Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0114s0003 Marchantia polymorpha HOM05D006388 ORTHO05D008026 2.2e-307 1058.1 537 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3994 Anthoceros agrestis HOM05D006388 ORTHO05D008026 2.7e-87 327.0 537 42.5
Potri.004G067200 Populus trichocarpa HOM05D006388 ORTHO05D008026 1.3e-68 265.0 503 36.8
SEGI_28863 Sequoiadendron giganteum HOM05D006388 ORTHO05D008026 1.2e-66 258.5 486 36.8
Dinv03508 Davidia involucrata HOM05D006388 ORTHO05D008026 5.8e-66 256.1 509 36.3
Eucgr.K02329 Eucalyptus grandis HOM05D006388 ORTHO05D008026 7.6e-66 255.8 511 35.4
Psat1g118840 Pisum sativum HOM05D006388 ORTHO05D008026 1.3e-65 255.0 522 34.9
MapolyY_B0043 Marchantia polymorpha HOM05D006388 ORTHO05D008026 3.8e-65 253.4 128 97.7
Medtr6g068920 Medicago truncatula HOM05D006388 ORTHO05D008026 1.9e-64 251.1 516 34.7
TPR.G31361 Trifolium pratense HOM05D006388 ORTHO05D008026 4.2e-64 250.0 514 34.0
PGR044G0861 Punica granatum HOM05D006388 ORTHO05D008026 1.6e-63 248.1 503 32.6
Nitab4.5_0001495g0050 Nicotiana tabacum HOM05D006388 ORTHO05D008026 3.5e-63 246.9 507 34.3
Lalb_Chr03g0034281 Lupinus albus HOM05D006388 ORTHO05D008026 7.9e-63 245.7 513 34.3
Lj5A168G91 Lonicera japonica HOM05D006388 ORTHO05D008026 6.7e-62 242.7 545 33.0
Nitab4.5_0007717g0060 Nicotiana tabacum HOM05D006388 ORTHO05D008026 1.5e-61 241.5 507 33.3
Lj2g0005711 Lotus japonicus HOM05D006388 ORTHO05D008026 1.9e-61 241.1 517 34.4
Sabra04G0045000 Salix brachista HOM05D006388 ORTHO05D008026 1.9e-61 241.1 533 33.8
TAR622G0711 Trochodendron aralioides HOM05D006388 ORTHO05D008026 4.3e-61 240.0 510 34.7
Glyma.16G210900 Glycine max HOM05D006388 ORTHO05D008026 1.6e-60 238.0 527 34.7
Pp3c1_7520 Physcomitrium patens HOM05D006388 ORTHO05D008026 1.6e-60 238.0 528 33.3
Phvul.004G137100 Phaseolus vulgaris HOM05D006388 ORTHO05D008026 2.1e-60 237.7 503 33.8
arahy.Tifrunner.gnm1.ann1.V0741V Arachis hypogaea HOM05D006388 ORTHO05D008026 2.8e-60 237.3 512 34.4
Cfa017806 Carpinus fangiana HOM05D006388 ORTHO05D008026 6.2e-60 236.1 518 34.6
ECA236G2607 Erigeron canadensis HOM05D006388 ORTHO05D008026 6.2e-60 236.1 505 32.7
arahy.Tifrunner.gnm1.ann1.586MWM Arachis hypogaea HOM05D006388 ORTHO05D008026 1.4e-59 235.0 515 34.6
PGSC0003DMG400015280 Solanum tuberosum HOM05D006388 ORTHO05D008026 1.4e-59 235.0 516 34.1
ATR0124G024 Amborella trichopoda HOM05D006388 ORTHO05D008026 1.2e-58 231.9 510 33.5
CiPaw.15G107500 Carya illinoinensis HOM05D006388 ORTHO05D008026 1.2e-58 231.9 508 34.6
Thhalv10018586m.g Eutrema salsugineum HOM05D006388 ORTHO05D008026 1.5e-58 231.5 507 34.1
