Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0111s0045 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.1e-259 897.9 439 100.0
Mapoly0051s0117 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.0e-230 801.6 439 85.4
Mapoly0051s0116 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.2e-228 795.4 439 84.1
Mapoly1008s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.9e-222 773.5 438 82.4
Mapoly0041s0155 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.0e-207 723.8 410 81.7
Mapoly0102s0057 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.3e-176 621.7 409 73.6
Mapoly0041s0107 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-166 590.5 411 69.8
Mapoly0041s0108 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.3e-163 577.4 396 69.7
Mapoly0041s0153 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.3e-150 535.0 331 76.7
Mapoly0041s0156 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.5e-147 525.0 329 75.4
Mapoly0288s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.8e-145 517.7 398 61.1
Mapoly0288s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.4e-144 514.6 398 60.1
Mapoly0273s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.1e-142 507.7 398 60.6
Mapoly0164s0029 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.9e-140 502.7 398 59.8
Mapoly0153s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.0e-140 501.9 421 57.0
Mapoly0164s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.5e-139 499.6 398 59.8
Mapoly1588s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.5e-139 499.6 400 61.0
Mapoly1684s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-136 490.7 411 57.9
Mapoly2704s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.0e-121 439.5 328 63.4
Mapoly0201s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.0e-120 436.8 428 51.9
Mapoly0164s0026 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.7e-116 423.7 439 49.9
Mapoly0215s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.5e-115 418.7 426 50.0
Mapoly2454s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.8e-113 411.4 307 63.2
Mapoly0304s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.8e-112 407.9 424 49.1
Mapoly0279s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.7e-111 407.1 433 49.7
Mapoly0114s0062 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.8e-111 406.4 428 48.4
Mapoly0288s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.3e-111 404.8 440 47.5
Mapoly0215s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-107 394.4 425 48.9
Mapoly0304s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.2e-103 380.2 427 46.6
Mapoly0304s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.8e-101 371.7 448 45.3
Mapoly0169s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.2e-94 348.2 452 43.6
Mapoly0041s0106 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-72 278.1 193 65.8
Mapoly0604s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.8e-72 275.8 325 48.0
Mapoly0041s0157 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.4e-71 271.9 247 55.1
Mapoly0041s0154 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.9e-63 246.9 276 49.6
Mapoly0215s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.7e-35 152.9 152 51.3
Mapoly0604s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.5e-30 137.5 132 52.3
Mapoly0041s0152 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.1e-29 134.4 79 77.2
Mapoly0093s0087 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-27 128.6 301 31.9
Mapoly0240s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-25 122.1 104 48.1
Mapoly0041s0105 Marchantia polymorpha HOM05D008342 ORTHO05D010190 7.7e-24 115.9 119 51.3
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.9e-23 114.0 280 32.5
Mapoly0070s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.0e-20 105.5 89 51.7
Mapoly0004s0026 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.4e-20 105.1 300 29.7
Mapoly0144s0012 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.0e-19 101.3 292 31.8
Mapoly0004s0025 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.3e-18 98.6 288 27.1
Mapoly0317s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.3e-18 96.3 280 28.6
Mapoly0060s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.2e-18 95.9 300 28.7
Mapoly0169s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.8e-17 94.7 151 39.1
Mapoly0273s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.1e-17 94.0 112 44.6
Mapoly0001s0182 Marchantia polymorpha HOM05D002809 ORTHO05D010190 5.3e-17 93.2 309 25.6
Mapoly0169s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-16 92.0 158 36.7
Mapoly0003s0241 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-13 82.0 315 25.1
Pp3c26_14690 Physcomitrium patens HOM05D004302 ORTHO05D004939 2.7e-13 80.9 248 27.8
Mapoly0085s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.1e-13 79.7 256 27.7
Mapoly0063s0068 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.3e-12 77.8 250 26.4
Mapoly0006s0115 Marchantia polymorpha HOM05D002809 ORTHO05D010190 3.0e-12 77.4 274 26.6
Mapoly0085s0027 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.0e-12 77.4 246 25.2
Pp3c3_32280 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.0e-11 74.7 232 30.2
Mapoly0070s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.4e-11 73.6 58 56.9
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 4.8e-10 70.1 245 24.1
Cfa014275 Carpinus fangiana HOM05D000007 ORTHO05D000521 8.2e-10 69.3 262 24.0
Mapoly0006s0116 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.1e-09 68.9 294 24.5
Mapoly0063s0081 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.4e-09 67.8 236 26.7
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 5.3e-09 66.6 270 24.4
Zm00001eb237930 Zea mays HOM05D003005 ORTHO05D004170 7.0e-09 66.2 244 28.3
Aqoxy7G00225 Aquilegia oxysepala HOM05D003005 ORTHO05D004170 9.1e-09 65.9 219 27.9
Os02g0260200 Oryza sativa ssp. japonica HOM05D003005 ORTHO05D004170 9.1e-09 65.9 246 26.8
Migut.N01573 Erythranthe guttata HOM05D003005 ORTHO05D004170 1.2e-08 65.5 221 25.8
Haze_12720 Corylus avellana HOM05D000007 ORTHO05D000521 1.6e-08 65.1 259 23.2
MD07G1142500 Malus domestica HOM05D003005 ORTHO05D004170 3.5e-08 63.9 219 26.9
Nitab4.5_0000032g0090 Nicotiana tabacum HOM05D000664 ORTHO05D000491 3.5e-08 63.9 236 27.5
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 4.5e-08 63.5 237 24.9
MD01G1073800 Malus domestica HOM05D003005 ORTHO05D004170 5.9e-08 63.2 220 27.3
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 1.3e-07 62.0 251 23.9
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 1.3e-07 62.0 283 24.0
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.2e-07 61.2 258 25.2
TAR629G3351 Trochodendron aralioides HOM05D003005 ORTHO05D004170 2.2e-07 61.2 223 24.2
arahy.Tifrunner.gnm1.ann1.HVK0R9 Arachis hypogaea HOM05D003005 ORTHO05D004170 2.9e-07 60.8 220 25.5
arahy.Tifrunner.gnm1.ann1.WVBE1P Arachis hypogaea HOM05D003005 ORTHO05D004170 2.9e-07 60.8 220 25.5
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.0e-07 60.1 238 24.8
PSO478G1885 Papaver somniferum HOM05D002809 ORTHO05D004563 5.0e-07 60.1 239 24.3
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.1e-06 58.9 246 24.8
PSO017G6955 Papaver somniferum HOM05D002809 ORTHO05D004563 1.5e-06 58.5 187 26.7
SEGI_32653 Sequoiadendron giganteum HOM05D006415 ORTHO05D008549 2.5e-06 57.8 168 25.6
HanXRQChr17g0557881 Helianthus annuus HOM05D000007 ORTHO05D000039 3.2e-06 57.4 284 22.5


User provided reference genes

Program Settings