Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 1.1e-276 956.1 481 100.0
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 8.8e-114 414.8 408 51.0
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 1.5e-113 414.1 396 52.5
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.3e-112 411.0 405 52.1
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.3e-112 411.0 401 52.4
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.8e-112 409.8 467 46.7
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 4.8e-112 409.1 401 50.6
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 8.2e-112 408.3 401 52.9
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 3.1e-111 406.4 396 50.8
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 4.1e-111 406.0 417 49.2
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 4.1e-111 406.0 417 49.2
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.3e-111 405.6 401 50.1
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 6.9e-111 405.2 471 46.9
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 6.9e-111 405.2 406 50.2
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 1.2e-110 404.4 401 50.6
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.5e-110 404.1 421 48.7
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 2.0e-110 403.7 421 51.3
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 2.6e-110 403.3 406 50.2
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 3.4e-110 402.9 412 50.0
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 3.4e-110 402.9 416 49.3
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 4.5e-110 402.5 401 51.6
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 5.9e-110 402.1 399 50.9
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.9e-110 402.1 396 52.3
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 5.9e-110 402.1 395 50.9
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 7.7e-110 401.7 412 51.2
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 7.7e-110 401.7 413 50.4
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.0e-109 401.4 414 50.2
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 1.3e-109 401.0 409 49.9
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.3e-109 401.0 444 47.5
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 1.7e-109 400.6 404 51.2
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 1.7e-109 400.6 396 52.0
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 2.2e-109 400.2 396 52.0
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 2.2e-109 400.2 411 49.6
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.9e-109 399.8 396 52.0
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 3.8e-109 399.4 397 51.1
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 3.8e-109 399.4 397 50.9
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 5.0e-109 399.1 395 52.2
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.0e-109 399.1 396 51.8
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 5.0e-109 399.1 401 50.6
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 6.5e-109 398.7 401 51.1
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 6.5e-109 398.7 401 49.4
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 8.5e-109 398.3 397 50.6
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 8.5e-109 398.3 401 48.9
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 1.1e-108 397.9 396 52.0
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 1.1e-108 397.9 401 51.4
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 1.9e-108 397.1 401 49.6
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.5e-108 396.7 396 51.0
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 4.2e-108 396.0 401 50.9
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 9.4e-108 394.8 433 49.7
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 9.4e-108 394.8 401 50.4
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 1.2e-107 394.4 413 50.1
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 2.7e-107 393.3 462 47.0
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 4.7e-107 392.5 416 50.0
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 4.7e-107 392.5 404 50.0
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 1.4e-106 391.0 412 48.5
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 1.8e-106 390.6 413 48.7
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 2.3e-106 390.2 408 50.5
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 2.3e-106 390.2 408 50.5
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 3.0e-106 389.8 401 49.6
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 3.9e-106 389.4 416 49.5
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 5.1e-106 389.0 404 49.8
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 5.1e-106 389.0 413 50.1
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 8.8e-106 388.3 396 50.0
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.1e-105 387.9 404 49.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 1.5e-105 387.5 396 49.7
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 1.5e-105 387.5 408 50.0
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.5e-105 387.5 413 50.1
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 2.0e-105 387.1 381 50.9
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 2.0e-105 387.1 396 49.7
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 2.6e-105 386.7 396 50.3
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 2.6e-105 386.7 413 48.2
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 4.4e-105 386.0 401 49.6
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 4.4e-105 386.0 408 49.5
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 5.7e-105 385.6 401 50.9
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 5.7e-105 385.6 396 50.0
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 1.3e-104 384.4 408 49.8
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 2.2e-104 383.6 408 49.3
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 2.2e-104 383.6 413 49.6
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 8.2e-104 381.7 396 50.0
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.1e-103 381.3 396 49.7
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 3.1e-103 379.8 404 47.0
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.5e-102 377.5 390 49.5
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.5e-102 377.5 397 49.9
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 4.5e-102 375.9 413 48.2
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 1.3e-101 374.4 425 47.3
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.9e-101 373.2 397 48.6
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 3.8e-101 372.9 459 45.5
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 7.2e-100 368.6 360 50.3
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 3.0e-98 363.2 423 46.3
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.6e-97 360.1 401 47.6
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 7.4e-97 358.6 434 45.2
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 2.8e-96 356.7 438 44.3
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 9.1e-95 351.7 401 47.1
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 2.7e-91 340.1 393 46.6
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 2.6e-89 333.6 330 50.0
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 4.4e-81 306.2 335 48.1
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 4.9e-80 302.8 434 41.7
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 2.8e-75 287.0 308 47.4
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 3.6e-75 286.6 284 51.1
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 2.6e-73 280.4 403 41.4
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 5.6e-52 209.5 198 53.0
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 5.6e-52 209.5 198 53.0
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.2e-43 181.8 145 59.3
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 3.8e-40 170.2 146 57.5
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 2.4e-26 124.4 188 36.7
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 9.6e-12 75.9 88 46.6


User provided reference genes

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