HanXRQChr05g0141681 Helianthus annuus HOM05D006388 ORTHO05D008026 1.5e-58 231.5 501 33.7
DCAR_014753 Daucus carota HOM05D001996 ORTHO05D002072 2.0e-58 231.1 472 33.7
Atru.chr6.990 Acer truncatum HOM05D006388 ORTHO05D008026 5.8e-58 229.6 506 34.2
Ca_25279_v3 Cicer arietinum L. HOM05D006388 ORTHO05D008026 5.8e-58 229.6 502 34.9
Sopen03g029690 Solanum pennellii HOM05D006388 ORTHO05D008026 5.8e-58 229.6 515 33.8
SMO169G0166 Selaginella moellendorffii HOM05D006388 ORTHO05D008026 9.9e-58 228.8 475 34.9
Prupe.5G245000 Prunus persica HOM05D006388 ORTHO05D008026 1.7e-57 228.0 524 34.7
Cpa.g.sc168.3 Carica papaya HOM05D006388 ORTHO05D008026 2.2e-57 227.6 503 33.4
Duzib128G0602 Durio zibethinus HOM05D006388 ORTHO05D008026 3.8e-57 226.9 504 33.1
VMungo0464G0944 Vigna mungo HOM05D006388 ORTHO05D008026 3.8e-57 226.9 522 32.6
Lsat_1_v5_gn_8_64640 Lactuca sativa HOM05D006388 ORTHO05D008026 4.9e-57 226.5 506 33.8
MD14G1246700 Malus domestica HOM05D006388 ORTHO05D008026 4.9e-57 226.5 522 34.5
CAN.G861.30 Capsicum annuum HOM05D006388 ORTHO05D008026 1.1e-56 225.3 511 32.3
ClCG10G003610 Citrullus lanatus HOM05D006388 ORTHO05D008026 1.1e-56 225.3 473 33.6
Oeu063709.3 Olea europaea HOM05D006388 ORTHO05D008026 1.9e-56 224.6 504 33.9
SGA_v2.0_scaffold25G10731 Striga asiatica HOM05D006388 ORTHO05D008026 1.9e-56 224.6 508 32.7
MBI03_g13439_MAGBIO Magnolia biondii HOM05D006388 ORTHO05D008026 2.4e-56 224.2 503 33.8
PSO063G3611 Papaver somniferum HOM05D006388 ORTHO05D008026 2.4e-56 224.2 503 33.4
BraA02t06912Z Brassica rapa HOM05D006388 ORTHO05D008026 4.2e-56 223.4 506 31.6
AT1G73380 Arabidopsis thaliana HOM05D006388 ORTHO05D008026 5.5e-56 223.0 505 33.5
TPR.G3132 Trifolium pratense HOM05D006388 ORTHO05D008026 5.5e-56 223.0 451 34.4
COL.COLO4_30052 Corchorus olitorius HOM05D006388 ORTHO05D008026 7.1e-56 222.6 531 31.6
C02p31040 Brassica napus HOM05D006388 ORTHO05D008026 1.2e-55 221.9 503 32.4
Gohir.D08G245800 Gossypium hirsutum HOM05D006388 ORTHO05D008026 2.7e-55 220.7 504 34.1
Carub.0002s2012 Capsella rubella HOM05D006388 ORTHO05D008026 3.5e-55 220.3 505 32.5
Manes.02G226400 Manihot esculenta HOM05D006388 ORTHO05D008026 3.5e-55 220.3 506 34.0
Nn4g26682 Nelumbo nucifera HOM05D006388 ORTHO05D008026 3.5e-55 220.3 505 33.9
BolC2t09150H Brassica oleracea HOM05D006388 ORTHO05D008026 4.6e-55 219.9 506 32.0
RcHm_v2.0_Chr7g0176951 Rosa chinensis HOM05D006388 ORTHO05D008026 6.0e-55 219.5 509 33.0
TWI15G1133 Tripterygium wilfordii HOM05D006388 ORTHO05D008026 6.0e-55 219.5 481 33.7
