Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.2e-214 749.6 384 100.0
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.7e-134 482.6 384 63.8
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.2e-127 459.1 384 58.6
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 9.7e-124 447.6 384 59.1
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 4.7e-118 428.7 369 59.3
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 5.9e-113 411.8 408 52.9
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.0e-112 411.0 380 55.5
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.4e-109 400.6 367 57.2
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 4.5e-105 385.6 361 56.2
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 6.6e-104 381.7 381 53.5
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.3e-103 379.0 381 53.5
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 5.6e-103 378.6 381 51.4
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 7.3e-103 378.3 366 54.9
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.2e-102 377.5 382 50.0
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.6e-102 377.1 365 55.3
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 1.6e-102 377.1 381 51.2
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 1.4e-101 374.0 373 52.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.0e-100 370.2 358 55.6
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.6e-100 369.8 381 51.4
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 3.4e-100 369.4 380 52.1
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 2.9e-99 366.3 381 51.2
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 2.9e-99 366.3 381 51.2
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.9e-99 366.3 358 52.8
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 2.0e-97 360.1 381 48.8
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 2.0e-97 360.1 366 52.5
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 4.6e-97 359.0 380 49.5
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 5.9e-97 358.6 382 49.2
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 5.9e-97 358.6 381 48.6
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 3.9e-96 355.9 383 48.6
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 8.6e-96 354.8 381 49.6
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 2.8e-94 349.7 382 49.5
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 4.7e-94 349.0 385 47.5
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 5.2e-93 345.5 381 47.5
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 5.2e-93 345.5 382 48.4
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 6.8e-93 345.1 382 47.1
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 5.8e-92 342.0 381 47.8
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 2.2e-91 340.1 382 47.4
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 4.9e-91 339.0 381 47.5
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 8.3e-91 338.2 381 48.0
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.2e-89 334.3 366 49.7
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 3.5e-89 332.8 381 47.2
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 6.0e-89 332.0 382 45.8
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 7.8e-89 331.6 382 45.3
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.0e-88 331.3 381 44.9
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.3e-88 330.9 381 46.2
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 6.6e-88 328.6 380 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.5e-87 327.4 267 64.4
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.5e-87 326.6 365 46.8
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 5.6e-87 325.5 370 46.8
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.2e-86 324.3 369 47.4
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.1e-86 323.6 385 45.7
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.7e-86 322.4 381 45.9
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 1.4e-85 320.9 370 47.3
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 5.2e-85 318.9 382 42.9
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 1.2e-84 317.8 370 46.5
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.5e-84 317.4 381 45.7
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 2.0e-84 317.0 382 42.7
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 3.4e-84 316.2 342 48.2
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.9e-83 313.2 383 45.2
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 8.3e-83 311.6 382 45.5
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 3.5e-81 306.2 372 45.7
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 3.5e-81 306.2 384 44.0
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 1.7e-80 303.9 381 44.4
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 6.6e-80 302.0 381 41.5
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 2.5e-79 300.1 381 42.0
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.6e-78 296.2 321 49.2
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 2.0e-76 290.4 266 57.9
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 9.9e-76 288.1 371 41.2
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 3.8e-75 286.2 270 58.5
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 9.2e-74 281.6 387 43.4
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 4.6e-73 279.3 355 43.1
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 4.6e-73 279.3 305 46.2
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 2.4e-69 266.9 370 40.5
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 2.6e-68 263.5 264 52.3
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.3e-67 261.2 371 37.7
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.1e-66 258.1 371 38.3
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 2.7e-65 253.4 361 38.8
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 6.0e-65 252.3 267 49.8
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.3e-64 251.1 361 39.1
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 1.7e-64 250.8 371 36.7
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 8.7e-64 248.4 360 39.2
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.1e-63 248.1 361 38.5
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.5e-63 246.9 371 37.5
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 4.8e-62 242.7 371 36.4
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.2e-60 238.0 381 37.5
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 1.7e-59 234.2 369 37.7
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.2e-57 228.0 480 31.9
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 3.0e-56 223.4 371 34.0
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 9.9e-52 208.4 201 55.2
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 6.4e-51 205.7 374 33.4
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.1e-50 204.9 246 43.1
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.3e-47 193.0 381 31.5
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 9.0e-45 185.3 371 31.5
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 7.6e-44 182.2 371 31.5
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 7.6e-44 182.2 348 32.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.5e-31 140.6 211 41.2
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 3.3e-31 140.2 146 52.1
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.1e-29 135.2 134 52.2
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 1.8e-29 134.4 353 29.2
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 2.6e-28 130.6 326 29.4
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 7.7e-28 129.0 303 30.4
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 3.2e-26 123.6 167 40.1
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.6e-25 121.3 432 27.1
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.0e-19 102.1 113 41.6
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.7e-19 101.3 150 40.0
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.4e-18 98.2 150 40.0
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 7.2e-18 95.9 97 48.5
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 9.7e-15 85.5 116 40.5
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 1.4e-13 81.6 122 32.0
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 2.0e-07 61.2 171 31.6


User provided reference genes

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