Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 1.2e-130 469.9 252 100.0
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 4.2e-51 205.7 273 48.7
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 4.0e-49 199.1 253 47.0
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 2.4e-46 189.9 238 48.7
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.5e-40 170.6 261 42.5
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.5e-40 170.6 265 42.6
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 4.8e-39 165.6 263 40.7
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.8e-38 163.7 263 38.4
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 4.5e-37 159.1 258 39.5
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 4.5e-37 159.1 262 39.3
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 7.7e-37 158.3 258 39.5
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 7.7e-37 158.3 261 40.2
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 1.0e-36 157.9 259 39.8
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.7e-36 157.1 259 39.8
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.8e-36 156.0 255 39.2
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 3.8e-36 156.0 262 40.1
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 3.8e-36 156.0 263 40.3
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.0e-36 155.6 259 39.8
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 8.6e-36 154.8 261 41.0
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 1.1e-35 154.5 265 37.4
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 1.1e-35 154.5 262 40.8
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.5e-35 154.1 261 39.8
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.9e-35 153.7 262 37.4
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 2.5e-35 153.3 272 37.5
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 2.5e-35 153.3 262 38.5
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.2e-35 152.5 258 39.5
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 4.2e-35 152.5 261 39.1
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 5.5e-35 152.1 270 37.8
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 7.2e-35 151.8 247 38.1
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 9.5e-35 151.4 270 37.8
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 9.5e-35 151.4 260 37.7
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 9.5e-35 151.4 263 37.3
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 1.6e-34 150.6 256 38.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 2.1e-34 150.2 263 38.0
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 2.1e-34 150.2 264 39.4
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 3.6e-34 149.4 262 37.8
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 4.7e-34 149.1 259 39.4
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 6.1e-34 148.7 265 37.7
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 8.0e-34 148.3 262 38.5
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 8.0e-34 148.3 268 39.6
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.0e-33 147.9 262 37.4
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.0e-33 147.9 263 38.4
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.0e-33 147.9 262 38.5
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.4e-33 147.5 268 38.8
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.4e-33 147.5 259 38.6
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 1.8e-33 147.1 261 36.8
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 8.9e-33 144.8 263 38.8
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 8.9e-33 144.8 258 38.0
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.2e-32 144.4 261 37.9
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-32 144.1 256 38.3
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.5e-32 144.1 263 36.9
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.5e-32 144.1 272 37.5
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 2.0e-32 143.7 261 39.5
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 3.4e-32 142.9 291 36.1
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 3.4e-32 142.9 271 36.2
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 7.5e-32 141.7 274 35.8
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.3e-31 141.0 262 37.0
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.7e-31 140.6 268 36.6
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 2.2e-31 140.2 263 36.1
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.8e-31 139.8 261 39.5
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 4.9e-31 139.0 260 36.2
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 8.3e-31 138.3 261 37.2
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 1.1e-30 137.9 263 39.2
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 1.8e-30 137.1 258 36.4
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.4e-30 136.7 215 41.4
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 4.1e-30 136.0 258 38.4
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.6e-29 134.0 261 37.2
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 1.6e-29 134.0 260 35.0
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 1.6e-29 134.0 260 35.0
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 2.0e-29 133.7 260 35.0
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 2.0e-29 133.7 260 36.5
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 2.0e-29 133.7 262 36.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 2.0e-29 133.7 234 40.2
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 2.7e-29 133.3 261 37.2
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 3.5e-29 132.9 261 36.0
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.5e-29 132.9 265 35.5
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 5.9e-29 132.1 261 36.8
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.0e-28 131.3 273 36.6
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 1.0e-28 131.3 259 37.1
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.3e-28 130.2 269 36.1
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 2.3e-28 130.2 261 35.2
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 6.6e-28 128.6 258 34.9
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 8.6e-28 128.3 258 34.9
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.5e-27 127.5 258 34.5
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.9e-27 127.1 211 38.9
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 3.3e-27 126.3 264 34.5
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.6e-26 124.0 263 35.0
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 1.6e-26 124.0 252 36.1
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 2.8e-26 123.2 245 37.1
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 4.7e-26 122.5 257 35.0
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 8.0e-26 121.7 259 34.0
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 1.4e-25 120.9 232 36.2
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.8e-25 120.6 263 33.1
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 3.1e-25 119.8 262 34.0
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.5e-24 117.5 233 37.3
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.6e-24 116.7 261 32.6
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 3.4e-24 116.3 179 42.5
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 5.8e-24 115.5 248 36.3
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 2.2e-23 113.6 330 31.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 2.2e-23 113.6 184 39.7
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 3.7e-23 112.8 184 37.0
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 6.4e-23 112.1 239 36.0
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 4.1e-22 109.4 255 34.9
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 5.4e-22 109.0 160 42.5
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 2.0e-21 107.1 184 37.5
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.3e-19 99.8 166 39.2
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 2.1e-18 97.1 264 30.7
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.9e-15 86.7 164 36.0
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.1e-13 80.5 174 35.1
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 2.7e-13 80.1 170 32.4
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.9e-12 76.3 108 42.6
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-11 73.6 106 41.5
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.5e-11 73.6 106 41.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 8.1e-10 68.6 159 32.7
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.1e-06 58.2 46 54.3
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 3.2e-06 56.6 54 53.7
GSVIVG01034354001 Vitis vinifera HOM05D006753 ORTHO05D008521 3.2e-06 56.6 49 55.1
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 9.2e-06 55.1 67 47.8
TWI53G0448 Tripterygium wilfordii HOM05D006753 ORTHO05D008521 9.2e-06 55.1 96 37.5


User provided reference genes

Program Settings