Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 0.0e+00 1915.6 1090 100.0
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 9.5e-108 396.0 1118 36.3
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 4.5e-81 307.4 863 35.9
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.6e-33 149.4 995 26.6
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 3.3e-23 115.2 109 59.6
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 6.1e-22 110.9 113 57.5
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.0e-21 110.2 185 41.6
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 6.8e-21 107.5 108 56.5
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 2.0e-20 105.9 108 56.5
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 3.4e-20 105.1 110 56.4
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 7.5e-20 104.0 118 54.2
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.3e-19 103.2 999 24.7
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.2e-19 102.4 107 55.1
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.2e-19 102.4 107 55.1
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 3.7e-19 101.7 107 55.1
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 4.9e-19 101.3 118 53.4
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 8.3e-19 100.5 333 33.3
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 8.3e-19 100.5 107 56.1
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 8.3e-19 100.5 107 56.1
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.1e-18 100.1 138 47.1
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 1.1e-18 100.1 976 24.6
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.8e-18 99.4 966 23.6
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 2.4e-18 99.0 118 53.4
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 3.1e-18 98.6 1005 24.1
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.1e-18 98.6 107 57.0
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 4.1e-18 98.2 328 33.2
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 9.2e-18 97.1 380 32.1
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 1.2e-17 96.7 118 52.5
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.0e-17 95.9 104 55.8
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 2.0e-17 95.9 107 54.2
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 2.0e-17 95.9 118 50.8
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 3.5e-17 95.1 118 51.7
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 3.5e-17 95.1 107 54.2
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 3.5e-17 95.1 118 49.2
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 4.5e-17 94.7 118 50.8
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.5e-17 94.7 108 51.9
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.5e-17 94.7 108 51.9
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 4.5e-17 94.7 103 54.4
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 7.8e-17 94.0 118 50.0
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 1.0e-16 93.6 118 50.0
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 1.3e-16 93.2 144 45.8
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 1.3e-16 93.2 144 45.8
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 1.3e-16 93.2 144 45.8
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.3e-16 93.2 118 50.0
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 1.7e-16 92.8 1003 24.0
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 2.3e-16 92.4 107 51.4
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 2.9e-16 92.0 382 30.4
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 2.9e-16 92.0 95 52.6
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.9e-16 92.0 108 51.9
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 3.8e-16 91.7 108 49.1
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 3.8e-16 91.7 1008 25.0
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 5.0e-16 91.3 972 23.8
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 5.0e-16 91.3 193 40.9
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 5.0e-16 91.3 968 24.0
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 5.0e-16 91.3 1007 23.9
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 6.6e-16 90.9 309 33.3
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 1.1e-15 90.1 378 29.1
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.9e-15 89.4 119 51.3
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 1.9e-15 89.4 108 53.7
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 1.9e-15 89.4 118 50.0
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 2.5e-15 89.0 108 50.0
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 3.3e-15 88.6 1238 26.0
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.3e-15 88.2 1012 25.0
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 4.3e-15 88.2 1012 25.0
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 4.3e-15 88.2 107 52.3
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 4.3e-15 88.2 115 50.4
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 5.6e-15 87.8 975 23.9
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 5.6e-15 87.8 987 25.1
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.3e-15 87.4 967 23.9
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 9.5e-15 87.0 871 23.8
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.2e-14 86.7 161 39.8
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.2e-14 86.7 107 51.4
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 1.2e-14 86.7 107 51.4
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 1.2e-14 86.7 978 24.5
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 1.6e-14 86.3 973 24.2
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 2.1e-14 85.9 108 50.9
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.1e-14 85.9 228 35.1
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 2.1e-14 85.9 120 50.8
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 3.6e-14 85.1 160 38.1
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 3.6e-14 85.1 107 49.5
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 4.7e-14 84.7 1008 24.3
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 8.0e-14 84.0 366 30.1
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 8.0e-14 84.0 326 29.4
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.4e-13 83.2 974 23.0
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 1.8e-13 82.8 1038 27.3
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 2.3e-13 82.4 994 24.6
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 3.0e-13 82.0 785 23.8
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 3.0e-13 82.0 1009 24.0
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 4.0e-13 81.6 967 23.8
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 4.0e-13 81.6 104 50.0
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 5.2e-13 81.3 104 48.1
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 5.2e-13 81.3 327 28.1
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 5.2e-13 81.3 152 40.8
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 6.8e-13 80.9 429 28.4
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.2e-12 80.1 117 45.3
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 1.5e-12 79.7 976 23.9
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 1.5e-12 79.7 1029 24.3
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 2.0e-12 79.3 848 22.6
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 2.0e-12 79.3 331 27.2
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 3.4e-12 78.6 1015 24.3
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 4.4e-12 78.2 334 28.4
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 4.4e-12 78.2 1015 24.6
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.5e-12 77.4 969 23.5
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 7.5e-12 77.4 106 47.2
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 9.8e-12 77.0 993 23.9
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 1.7e-11 76.3 153 39.2
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.7e-11 75.1 336 33.0
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 3.7e-11 75.1 967 23.7
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 3.7e-11 75.1 394 29.4
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.1e-10 73.6 1030 22.9
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 1.4e-10 73.2 1009 23.9
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 1.4e-10 73.2 315 33.0
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 1.9e-10 72.8 1040 22.7
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 4.1e-10 71.6 1026 22.7
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 7.0e-10 70.9 980 22.6
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 9.2e-10 70.5 1011 23.1
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 2.7e-09 68.9 980 22.7
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.7e-09 68.9 963 23.8
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 4.6e-09 68.2 329 28.9
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 1.3e-08 66.6 162 35.8
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 1.3e-08 66.6 1050 24.5
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.7e-08 66.2 967 24.3
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.3e-08 65.9 1001 25.0
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.9e-08 65.1 322 30.7
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 3.9e-08 65.1 239 41.8
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 3.9e-08 65.1 103 42.7
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.5e-07 62.4 975 23.1
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 3.3e-07 62.0 973 22.4
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 3.3e-07 62.0 972 22.8
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 3.3e-07 62.0 359 28.1


User provided reference genes

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