.6
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 8.7e-49 198.4 329 49.8
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 8.7e-49 198.4 297 55.2
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 1.1e-48 198.0 203 66.5
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 1.1e-48 198.0 194 70.1
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.1e-48 198.0 297 53.2
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 1.1e-48 198.0 299 49.5
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 1.9e-48 197.2 196 66.3
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 5.7e-48 195.7 194 69.6
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 5.7e-48 195.7 194 69.6
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 5.7e-48 195.7 297 53.9
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 1.3e-47 194.5 294 55.1
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 1.3e-47 194.5 192 68.8
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 2.2e-47 193.7 292 51.4
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 2.2e-47 193.7 167 77.2
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 2.8e-47 193.4 292 56.5
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 3.7e-47 193.0 177 72.3
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 6.3e-47 192.2 179 73.2
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 6.3e-47 192.2 291 48.1
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 6.3e-47 192.2 192 69.8
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 6.3e-47 192.2 121 76.0
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 8.2e-47 191.8 177 71.8
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 1.4e-46 191.0 184 68.5
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 1.4e-46 191.0 181 69.1
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 1.4e-46 191.0 123 75.6
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 1.4e-46 191.0 186 69.9
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 1.8e-46 190.7 291 46.7
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 1.8e-46 190.7 171 73.7
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 2.4e-46 190.3 192 69.3
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 2.4e-46 190.3 177 71.2
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 3.1e-46 189.9 197 68.0
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 4.1e-46 189.5 187 67.4
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 4.1e-46 189.5 325 47.1
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 4.1e-46 189.5 192 63.5
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 4.1e-46 189.5 130 72.3
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 5.3e-46 189.1 291 49.8
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 6.9e-46 188.7 193 64.2
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 6.9e-46 188.7 120 75.8
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 6.9e-46 188.7 135 69.6
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 9.0e-46 188.3 177 71.2
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 9.0e-46 188.3 168 73.8
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 9.0e-46 188.3 193 69.4
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 1.2e-45 188.0 291 57.7
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 1.2e-45 188.0 291 53.3
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 1.2e-45 188.0 172 68.0
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 1.2e-45 188.0 203 55.7
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 1.2e-45 188.0 130 72.3
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 1.5e-45 187.6 299 52.2
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 2.0e-45 187.2 289 57.8
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 2.6e-45 186.8 229 60.7
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 4.5e-45 186.0 186 71.0
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 4.5e-45 186.0 297 53.5
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 5.9e-45 185.7 298 51.0
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 5.9e-45 185.7 183 63.9
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 5.9e-45 185.7 192 70.3
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 7.6e-45 185.3 175 73.7
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 1.0e-44 184.9 171 74.9
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 2.2e-44 183.7 123 73.2
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 1.1e-43 181.4 299 55.2
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 1.1e-43 181.4 195 67.2
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 1.4e-43 181.0 168 74.4
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 1.9e-43 180.6 123 74.0
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 3.2e-43 179.9 123 74.0
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 3.2e-43 179.9 123 74.0
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 3.2e-43 179.9 123 74.0
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 4.2e-43 179.5 123 73.2
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 4.2e-43 179.5 306 48.4
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 5.5e-43 179.1 123 74.0
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 5.5e-43 179.1 123 73.2
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 7.2e-43 178.7 123 73.2
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 7.2e-43 178.7 306 42.2
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 7.2e-43 178.7 123 73.2
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 7.2e-43 178.7 181 71.8
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 1.2e-42 177.9 140 64.3
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 2.1e-42 177.2 313 50.5
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 2.7e-42 176.8 123 72.4
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 2.7e-42 176.8 123 72.4
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 2.7e-42 176.8 123 72.4
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 3.6e-42 176.4 136 66.9
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 6.1e-42 175.6 123 71.5
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 6.1e-42 175.6 123 71.5
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 1.0e-41 174.9 138 64.5
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 3.7e-39 166.4 300 42.7
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 5.9e-37 159.1 304 47.7
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 1.7e-36 157.5 104 73.1
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 4.4e-32 142.9 87 79.3
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.9e-28 130.2 299 42.8
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 1.1e-22 111.7 117 48.7
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 1.1e-22 111.7 76 69.7
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 1.2e-18 98.2 115 69.6
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 2.1e-18 97.4 195 43.6
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 6.1e-18 95.9 239 40.6
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 2.6e-16 90.5 53 83.0
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 5.7e-16 89.4 58 74.1
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 1.1e-14 85.1 60 73.3
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.5e-08 64.7 214 43.5


User provided reference genes

Program Settings