Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 0.0e+00 1172.9 824 100.0
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 2.2e-157 560.5 431 64.3
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 7.1e-156 555.4 436 62.4
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 9.3e-156 555.1 431 63.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 6.7e-154 548.9 479 60.3
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 8.7e-154 548.5 436 62.4
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 4.3e-153 546.2 433 62.4
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 2.8e-152 543.5 405 64.7
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 3.7e-152 543.1 437 61.6
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 3.7e-152 543.1 442 62.0
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 6.2e-152 542.3 418 63.6
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 2.4e-151 540.4 433 61.9
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 4.0e-151 539.7 397 66.0
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 5.3e-151 539.3 513 53.8
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.2e-150 538.1 426 61.0
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.2e-150 538.1 417 62.8
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 4.5e-150 536.2 416 61.3
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.6e-150 535.4 416 61.3
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 9.9e-150 535.0 420 61.4
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 2.2e-149 533.9 397 64.5
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 2.9e-149 533.5 408 63.2
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.1e-148 531.6 411 63.0
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.2e-148 530.0 416 62.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 9.3e-148 528.5 422 62.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 1.2e-147 528.1 429 60.6
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 2.1e-147 527.3 407 62.2
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 2.1e-147 527.3 422 62.1
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 7.9e-147 525.4 410 62.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.0e-146 525.0 431 59.4
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.0e-146 525.0 455 58.2
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 1.3e-146 524.6 426 59.6
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 1.8e-146 524.2 409 62.8
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.0e-146 523.5 409 61.9
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 3.0e-146 523.5 459 56.4
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 6.7e-146 522.3 416 62.0
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 1.1e-145 521.5 410 62.0
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.1e-145 521.5 399 62.9
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.5e-145 521.2 427 60.7
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 4.3e-145 519.6 488 54.7
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 2.8e-144 516.9 432 59.0
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 2.8e-144 516.9 438 60.5
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 6.2e-144 515.8 421 60.6
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 1.1e-143 515.0 417 59.0
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 2.0e-142 510.8 444 57.7
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 4.5e-142 509.6 453 56.5
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 5.8e-142 509.2 466 55.8
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.9e-141 506.1 408 60.3
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 8.4e-141 505.4 436 58.0
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 2.5e-140 503.8 439 59.5
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 4.2e-140 503.1 420 59.5
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 4.2e-140 503.1 477 53.5
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 7.1e-140 502.3 432 57.9
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 2.7e-139 500.4 496 53.4
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 7.9e-139 498.8 433 58.9
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.0e-138 496.9 429 58.0
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 3.9e-138 496.5 411 59.4
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 6.7e-138 495.7 436 57.3
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.6e-136 491.1 421 59.1
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 2.2e-133 480.7 430 56.7
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 1.1e-132 478.4 455 53.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.6e-131 474.6 409 57.5
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 3.0e-130 470.3 408 56.6
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 5.7e-129 466.1 407 55.3
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.8e-127 461.1 417 55.6
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.6e-126 457.2 395 55.4
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 3.2e-124 450.3 426 54.2
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.1e-121 441.8 347 62.8
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 1.1e-113 415.2 422 51.4
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.6e-110 404.8 356 56.7
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.2e-101 374.4 441 45.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 2.2e-96 357.8 288 62.2
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.9e-80 304.3 276 56.2
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.1e-74 285.8 265 54.7
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.8e-66 258.5 300 48.0
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 7.1e-63 246.5 344 42.4
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 7.8e-62 243.0 183 65.6
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 1.3e-61 242.3 193 61.7
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 2.1e-59 235.0 180 65.0
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.0e-49 201.8 277 41.2
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 3.4e-49 201.1 193 50.8
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.2e-33 149.4 134 49.3
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 4.5e-25 120.9 134 47.0
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 2.5e-23 115.2 104 61.5
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 9.3e-23 113.2 78 62.8
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.6e-22 112.5 570 24.6
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 2.0e-12 79.0 173 35.3
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 3.3e-12 78.2 80 51.2
PRCOL_00005975 Prasinoderma coloniale HOM05D000032 ORTHO05D028824 1.1e-10 73.2 182 29.7
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 1.4e-10 72.8 95 44.2
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 4.1e-10 71.2 80 51.2
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 6.9e-10 70.5 275 28.0
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 2.6e-09 68.6 202 30.7
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 7.7e-09 67.0 83 44.6


User provided reference genes

Program Settings