Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.3e-213 746.1 370 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 8.8e-106 387.9 345 55.1
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 1.5e-100 370.5 341 51.0
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 2.5e-100 369.8 344 50.3
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 5.5e-100 368.6 355 48.7
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.2e-99 367.5 329 52.6
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 1.6e-99 367.1 346 50.6
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 3.0e-98 362.8 342 51.2
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 8.8e-98 361.3 346 49.7
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 1.5e-97 360.5 362 48.9
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 3.4e-97 359.4 347 49.6
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 4.4e-97 359.0 341 49.9
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 5.7e-97 358.6 343 50.4
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.3e-96 357.5 343 50.1
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.3e-96 357.5 342 49.4
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.3e-96 357.5 350 51.4
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 4.9e-96 355.5 341 50.1
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 8.3e-96 354.8 342 49.7
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 8.3e-96 354.8 352 48.3
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.4e-95 353.2 335 50.7
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.1e-95 352.8 337 49.9
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 5.4e-95 352.1 328 51.5
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 5.4e-95 352.1 355 47.6
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 9.1e-95 351.3 344 48.0
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.2e-94 350.9 335 49.9
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.5e-94 349.4 344 48.0
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 3.5e-94 349.4 335 49.6
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 4.5e-94 349.0 347 47.6
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 4.5e-94 349.0 341 49.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 5.9e-94 348.6 335 48.4
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 7.7e-94 348.2 328 50.3
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 1.3e-93 347.4 341 49.0
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 1.3e-93 347.4 328 50.3
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 2.9e-93 346.3 329 50.8
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 5.0e-93 345.5 342 48.5
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 1.5e-92 344.0 351 47.3
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.9e-92 343.6 354 46.6
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.9e-92 343.6 336 48.2
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.5e-92 343.2 343 48.7
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 7.2e-92 341.7 352 46.9
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 7.2e-92 341.7 341 48.1
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 7.2e-92 341.7 332 49.1
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 1.6e-91 340.5 341 48.1
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.0e-90 337.8 357 45.9
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 1.0e-90 337.8 345 49.3
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.0e-90 337.8 344 47.4
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 1.0e-90 337.8 341 48.1
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.4e-90 337.4 382 43.7
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.4e-90 337.4 332 50.0
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 3.0e-90 336.3 341 47.8
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 4.0e-90 335.9 351 46.7
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 4.0e-90 335.9 341 46.6
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 4.0e-90 335.9 349 45.3
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 4.0e-90 335.9 341 48.4
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 8.9e-90 334.7 338 50.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.5e-89 334.0 341 46.3
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 1.5e-89 334.0 343 47.8
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 2.0e-89 333.6 343 47.2
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 3.4e-89 332.8 341 48.4
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 5.7e-89 332.0 343 46.9
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 5.7e-89 332.0 343 46.9
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 5.7e-89 332.0 343 46.9
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 7.5e-89 331.6 340 48.5
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 3.7e-88 329.3 328 50.3
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 4.9e-88 328.9 341 46.9
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 4.9e-88 328.9 371 45.6
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.1e-87 327.8 343 45.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.8e-87 327.0 389 44.0
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 2.4e-87 326.6 349 46.7
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 5.4e-87 325.5 344 45.9
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 7.0e-87 325.1 342 45.9
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.6e-86 323.9 310 51.0
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 3.5e-86 322.8 310 48.7
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 5.9e-86 322.0 343 46.1
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.0e-85 321.2 311 49.8
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 2.3e-85 320.1 317 48.9
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 3.9e-85 319.3 316 49.1
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 7.3e-84 315.1 343 46.1
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.2e-81 307.8 320 47.5
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 6.6e-77 292.0 477 36.9
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.1e-76 291.2 279 51.3
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 2.5e-76 290.0 356 43.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 4.7e-75 285.8 334 43.4
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.1e-74 283.1 330 43.9
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 4.9e-72 275.8 327 43.7
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 2.1e-67 260.4 238 51.7
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 1.4e-66 257.7 335 42.1
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 8.4e-64 248.4 221 52.5
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.3e-52 209.9 338 35.2
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 1.2e-49 201.4 301 38.2
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 1.3e-43 181.4 179 46.9
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 2.1e-38 164.1 180 45.6
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.5e-38 163.3 131 58.8
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.5e-38 163.3 131 58.8
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 4.6e-38 162.9 164 44.5
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.2e-33 148.3 161 48.4
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.3e-27 128.3 272 32.4
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.8e-27 126.3 141 44.0
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 5.9e-17 92.8 87 48.3
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 4.6e-14 83.2 74 50.0
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 2.3e-13 80.9 74 52.7
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.1e-10 70.5 89 34.8
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 1.6e-06 58.2 54 50.0


User provided reference genes

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