Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 4.0e-116 421.8 268 100.0
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 2.2e-37 160.2 205 67.8
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 1.8e-36 157.1 148 80.4
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 5.3e-36 155.6 212 56.1
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 7.5e-30 135.2 168 54.8
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 7.5e-30 135.2 168 54.8
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 9.7e-30 134.8 161 59.0
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 9.7e-30 134.8 156 69.2
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 2.2e-29 133.7 159 59.1
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 2.2e-29 133.7 163 57.1
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 4.8e-29 132.5 159 57.9
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 8.3e-29 131.7 165 56.4
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 1.1e-28 131.3 156 58.3
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 1.1e-28 131.3 169 62.1
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 1.1e-28 131.3 159 56.0
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.8e-28 130.6 156 57.7
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 3.1e-28 129.8 155 59.4
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 5.3e-28 129.0 173 54.9
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 7.0e-28 128.6 174 52.3
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 9.1e-28 128.3 186 53.8
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.6e-27 127.5 161 56.5
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 2.0e-27 127.1 186 53.2
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 2.0e-27 127.1 155 56.1
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 3.5e-27 126.3 174 55.2
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 3.5e-27 126.3 163 55.8
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 5.9e-27 125.6 161 55.9
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 5.9e-27 125.6 163 58.9
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 5.9e-27 125.6 163 58.9
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 5.9e-27 125.6 174 54.6
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 5.9e-27 125.6 174 54.6
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 5.9e-27 125.6 159 55.3
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 7.7e-27 125.2 206 52.4
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 7.7e-27 125.2 192 52.1
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 1.0e-26 124.8 163 57.7
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 1.0e-26 124.8 163 52.8
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.7e-26 124.0 163 58.3
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.7e-26 124.0 163 58.3
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 1.7e-26 124.0 156 55.1
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 2.2e-26 123.6 159 55.3
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 2.9e-26 123.2 191 50.3
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 2.9e-26 123.2 156 55.8
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 2.9e-26 123.2 176 53.4
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 5.0e-26 122.5 177 51.4
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 5.0e-26 122.5 155 57.4
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 5.0e-26 122.5 213 46.5
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 8.5e-26 121.7 154 56.5
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 8.5e-26 121.7 184 51.6
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 8.5e-26 121.7 208 51.4
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 8.5e-26 121.7 175 52.0
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 8.5e-26 121.7 161 55.3
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 1.1e-25 121.3 155 58.7
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 1.5e-25 120.9 195 49.7
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 1.9e-25 120.6 205 49.3
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 2.5e-25 120.2 166 53.6
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 3.2e-25 119.8 162 54.3
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 3.2e-25 119.8 147 57.1
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 3.2e-25 119.8 161 55.3
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 3.2e-25 119.8 155 61.3
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 7.2e-25 118.6 154 56.5
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 1.2e-24 117.9 163 53.4
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.2e-24 117.9 161 53.4
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.2e-24 117.9 161 53.4
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 1.2e-24 117.9 163 52.8
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 2.1e-24 117.1 159 55.3
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 2.1e-24 117.1 155 56.1
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 3.6e-24 116.3 158 54.4
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 3.6e-24 116.3 158 55.1
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 3.6e-24 116.3 158 54.4
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 3.6e-24 116.3 158 54.4
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 3.6e-24 116.3 155 55.5
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 3.6e-24 116.3 155 55.5
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 4.7e-24 115.9 181 50.3
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 4.7e-24 115.9 159 55.3
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 4.7e-24 115.9 208 52.9
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 4.7e-24 115.9 159 52.8
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 6.1e-24 115.5 181 55.8
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 6.1e-24 115.5 159 54.7
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 6.1e-24 115.5 153 55.6
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 8.0e-24 115.2 158 54.4
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 8.0e-24 115.2 154 56.5
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 8.0e-24 115.2 196 49.0
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.8e-23 114.0 185 50.3
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 1.8e-23 114.0 201 46.3
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 1.8e-23 114.0 153 53.6
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 2.3e-23 113.6 145 55.9
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 2.3e-23 113.6 181 50.3
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 2.3e-23 113.6 181 50.3
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 2.3e-23 113.6 185 49.7
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 3.0e-23 113.2 165 52.7
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 4.0e-23 112.8 192 47.9
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 1.2e-22 111.3 146 55.5
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 1.2e-22 111.3 151 53.0
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 1.5e-22 110.9 154 54.5
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.5e-22 110.9 159 52.8
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 3.4e-22 109.8 197 48.7
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 4.4e-22 109.4 195 50.3
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 4.4e-22 109.4 146 56.8
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 5.7e-22 109.0 148 54.1
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 9.8e-22 108.2 175 49.7
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 2.2e-21 107.1 197 47.7
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 2.2e-21 107.1 151 53.0
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 6.3e-21 105.5 210 53.3
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 6.3e-21 105.5 153 52.9
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 1.1e-20 104.8 154 51.9
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 1.1e-20 104.8 146 53.4
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 5.4e-20 102.4 153 51.0
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 7.0e-20 102.1 206 54.4
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 4.5e-19 99.4 153 49.7
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.7e-18 97.4 163 58.3
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 8.6e-18 95.1 163 47.9
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 1.5e-17 94.4 129 56.6
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.5e-17 94.4 216 40.3
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 7.2e-17 92.0 209 46.4
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.8e-16 90.1 155 53.5
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.8e-12 77.4 187 41.2
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 8.6e-10 68.6 54 55.6
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.1e-09 68.2 69 59.4
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 9.5e-09 65.1 76 46.1
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.2e-08 64.7 136 53.7


User provided reference genes

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