Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 1.3e-97 359.8 187 100.0
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 5.0e-73 278.1 188 76.6
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 1.2e-71 273.5 186 75.3
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 2.0e-69 266.2 184 72.3
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 7.4e-69 264.2 185 77.3
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 3.7e-68 261.9 184 71.7
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 4.8e-68 261.5 184 72.8
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 1.4e-67 260.0 185 71.9
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 1.4e-67 260.0 185 71.4
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 1.8e-67 259.6 184 73.4
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 4.1e-67 258.5 184 72.8
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 4.1e-67 258.5 188 70.7
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 4.1e-67 258.5 179 72.1
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 5.3e-67 258.1 184 71.7
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 5.3e-67 258.1 184 72.3
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 7.0e-67 257.7 184 71.7
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 7.0e-67 257.7 185 73.0
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 7.0e-67 257.7 185 70.8
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 1.2e-66 256.9 185 70.8
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 1.2e-66 256.9 185 71.4
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 1.2e-66 256.9 185 71.4
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.2e-66 256.9 185 71.4
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 1.2e-66 256.9 185 72.4
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 1.5e-66 256.5 185 70.8
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 1.5e-66 256.5 185 70.8
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 1.5e-66 256.5 188 71.8
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 2.0e-66 256.1 188 71.3
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.6e-66 255.8 184 71.2
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.6e-66 255.8 184 71.2
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 3.5e-66 255.4 184 71.2
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 3.5e-66 255.4 184 70.7
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 5.9e-66 254.6 185 71.4
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 5.9e-66 254.6 185 70.3
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 7.7e-66 254.2 184 71.2
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 7.7e-66 254.2 186 71.0
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 7.7e-66 254.2 184 70.7
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 7.7e-66 254.2 185 70.8
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 7.7e-66 254.2 185 70.8
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 7.7e-66 254.2 185 70.8
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 1.7e-65 253.1 185 69.7
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 2.2e-65 252.7 185 70.8
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 2.9e-65 252.3 186 70.4
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 2.9e-65 252.3 186 70.4
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 3.8e-65 251.9 186 70.4
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 3.8e-65 251.9 187 70.1
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 3.8e-65 251.9 185 70.3
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 5.0e-65 251.5 186 69.9
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 5.0e-65 251.5 186 70.4
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 5.0e-65 251.5 184 67.4
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 6.5e-65 251.1 188 68.6
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 8.5e-65 250.8 184 70.1
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 8.5e-65 250.8 186 70.4
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 1.1e-64 250.4 185 69.2
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 1.1e-64 250.4 184 70.7
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.5e-64 250.0 186 69.9
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 1.5e-64 250.0 187 70.1
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.5e-64 250.0 188 68.6
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.9e-64 249.6 184 70.7
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 2.5e-64 249.2 186 69.9
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 2.5e-64 249.2 186 69.4
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 2.5e-64 249.2 186 70.4
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 4.2e-64 248.4 184 71.7
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 4.2e-64 248.4 185 69.2
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 5.5e-64 248.1 186 69.4
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 5.5e-64 248.1 188 68.1
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 7.2e-64 247.7 184 70.1
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 7.2e-64 247.7 183 69.9
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 7.2e-64 247.7 184 70.7
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 7.2e-64 247.7 190 68.9
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 7.2e-64 247.7 184 69.0
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 9.4e-64 247.3 186 68.8
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 1.2e-63 246.9 184 69.6
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 1.2e-63 246.9 185 69.7
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 1.2e-63 246.9 184 70.1
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 1.2e-63 246.9 184 69.6
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.2e-63 246.9 188 68.1
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 1.2e-63 246.9 189 67.2
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 1.6e-63 246.5 184 70.1
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 2.1e-63 246.1 178 72.5
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 2.1e-63 246.1 184 69.6
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 2.7e-63 245.7 184 70.1
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 2.7e-63 245.7 184 70.1
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 2.7e-63 245.7 184 70.1
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 2.7e-63 245.7 184 69.6
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 3.6e-63 245.4 184 69.6
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 3.6e-63 245.4 194 66.0
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 4.7e-63 245.0 184 68.5
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 4.7e-63 245.0 184 70.1
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.0e-62 243.8 184 66.8
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 8.8e-62 240.7 184 66.8
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 8.8e-62 240.7 184 66.3
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 3.3e-61 238.8 184 66.3
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 1.3e-60 236.9 185 68.1
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 1.7e-60 236.5 184 65.2
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 4.8e-60 235.0 184 67.4
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 4.8e-60 235.0 184 67.4
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 4.8e-60 235.0 192 65.1
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 6.3e-60 234.6 194 63.4
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 8.2e-60 234.2 184 66.3
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 3.1e-59 232.3 169 70.4
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 3.1e-59 232.3 202 62.4
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 7.0e-59 231.1 187 64.7
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 9.1e-59 230.7 181 65.7
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 1.3e-57 226.9 184 65.2
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 2.5e-56 222.6 174 67.8
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 3.6e-55 218.8 180 63.3
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 4.7e-55 218.4 184 63.6
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 2.2e-52 209.5 167 70.7
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 1.8e-51 206.5 179 59.8
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 1.4e-46 190.3 132 72.7
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 6.8e-46 188.0 136 72.1
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 8.3e-44 181.0 136 69.9
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 7.0e-43 177.9 183 53.6
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 7.7e-42 174.5 185 57.3
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 8.3e-36 154.5 184 48.4
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.8e-35 153.3 182 50.0
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.6e-34 150.2 143 62.2
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 1.6e-34 150.2 165 45.5
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 4.6e-34 148.7 96 72.9
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 4.3e-32 142.1 115 67.0
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 5.6e-32 141.7 123 62.6
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 1.2e-23 114.0 135 51.9
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 1.4e-22 110.5 107 57.9
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 3.1e-22 109.4 93 60.2
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 8.9e-22 107.8 84 69.0
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 3.4e-21 105.9 106 56.6
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 1.5e-16 90.5 171 29.8
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 3.1e-14 82.8 60 76.7
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 9.9e-13 77.8 71 63.4
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 9.9e-13 77.8 167 28.7
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 3.7e-12 75.9 44 72.7
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 9.6e-08 61.2 39 66.7
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 5.2e-06 55.5 54 70.4


User provided reference genes

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