Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 1.9e-178 629.0 315 100.0
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 5.4e-72 275.4 335 46.9
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.7e-65 253.8 330 44.8
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.9e-61 240.4 332 42.2
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.4e-59 234.2 322 40.1
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.6e-58 229.9 322 39.1
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 3.4e-58 229.6 327 37.0
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.3e-57 227.6 324 40.4
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 6.4e-57 225.3 326 41.4
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.1e-56 224.6 329 38.3
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 1.4e-56 224.2 328 38.7
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 5.5e-56 222.2 323 38.7
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 1.2e-55 221.1 320 37.8
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.6e-55 220.7 317 38.2
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 1.6e-55 220.7 327 39.4
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 2.1e-55 220.3 324 38.6
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 2.7e-55 219.9 323 36.8
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 2.7e-55 219.9 325 38.5
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 1.3e-54 217.6 324 39.2
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 2.3e-54 216.9 327 37.3
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 5.1e-54 215.7 322 36.0
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 5.1e-54 215.7 320 37.5
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 6.7e-54 215.3 315 40.6
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 1.5e-53 214.2 323 37.8
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 1.5e-53 214.2 323 37.8
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 2.5e-53 213.4 321 38.6
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 4.3e-53 212.6 323 37.8
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 9.6e-53 211.5 329 38.3
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 9.6e-53 211.5 327 38.5
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 9.6e-53 211.5 323 37.8
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.3e-52 211.1 322 38.2
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.3e-52 211.1 320 36.9
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 1.3e-52 211.1 324 37.3
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 1.3e-52 211.1 323 36.8
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.3e-52 211.1 325 40.0
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.3e-52 211.1 323 37.8
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 1.6e-52 210.7 323 37.8
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 2.1e-52 210.3 319 38.6
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 2.1e-52 210.3 319 37.3
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 3.7e-52 209.5 329 34.7
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 3.7e-52 209.5 335 38.5
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 4.8e-52 209.1 325 38.2
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 8.2e-52 208.4 323 39.0
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.4e-51 207.6 321 37.1
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 1.8e-51 207.2 320 39.1
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.8e-51 207.2 327 35.2
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.8e-51 207.2 321 36.1
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 2.4e-51 206.8 322 37.6
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 3.1e-51 206.5 341 35.5
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 3.1e-51 206.5 322 37.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 5.3e-51 205.7 319 37.3
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 6.9e-51 205.3 322 37.0
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 6.9e-51 205.3 323 37.2
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 9.0e-51 204.9 319 38.6
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 9.0e-51 204.9 322 37.3
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.2e-50 204.5 320 38.1
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.0e-50 203.8 321 35.8
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 2.6e-50 203.4 321 37.1
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 3.4e-50 203.0 313 38.3
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 4.5e-50 202.6 323 37.5
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 4.5e-50 202.6 328 37.8
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.7e-49 200.7 306 39.2
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.7e-49 200.7 322 37.9
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 2.2e-49 200.3 321 39.3
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 2.2e-49 200.3 319 36.4
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.2e-49 200.3 320 36.6
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 2.2e-49 200.3 322 37.0
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 2.9e-49 199.9 322 36.6
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 4.9e-49 199.1 322 36.3
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 6.5e-49 198.7 323 36.5
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 6.5e-49 198.7 323 35.9
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.9e-48 197.2 321 38.6
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 7.1e-48 195.3 332 37.7
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 9.3e-48 194.9 320 35.9
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 1.2e-47 194.5 329 36.2
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 1.6e-47 194.1 322 37.0
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 1.6e-47 194.1 322 36.0
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.1e-47 193.7 322 36.6
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 2.7e-47 193.4 318 39.6
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 3.5e-47 193.0 317 34.1
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 3.5e-47 193.0 336 36.6
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 3.5e-47 193.0 321 36.1
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 4.6e-47 192.6 320 34.7
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 4.6e-47 192.6 348 35.3
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.0e-46 191.4 323 38.4
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.8e-46 190.7 318 35.2
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 3.9e-46 189.5 322 36.3
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 6.7e-46 188.7 323 33.4
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 6.7e-46 188.7 322 37.3
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 1.5e-45 187.6 341 34.3
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 1.9e-45 187.2 367 32.4
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.3e-45 186.0 317 33.8
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 2.8e-44 183.3 320 35.6
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.5e-42 177.6 323 35.0
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 3.4e-42 176.4 278 38.5
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.2e-41 173.7 398 29.9
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 6.5e-41 172.2 323 32.8
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 2.1e-39 167.2 296 35.1
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 3.9e-38 162.9 322 36.3
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.3e-37 159.5 442 26.9
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 5.7e-37 159.1 334 33.5
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 1.3e-36 157.9 317 32.2
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 2.8e-36 156.8 317 32.2
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 1.4e-35 154.5 254 35.8
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.4e-35 154.5 275 34.9
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 5.3e-35 152.5 270 34.1
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 6.9e-35 152.1 317 31.2
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 5.0e-33 146.0 246 35.8
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.4e-32 144.4 244 36.5
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 3.2e-32 143.3 232 36.2
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 5.5e-32 142.5 280 34.6
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 7.2e-32 142.1 267 32.2
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 7.2e-32 142.1 246 33.7
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 1.1e-29 134.8 257 34.2
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 4.4e-29 132.9 236 38.6
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.2e-28 130.6 293 29.4
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 4.1e-27 126.3 327 27.8
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.0e-25 121.7 162 35.8
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.7e-23 113.6 393 24.9
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 1.5e-16 91.3 200 28.0
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 3.0e-14 83.6 241 27.8
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 5.2e-14 82.8 258 25.2
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 3.1e-11 73.6 55 61.8


User provided reference genes

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