Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 3.3e-96 355.1 192 100.0
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.2e-26 124.0 118 57.6
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 5.0e-20 102.1 113 46.9
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.5e-19 100.5 105 45.7
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 2.5e-19 99.8 95 57.9
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.5e-19 99.8 103 45.6
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 7.2e-19 98.2 92 53.3
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 7.2e-19 98.2 107 47.7
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.2e-18 97.4 94 50.0
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.2e-18 97.4 92 53.3
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.6e-18 97.1 138 39.1
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.6e-18 97.1 154 40.3
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 2.8e-18 96.3 138 37.7
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.8e-18 96.3 124 41.1
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 3.6e-18 95.9 180 37.2
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 3.6e-18 95.9 93 47.3
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 4.7e-18 95.5 137 40.1
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 4.7e-18 95.5 89 52.8
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 6.1e-18 95.1 144 41.0
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 8.0e-18 94.7 119 45.4
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 8.0e-18 94.7 119 43.7
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.4e-17 94.0 123 39.8
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.4e-17 94.0 134 38.1
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.8e-17 93.6 124 40.3
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.8e-17 93.6 94 50.0
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 2.3e-17 93.2 102 44.1
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 2.3e-17 93.2 108 44.4
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 2.3e-17 93.2 108 44.4
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 2.3e-17 93.2 109 45.9
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 5.2e-17 92.0 102 43.1
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.2e-17 92.0 102 43.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.2e-17 92.0 102 43.1
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.8e-17 91.7 104 43.3
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 6.8e-17 91.7 121 41.3
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 8.9e-17 91.3 91 49.5
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 8.9e-17 91.3 94 47.9
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 1.2e-16 90.9 128 39.8
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 1.5e-16 90.5 112 44.6
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.5e-16 90.5 157 35.7
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.5e-16 90.5 92 46.7
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.5e-16 90.5 108 41.7
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 2.0e-16 90.1 92 48.9
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.0e-16 90.1 102 42.2
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.0e-16 90.1 96 50.0
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 2.0e-16 90.1 82 56.1
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 2.6e-16 89.7 112 42.9
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.6e-16 89.7 105 43.8
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 3.4e-16 89.4 112 42.9
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.4e-16 89.4 104 44.2
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 4.4e-16 89.0 134 38.1
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 4.4e-16 89.0 153 35.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 7.5e-16 88.2 96 46.9
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 9.8e-16 87.8 118 44.1
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 9.8e-16 87.8 101 47.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 9.8e-16 87.8 101 47.5
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 9.8e-16 87.8 101 47.5
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.3e-15 87.4 167 37.1
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.7e-15 87.0 130 39.2
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.7e-15 87.0 118 41.5
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 2.2e-15 86.7 109 42.2
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.8e-15 86.3 102 42.2
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 3.7e-15 85.9 125 37.6
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 4.9e-15 85.5 111 39.6
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 8.3e-15 84.7 110 40.0
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 8.3e-15 84.7 125 36.8
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.1e-14 84.3 110 42.7
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 1.1e-14 84.3 89 50.6
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.4e-14 84.0 105 39.0
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 1.4e-14 84.0 135 37.0
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.8e-14 83.6 137 35.0
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.4e-14 83.2 121 41.3
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.4e-14 83.2 89 44.9
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.4e-14 83.2 92 44.6
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.1e-14 82.8 120 40.8
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 3.1e-14 82.8 91 42.9
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 7.0e-14 81.6 142 37.3
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 7.0e-14 81.6 116 37.9
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 9.2e-14 81.3 121 39.7
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 9.2e-14 81.3 91 41.8
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 9.2e-14 81.3 91 41.8
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 9.2e-14 81.3 91 41.8
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 9.2e-14 81.3 91 41.8
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 9.2e-14 81.3 124 36.3
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.6e-13 80.5 82 48.8
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.0e-13 80.1 130 36.2
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 2.7e-13 79.7 91 40.7
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 2.7e-13 79.7 89 43.8
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 2.7e-13 79.7 94 43.6
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 2.7e-13 79.7 152 34.9
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 3.5e-13 79.3 89 40.4
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 4.5e-13 79.0 127 34.6
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 7.8e-13 78.2 116 37.9
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 7.8e-13 78.2 127 34.6
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.7e-12 77.0 155 34.2
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.3e-12 76.6 115 37.4
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.3e-12 76.6 89 40.4
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.3e-12 76.6 92 41.3
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 6.6e-12 75.1 91 39.6
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.9e-11 73.6 86 45.3
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.3e-11 72.8 74 51.4
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 3.3e-11 72.8 130 33.8
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.3e-11 72.4 82 46.3
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 9.5e-11 71.2 118 33.9
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.6e-10 70.5 159 28.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.8e-10 69.7 66 53.0
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.6e-10 69.3 141 32.6
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.6e-10 69.3 89 41.6
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 3.1e-09 66.2 102 37.3
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 6.8e-09 65.1 92 35.9
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 3.4e-08 62.8 72 44.4
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 4.4e-08 62.4 85 38.8
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 4.1e-06 55.8 50 54.0


User provided reference genes

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