Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0102s0057 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-228 796.2 372 100.0
Mapoly0051s0116 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-193 679.9 437 76.7
Mapoly1008s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.7e-189 666.0 447 74.3
Mapoly0051s0117 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.8e-189 664.8 436 75.2
Mapoly0111s0045 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-174 616.3 409 73.6
Mapoly0041s0155 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.8e-167 592.8 426 68.5
Mapoly0041s0107 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.2e-136 489.6 441 58.7
Mapoly0041s0108 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.7e-128 462.2 423 57.4
Mapoly0041s0153 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.6e-118 430.3 359 62.1
Mapoly0273s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.0e-115 417.9 307 64.8
Mapoly2454s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.0e-115 417.9 307 63.5
Mapoly0041s0156 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.4e-114 417.2 356 61.0
Mapoly2704s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.6e-113 412.9 311 63.0
Mapoly0164s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.4e-113 412.5 306 64.1
Mapoly0288s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.4e-113 412.1 307 63.5
Mapoly0164s0029 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.8e-111 406.8 311 61.7
Mapoly0288s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.4e-111 406.4 311 61.4
Mapoly1684s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-107 394.0 311 60.8
Mapoly1588s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.6e-107 393.7 313 62.3
Mapoly0153s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.0e-106 391.0 311 58.8
Mapoly0201s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.0e-101 374.4 304 59.5
Mapoly0114s0062 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.6e-99 367.1 304 57.6
Mapoly0164s0026 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.1e-98 362.8 305 58.0
Mapoly0279s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-97 360.5 321 56.1
Mapoly0215s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.0e-97 360.1 303 57.4
Mapoly0304s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.9e-93 345.9 299 56.5
Mapoly0288s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.3e-92 342.4 303 55.1
Mapoly0215s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.8e-90 335.1 339 53.7
Mapoly0304s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.4e-87 327.4 336 51.8
Mapoly0304s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.7e-85 320.5 313 52.1
Mapoly0169s0004 Marchantia polymorpha HOM05D008342 ORTHO05D010190 4.0e-82 309.3 320 49.1
Mapoly0041s0106 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.1e-71 274.6 193 65.3
Mapoly0041s0157 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.2e-70 271.2 247 54.7
Mapoly0604s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.7e-51 206.5 195 55.9
Mapoly0041s0154 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.0e-42 175.3 176 52.8
Mapoly0041s0152 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.9e-29 133.3 79 75.9
Mapoly0240s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 3.4e-25 120.2 91 54.9
Mapoly0001s0513 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.5e-23 114.0 280 32.1
Mapoly0093s0087 Marchantia polymorpha HOM05D008342 ORTHO05D010190 6.1e-22 109.4 301 28.9
Mapoly0144s0012 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-20 104.8 290 32.8
Mapoly0004s0026 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.7e-20 102.1 299 28.4
Mapoly0317s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.8e-18 97.8 309 28.5
Mapoly0001s0182 Marchantia polymorpha HOM05D002809 ORTHO05D010190 5.3e-18 96.3 301 26.6
Mapoly0004s0025 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.1e-18 95.5 274 26.6
Mapoly0060s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.2e-16 90.9 299 27.1
Mapoly0006s0115 Marchantia polymorpha HOM05D002809 ORTHO05D010190 1.6e-14 84.7 271 28.0
Mapoly0085s0027 Marchantia polymorpha HOM05D008342 ORTHO05D010190 8.0e-14 82.4 246 26.0
Mapoly0169s0001 Marchantia polymorpha HOM05D008342 ORTHO05D010190 2.3e-13 80.9 83 51.8
Mapoly0085s0028 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.5e-12 78.2 248 27.0
Pp3c26_14690 Physcomitrium patens HOM05D004302 ORTHO05D004939 3.3e-12 77.0 248 27.4
Mapoly0063s0068 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.7e-12 76.3 233 26.6
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 5.3e-10 69.7 240 25.4
Pp3c3_32280 Physcomitrium patens HOM05D002809 ORTHO05D004563 7.0e-10 69.3 234 29.1
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.9e-09 66.2 250 26.8
Aqoxy7G00225 Aquilegia oxysepala HOM05D003005 ORTHO05D004170 7.7e-09 65.9 220 28.6
Migut.B01816 Erythranthe guttata HOM05D003005 ORTHO05D004170 1.0e-08 65.5 220 28.6
Mapoly0041s0105 Marchantia polymorpha HOM05D008342 ORTHO05D010190 1.0e-08 65.5 56 67.9
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 1.3e-08 65.1 283 24.4
MBI07_g06328_MAGBIO Magnolia biondii HOM05D003005 ORTHO05D004170 1.7e-08 64.7 221 25.8
unitig_62.g23803 Utricularia gibba HOM05D003005 ORTHO05D004170 2.2e-08 64.3 222 27.0
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 2.9e-08 63.9 262 22.5
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 3.8e-08 63.5 243 25.9
Migut.N01573 Erythranthe guttata HOM05D003005 ORTHO05D004170 5.0e-08 63.2 218 27.5
MD07G1142500 Malus domestica HOM05D003005 ORTHO05D004170 5.0e-08 63.2 246 26.0
THA.LOC104802052 Tarenaya hassleriana HOM05D003005 ORTHO05D004170 5.0e-08 63.2 261 24.9
TAR629G3351 Trochodendron aralioides HOM05D003005 ORTHO05D004170 5.0e-08 63.2 224 25.9
Cfa014275 Carpinus fangiana HOM05D000007 ORTHO05D000521 6.5e-08 62.8 302 21.2
Zm00001eb237930 Zea mays HOM05D003005 ORTHO05D004170 6.5e-08 62.8 239 28.5
Haze_12720 Corylus avellana HOM05D000007 ORTHO05D000521 1.9e-07 61.2 296 22.3
Mapoly0006s0116 Marchantia polymorpha HOM05D002809 ORTHO05D010190 2.5e-07 60.8 256 23.0
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 2.5e-07 60.8 238 26.5
arahy.Tifrunner.gnm1.ann1.HVK0R9 Arachis hypogaea HOM05D003005 ORTHO05D004170 4.2e-07 60.1 248 24.6
arahy.Tifrunner.gnm1.ann1.WVBE1P Arachis hypogaea HOM05D003005 ORTHO05D004170 4.2e-07 60.1 248 24.6
Os02g0260200 Oryza sativa ssp. japonica HOM05D003005 ORTHO05D004170 4.2e-07 60.1 244 25.8
Mapoly0604s0002 Marchantia polymorpha HOM05D008342 ORTHO05D010190 5.5e-07 59.7 44 63.6
QL02p032184 Quercus lobata HOM05D003005 ORTHO05D004170 7.2e-07 59.3 230 27.0
Mapoly0070s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.4e-07 58.9 54 53.7
Mapoly0215s0003 Marchantia polymorpha HOM05D008342 ORTHO05D010190 9.4e-07 58.9 68 47.1
TAR636G3621 Trochodendron aralioides HOM05D003005 ORTHO05D004170 9.4e-07 58.9 224 26.3
MD01G1073800 Malus domestica HOM05D003005 ORTHO05D004170 1.2e-06 58.5 219 26.9
PSO170G2625 Papaver somniferum HOM05D000007 ORTHO05D000017 2.7e-06 57.4 264 24.6
Duzib213G0156 Durio zibethinus HOM05D008227 ORTHO05D010399 8.0e-06 55.8 292 24.0
Thecc.07G052300 Theobroma cacao HOM05D008227 ORTHO05D010399 8.0e-06 55.8 288 25.3


User provided reference genes

Program Settings