Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.1e-179 633.3 325 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.4e-107 393.7 277 74.7
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 8.9e-102 374.4 349 62.5
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 3.4e-101 372.5 267 72.3
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 9.2e-99 364.4 271 69.0
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.2e-93 347.4 277 63.9
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.0e-93 346.7 261 64.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 3.4e-93 345.9 298 60.7
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 9.8e-93 344.4 282 62.1
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 9.8e-93 344.4 302 59.6
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.3e-92 344.0 297 59.3
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.7e-92 343.6 264 64.8
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 2.9e-92 342.8 298 60.1
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 2.9e-92 342.8 264 65.2
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 6.4e-92 341.7 309 57.6
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 6.4e-92 341.7 260 66.2
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 8.3e-92 341.3 264 64.8
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.1e-91 340.9 297 59.6
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.4e-91 340.5 266 63.5
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.4e-91 340.5 310 58.4
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.9e-91 340.1 298 59.1
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.9e-91 340.1 266 64.7
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.4e-91 339.7 266 63.9
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.4e-91 339.7 267 63.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.4e-91 339.7 282 62.4
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 3.2e-91 339.3 260 65.0
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 4.1e-91 339.0 270 62.2
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 5.4e-91 338.6 310 57.4
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 5.4e-91 338.6 260 65.4
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 5.4e-91 338.6 267 64.0
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 7.0e-91 338.2 260 65.4
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 7.0e-91 338.2 282 59.9
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 9.2e-91 337.8 260 64.6
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 9.2e-91 337.8 279 60.9
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 9.2e-91 337.8 279 60.9
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 9.2e-91 337.8 260 64.6
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.2e-90 337.4 258 64.7
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 1.6e-90 337.0 310 57.1
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 1.6e-90 337.0 310 57.1
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 1.6e-90 337.0 266 62.8
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.6e-90 337.0 266 63.2
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.6e-90 337.0 266 63.2
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 2.0e-90 336.7 282 60.3
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 2.0e-90 336.7 277 61.7
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.0e-90 336.7 266 64.3
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.7e-90 336.3 264 64.4
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.7e-90 336.3 266 63.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 3.5e-90 335.9 264 64.0
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 4.6e-90 335.5 266 63.9
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 4.6e-90 335.5 266 62.8
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 6.0e-90 335.1 266 62.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 7.8e-90 334.7 250 65.2
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 7.8e-90 334.7 279 60.9
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.0e-89 334.3 276 60.9
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.0e-89 334.3 265 62.6
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 1.7e-89 333.6 266 62.4
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.7e-89 333.6 275 61.1
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.7e-89 333.6 261 63.2
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 2.3e-89 333.2 261 63.6
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.3e-89 333.2 261 63.6
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 3.0e-89 332.8 279 60.6
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 3.0e-89 332.8 263 63.5
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 3.9e-89 332.4 266 62.4
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 3.9e-89 332.4 279 60.2
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 3.9e-89 332.4 267 62.5
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 3.9e-89 332.4 281 59.4
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 5.0e-89 332.0 261 63.2
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 6.6e-89 331.6 265 62.3
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 1.1e-88 330.9 261 62.8
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.5e-88 330.5 267 62.5
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.5e-88 330.5 280 60.7
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.9e-88 330.1 266 61.7
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.9e-88 330.1 261 62.8
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 2.5e-88 329.7 319 56.7
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 3.3e-88 329.3 264 62.1
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 3.3e-88 329.3 263 62.4
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 4.3e-88 328.9 261 63.6
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 4.3e-88 328.9 278 59.7
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 5.6e-88 328.6 264 62.5
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 5.6e-88 328.6 275 60.4
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 9.5e-88 327.8 263 62.4
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.6e-87 327.0 266 60.5
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.6e-87 327.0 260 64.2
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.6e-87 327.0 275 58.9
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 2.1e-87 326.6 263 62.4
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.1e-87 326.6 266 61.7
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 6.2e-87 325.1 285 59.6
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 4.0e-86 322.4 265 61.5
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 6.8e-86 321.6 268 61.9
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 2.2e-84 316.6 264 60.2
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 3.7e-84 315.8 232 65.9
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 3.7e-84 315.8 232 65.9
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.4e-84 315.1 238 64.3
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 3.5e-82 309.3 227 65.6
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 1.0e-81 307.8 263 58.9
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.3e-81 307.4 229 65.5
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 3.0e-81 306.2 263 62.7
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 5.1e-81 305.4 260 59.6
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 5.1e-81 305.4 257 60.7
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 6.6e-81 305.1 240 63.8
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.1e-80 304.3 265 60.0
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 4.3e-80 302.4 232 65.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 7.3e-80 301.6 261 60.2
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 8.4e-76 288.1 249 59.4
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.1e-74 283.5 207 67.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 4.6e-74 282.3 280 53.6
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 2.3e-73 280.0 261 55.9
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 9.6e-64 248.1 260 51.9
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.2e-50 204.5 253 47.4
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 7.6e-45 185.3 236 46.6
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 6.0e-42 175.6 168 54.8
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 8.2e-39 165.2 243 41.6
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.5e-37 161.0 134 59.0
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.2e-34 151.4 103 66.0
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.1e-30 138.3 144 49.3
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 4.7e-18 96.3 123 46.3
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 9.1e-14 82.0 70 52.9


User provided reference genes

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