EL10Ac8g19473 Beta vulgaris HOM05D006388 ORTHO05D008026 1.3e-54 218.4 506 31.8
AL2G33160 Arabidopsis lyrata HOM05D006388 ORTHO05D008026 2.3e-54 217.6 505 33.1
CARHR066430 Cardamine hirsuta HOM05D006388 ORTHO05D008026 2.3e-54 217.6 508 32.7
CsaV3_3G003610 Cucumis sativus L. HOM05D006388 ORTHO05D008026 2.3e-54 217.6 473 33.4
Sp5g28310 Schrenkiella parvula HOM05D006388 ORTHO05D008026 3.0e-54 217.2 505 32.7
Gohir.A08G225400 Gossypium hirsutum HOM05D006388 ORTHO05D008026 3.9e-54 216.9 504 33.9
Aa31LG4G3650 Aethionema arabicum HOM05D006388 ORTHO05D008026 5.1e-54 216.5 506 31.0
Gorai.004G262300 Gossypium raimondii HOM05D006388 ORTHO05D008026 5.1e-54 216.5 504 33.5
FAN08G3112 Fragaria x ananassa HOM05D006388 ORTHO05D008026 8.7e-54 215.7 514 32.1
MELO3C014032.2 Cucumis melo HOM05D006388 ORTHO05D008026 1.1e-53 215.3 473 33.0
Thecc.05G197200 Theobroma cacao HOM05D006388 ORTHO05D008026 1.9e-53 214.5 508 31.9
FvH4_5g18560 Fragaria vesca HOM05D006388 ORTHO05D008026 3.3e-53 213.8 509 31.8
FAN18G2055 Fragaria x ananassa HOM05D006388 ORTHO05D008026 3.3e-53 213.8 510 32.4
AUR62040788 Chenopodium quinoa HOM05D006388 ORTHO05D008026 7.4e-53 212.6 476 33.6
Cc00_g12620 Coffea canephora HOM05D006388 ORTHO05D008026 9.6e-53 212.2 531 30.7
Ah.14g085810 Amaranthus hybridus HOM05D006388 ORTHO05D008026 2.1e-52 211.1 476 30.0
CANSAT80G2370 Cannabis sativa HOM05D006388 ORTHO05D008026 2.1e-52 211.1 504 32.7
THA.LOC104813931 Tarenaya hassleriana HOM05D006388 ORTHO05D008026 3.7e-52 210.3 503 34.2
A02p18710 Brassica napus HOM05D006388 ORTHO05D008026 4.8e-52 209.9 507 31.4
FAN13G2679 Fragaria x ananassa HOM05D006388 ORTHO05D008026 4.8e-52 209.9 508 32.1
Sed0000986 Sechium edule HOM05D006388 ORTHO05D008026 2.4e-51 207.6 475 31.6
CDE04G0152 Ceratophyllum demersum HOM05D006388 ORTHO05D008026 5.3e-51 206.5 522 31.4
Aqoxy3G04328 Aquilegia oxysepala HOM05D006388 ORTHO05D008026 1.0e-49 202.2 510 31.6
CBR_g36351 Chara braunii HOM05D006388 ORTHO05D008026 1.7e-49 201.4 528 29.0
ClCG00G000350 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.2e-49 201.1 520 30.8
Haze_18407 Corylus avellana HOM05D006388 ORTHO05D008026 8.4e-49 199.1 518 32.6
Sc10g0008630 Simmondsia chinensis HOM05D006388 ORTHO05D008026 3.5e-47 193.7 493 30.2
Solyc03g019930.4 Solanum lycopersicum HOM05D006388 ORTHO05D008026 6.7e-46 189.5 506 30.4
SalBow5G5586 Salvia bowleyana HOM05D006388 ORTHO05D008026 8.7e-46 189.1 511 31.9
Rhsim08G0125300 Rhododendron simsii HOM05D006388 ORTHO05D008026 1.4e-43 181.8 572 29.0
HPP92_007318 Vanilla planifolia HOM05D006388 ORTHO05D008026 2.2e-41 174.5 184 50.0
