Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0107s0018 Marchantia polymorpha HOM05D004605 ORTHO05D005804 6.6e-125 450.7 219 100.0
CBR_g36839 Chara braunii HOM05D004605 ORTHO05D005804 6.2e-67 258.1 205 56.1
SMO270G0021 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 1.1e-52 210.7 207 51.2
Cre10.g464500 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 3.3e-28 129.4 229 34.1
PRCOL_00001065 Prasinoderma coloniale HOM05D004605 ORTHO05D005804 6.5e-24 115.2 175 37.7
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 3.2e-23 112.8 214 33.2
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 8.0e-22 108.2 208 31.2
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 2.3e-21 106.7 214 31.8
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 8.8e-21 104.8 218 31.7
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 9.8e-20 101.3 207 32.9
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 1.3e-19 100.9 209 32.1
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 1.3e-19 100.9 210 33.3
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 1.7e-19 100.5 209 32.1
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.7e-19 100.5 212 32.1
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 2.8e-19 99.8 214 33.2
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 2.8e-19 99.8 210 32.9
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 3.7e-19 99.4 209 31.6
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 3.7e-19 99.4 219 32.4
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 6.3e-19 98.6 209 31.6
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 6.3e-19 98.6 209 31.6
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 6.3e-19 98.6 210 32.9
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 8.3e-19 98.2 207 30.0
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 8.3e-19 98.2 217 30.0
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 1.1e-18 97.8 213 30.5
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 1.4e-18 97.4 221 31.2
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 1.8e-18 97.1 209 32.5
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 1.8e-18 97.1 216 31.5
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 2.4e-18 96.7 208 32.2
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 2.4e-18 96.7 210 31.0
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 2.4e-18 96.7 210 31.0
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.4e-18 96.7 209 33.0
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 3.1e-18 96.3 211 32.2
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 3.1e-18 96.3 211 31.3
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 3.1e-18 96.3 213 31.0
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 4.1e-18 95.9 209 30.1
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 7.0e-18 95.1 209 33.0
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 7.0e-18 95.1 211 30.3
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 7.0e-18 95.1 211 31.8
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 7.0e-18 95.1 211 30.3
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 9.1e-18 94.7 210 31.9
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 1.2e-17 94.4 208 31.2
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 1.2e-17 94.4 210 31.0
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 1.2e-17 94.4 215 30.7
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.6e-17 94.0 210 31.0
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 1.6e-17 94.0 210 31.9
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 1.6e-17 94.0 212 32.5
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 1.6e-17 94.0 208 30.3
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 1.6e-17 94.0 209 32.5
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 2.0e-17 93.6 210 31.9
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 2.0e-17 93.6 210 31.9
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 2.0e-17 93.6 208 29.3
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 2.7e-17 93.2 211 29.9
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 2.7e-17 93.2 208 31.2
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 3.5e-17 92.8 211 29.4
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 3.5e-17 92.8 210 31.4
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 3.5e-17 92.8 211 29.9
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 3.5e-17 92.8 211 30.3
Cfa025436 Carpinus fangiana HOM05D004605 ORTHO05D005804 4.5e-17 92.4 204 33.3
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 4.5e-17 92.4 201 30.3
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 4.5e-17 92.4 201 31.3
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 4.5e-17 92.4 210 29.0
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 5.9e-17 92.0 201 31.3
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 5.9e-17 92.0 209 30.6
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 5.9e-17 92.0 221 31.2
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 7.7e-17 91.7 209 31.6
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 7.7e-17 91.7 201 30.8
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 7.7e-17 91.7 209 30.6
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.3e-16 90.9 214 29.0
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 1.3e-16 90.9 213 29.6
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 1.7e-16 90.5 201 28.9
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 2.2e-16 90.1 210 30.0
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 2.9e-16 89.7 210 30.0
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 2.9e-16 89.7 212 30.7
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 3.8e-16 89.4 211 28.9
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 5.0e-16 89.0 208 29.3
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 5.0e-16 89.0 221 29.0
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 5.0e-16 89.0 210 30.5
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 6.5e-16 88.6 210 30.5
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 6.5e-16 88.6 208 30.8
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 8.5e-16 88.2 210 30.5
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 8.5e-16 88.2 208 28.8
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 8.5e-16 88.2 208 29.3
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 8.5e-16 88.2 206 29.1
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 1.1e-15 87.8 216 28.7
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 1.1e-15 87.8 217 27.6
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.5e-15 87.4 213 30.0
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 1.5e-15 87.4 213 29.1
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 1.5e-15 87.4 208 30.3
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 1.5e-15 87.4 211 26.5
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 1.5e-15 87.4 208 30.3
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.9e-15 87.0 227 29.1
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 1.9e-15 87.0 208 28.8
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 2.5e-15 86.7 211 28.4
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 3.2e-15 86.3 211 30.3
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 3.2e-15 86.3 213 29.1
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 4.2e-15 85.9 210 29.5
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 1.2e-14 84.3 201 28.9
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 1.6e-14 84.0 209 29.2
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 1.6e-14 84.0 208 29.8
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.8e-14 83.2 214 29.4
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 2.8e-14 83.2 204 29.9
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 4.7e-14 82.4 209 30.6
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 4.7e-14 82.4 209 28.7
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 6.1e-14 82.0 163 31.9
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 8.0e-14 81.6 207 27.1
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 1.0e-13 81.3 206 28.6
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 2.3e-13 80.1 194 29.9
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 3.0e-13 79.7 197 28.4
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 3.0e-13 79.7 209 26.3
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 5.2e-13 79.0 215 27.0
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 1.5e-12 77.4 165 27.9
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 1.5e-12 77.4 157 32.5
Pp3s30_530 Physcomitrium patens HOM05D004605 ORTHO05D005804 3.7e-11 72.8 217 25.8
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 2.4e-10 70.1 191 27.2
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 5.4e-10 68.9 192 27.6
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 7.0e-10 68.6 229 26.2
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 1.2e-09 67.8 177 32.2
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 1.2e-09 67.8 218 25.7
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 1.6e-09 67.4 211 27.5
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 2.0e-09 67.0 192 27.1
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 8.6e-08 61.6 111 33.3
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 8.6e-08 61.6 111 33.3
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 4.3e-07 59.3 111 30.6
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.6e-06 57.4 68 41.2
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 8.0e-06 55.1 114 34.2


User provided reference genes

Program Settings