Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 2.0e-135 485.7 244 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 1.3e-89 333.6 232 70.3
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 9.3e-88 327.4 241 66.0
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 1.0e-73 280.8 239 57.3
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 6.5e-73 278.1 240 55.8
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 1.9e-72 276.6 240 55.0
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 1.9e-72 276.6 240 55.4
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 3.2e-72 275.8 234 57.7
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 3.2e-72 275.8 236 56.8
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 2.1e-71 273.1 236 55.9
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 3.6e-71 272.3 239 55.6
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 3.6e-71 272.3 239 55.6
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 5.1e-70 268.5 232 58.2
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 5.1e-70 268.5 240 53.8
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 8.8e-70 267.7 234 54.7
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 2.0e-69 266.5 234 54.3
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 2.6e-69 266.2 236 55.5
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 4.4e-69 265.4 240 52.9
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 9.7e-69 264.2 240 55.4
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 1.3e-68 263.8 241 53.9
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 1.7e-68 263.5 233 53.2
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 2.2e-68 263.1 237 53.6
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 3.7e-68 262.3 240 53.8
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 4.8e-68 261.9 238 55.9
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 4.8e-68 261.9 238 54.6
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 4.8e-68 261.9 236 53.8
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 6.3e-68 261.5 235 55.3
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 8.2e-68 261.2 238 55.5
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 8.2e-68 261.2 234 53.4
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.1e-67 260.8 233 55.4
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.4e-67 260.4 235 55.3
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 1.4e-67 260.4 239 53.1
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 1.8e-67 260.0 246 52.0
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 1.8e-67 260.0 246 52.0
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 1.8e-67 260.0 234 54.7
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 1.8e-67 260.0 234 54.7
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 1.8e-67 260.0 234 53.0
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 2.4e-67 259.6 235 53.2
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 3.1e-67 259.2 239 54.0
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 3.1e-67 259.2 235 54.9
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.1e-67 259.2 243 53.9
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 3.1e-67 259.2 238 54.6
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 3.1e-67 259.2 234 53.8
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 4.1e-67 258.8 235 52.3
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 5.3e-67 258.5 235 55.7
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 7.0e-67 258.1 234 53.4
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 9.1e-67 257.7 232 54.3
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 1.2e-66 257.3 240 52.5
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.2e-66 257.3 236 55.5
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 1.2e-66 257.3 239 52.7
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.5e-66 256.9 236 55.5
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 4.5e-66 255.4 235 53.2
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 4.5e-66 255.4 240 51.7
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 7.7e-66 254.6 236 53.4
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 7.7e-66 254.6 236 54.7
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 1.0e-65 254.2 236 53.4
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 1.0e-65 254.2 236 53.4
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 1.3e-65 253.8 236 53.0
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 1.3e-65 253.8 240 51.7
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 1.3e-65 253.8 239 53.1
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 1.7e-65 253.4 235 54.9
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.7e-65 253.4 236 53.0
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 1.7e-65 253.4 236 53.8
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 1.7e-65 253.4 236 54.7
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 2.2e-65 253.1 236 52.5
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.9e-65 252.7 234 53.4
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 3.8e-65 252.3 236 52.5
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 3.8e-65 252.3 230 54.3
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 3.8e-65 252.3 236 54.2
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 5.0e-65 251.9 234 54.3
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 6.5e-65 251.5 236 52.5
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 6.5e-65 251.5 236 52.5
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 8.5e-65 251.1 236 52.5
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 8.5e-65 251.1 233 53.2
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 1.1e-64 250.8 237 52.3
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 1.1e-64 250.8 229 54.1
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.4e-64 250.4 234 53.8
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 1.4e-64 250.4 234 51.7
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 2.5e-64 249.6 236 52.5
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 2.5e-64 249.6 236 52.5
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 3.2e-64 249.2 236 52.1
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 3.2e-64 249.2 236 52.5
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 4.2e-64 248.8 236 52.5
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 4.2e-64 248.8 235 51.5
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 5.5e-64 248.4 236 52.1
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 5.5e-64 248.4 236 52.1
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 5.5e-64 248.4 236 52.1
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 7.2e-64 248.1 236 52.1
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 9.4e-64 247.7 233 53.2
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 1.2e-63 247.3 228 54.8
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 1.6e-63 246.9 232 53.0
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 3.6e-63 245.7 236 55.5
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 8.0e-63 244.6 235 52.3
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 2.3e-62 243.0 268 48.1
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 3.9e-62 242.3 231 54.5
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.5e-61 240.4 225 54.7
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 7.4e-61 238.0 248 49.6
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 8.2e-60 234.6 239 49.8
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 2.4e-59 233.0 239 53.1
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 7.0e-59 231.5 214 52.8
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.3e-57 227.3 191 58.6
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 3.8e-57 225.7 234 48.7
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 4.7e-55 218.8 236 48.7
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 1.0e-54 217.6 233 49.4
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.8e-54 216.9 233 49.4
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.8e-54 216.9 233 49.4
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 4.0e-54 215.7 233 48.9
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 5.2e-54 215.3 187 55.1
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 4.4e-53 212.2 203 54.2
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 5.7e-53 211.8 233 48.5
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 2.2e-49 199.9 233 46.4
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 2.2e-49 199.9 315 39.0
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 5.0e-49 198.7 131 73.3
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 9.4e-48 194.5 184 53.3
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 9.4e-48 194.5 163 57.1
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 3.6e-47 192.6 238 46.2
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 3.1e-43 179.5 184 51.1
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 4.5e-42 175.6 236 41.5
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 2.9e-41 172.9 160 55.0
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 1.1e-40 171.0 134 59.0
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 3.3e-40 169.5 157 52.2
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 3.6e-39 166.0 204 46.6
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 6.1e-39 165.2 139 59.0
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.5e-13 80.9 63 60.3
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 3.2e-11 73.2 79 45.6
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 3.2e-11 73.2 79 45.6
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.4e-11 72.4 79 43.0
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 3.3e-08 63.2 73 42.5
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 4.7e-07 59.3 72 41.7


User provided reference genes

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