Peaxi162Scf00171g00011 Petunia axillaris HOM05D006388 ORTHO05D008026 1.1e-40 172.2 170 50.0
GSVIVG01024248001 Vitis vinifera HOM05D006388 ORTHO05D008026 1.1e-40 172.2 181 49.2
unitig_749.g14324 Utricularia gibba HOM05D006388 ORTHO05D008026 7.2e-40 169.5 196 45.4
Os10g0489800 Oryza sativa ssp. japonica HOM05D006388 ORTHO05D008026 1.3e-38 165.2 218 41.7
Migut.O00278 Erythranthe guttata HOM05D006388 ORTHO05D008026 2.3e-38 164.5 175 46.9
Duzib128G0966 Durio zibethinus HOM05D006388 ORTHO05D008026 1.1e-37 162.2 174 47.7
Zm00001eb068340 Zea mays HOM05D006388 ORTHO05D008026 1.1e-37 162.2 172 47.7
Glyma.09G161700 Glycine max HOM05D006388 ORTHO05D008026 4.3e-37 160.2 170 48.8
TPR.G27930 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-35 155.6 187 43.3
vmacro17751 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 7.2e-32 142.9 448 26.8
Ciclev10020647m.g Citrus clementina HOM05D006388 ORTHO05D008026 5.1e-30 136.7 433 29.6
Hund22363 Selenicereus undatus HOM05D006388 ORTHO05D008026 5.1e-30 136.7 441 26.5
QL10p033727 Quercus lobata HOM05D006388 ORTHO05D008026 3.3e-29 134.0 406 29.1
CSS0002556 Camellia sinensis var. sinensis HOM05D006388 ORTHO05D008026 9.1e-27 125.9 124 50.0
Actinidia34678 Actinidia chinensis HOM05D006388 ORTHO05D008026 1.2e-26 125.6 414 28.3
ClCG00G000360 Citrullus lanatus HOM05D006388 ORTHO05D008026 2.6e-26 124.4 124 47.6
Duzib128G1156 Durio zibethinus HOM05D006388 ORTHO05D008026 6.7e-22 109.8 136 41.9
ClCG00G006010 Citrullus lanatus HOM05D006388 ORTHO05D008026 8.2e-20 102.8 345 28.4
vmacro17752 Vaccinium macrocarpon HOM05D006388 ORTHO05D008026 2.6e-18 97.8 87 56.3
TPR.G31360 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-16 92.4 70 61.4
FAN04G1542 Fragaria x ananassa HOM05D006388 ORTHO05D008026 4.0e-14 84.0 164 34.8
Gohir.A08G079000 Gossypium hirsutum HOM05D006388 ORTHO05D008026 4.0e-14 84.0 348 27.9
AUR62038569 Chenopodium quinoa HOM05D006388 ORTHO05D008026 1.2e-13 82.4 316 26.6
Cre02.g083400 Chlamydomonas reinhardtii HOM05D006388 ORTHO05D008026 3.3e-13 80.9 172 34.9
Glyma.09G161751 Glycine max HOM05D006388 ORTHO05D008026 2.7e-10 71.2 119 37.0
Actinidia34679 Actinidia chinensis HOM05D006388 ORTHO05D008026 2.9e-09 67.8 82 47.6
TPR.G16379 Trifolium pratense HOM05D006388 ORTHO05D008026 1.1e-08 65.9 108 32.4
MCO09G287 Micromonas commoda HOM05D006388 ORTHO05D008026 4.2e-08 63.9 182 31.3
Hma1.2p1_0800F.1_g220210 Hydrangea macrophylla HOM05D006388 ORTHO05D008026 2.1e-07 61.6 54 55.6


User provided reference genes

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