Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 0.0e+00 1078.2 573 100.0
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 6.9e-49 199.5 281 44.1
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 5.8e-48 196.4 251 47.0
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 2.1e-45 188.0 482 35.5
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 2.7e-45 187.6 517 33.5
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.8e-44 184.9 491 34.6
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 1.5e-43 181.8 491 35.0
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.3e-43 180.6 491 35.0
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 7.4e-43 179.5 469 35.0
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.6e-42 178.3 617 31.4
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 2.1e-42 177.9 496 33.9
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.8e-42 177.6 491 34.6
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.1e-41 175.6 494 34.4
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 1.4e-41 175.3 493 32.3
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.4e-41 175.3 507 33.7
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 2.4e-41 174.5 527 32.4
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 3.1e-41 174.1 512 31.4
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 4.0e-41 173.7 472 31.1
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 4.0e-41 173.7 522 31.6
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 5.3e-41 173.3 524 33.6
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 5.3e-41 173.3 496 33.9
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 6.9e-41 172.9 489 32.1
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 6.9e-41 172.9 508 33.7
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 9.0e-41 172.6 472 34.7
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 9.0e-41 172.6 504 33.1
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 9.0e-41 172.6 530 33.4
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 1.2e-40 172.2 472 32.8
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 1.5e-40 171.8 482 32.8
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.5e-40 171.8 527 32.3
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.5e-40 171.8 537 32.8
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 2.0e-40 171.4 472 31.8
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 2.0e-40 171.4 504 31.7
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 4.5e-40 170.2 516 32.4
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 5.8e-40 169.9 493 30.2
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 7.6e-40 169.5 481 33.5
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 1.0e-39 169.1 509 32.4
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.0e-39 169.1 488 30.9
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 1.3e-39 168.7 519 31.4
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 2.2e-39 167.9 551 33.6
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 3.8e-39 167.2 474 31.4
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 6.5e-39 166.4 486 31.7
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 8.4e-39 166.0 556 30.6
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 1.9e-38 164.9 486 31.5
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 1.9e-38 164.9 486 31.5
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 3.2e-38 164.1 466 31.1
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 4.2e-38 163.7 527 31.7
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 4.2e-38 163.7 476 31.3
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 5.5e-38 163.3 536 32.1
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 5.5e-38 163.3 372 36.6
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 5.5e-38 163.3 339 37.2
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 7.1e-38 162.9 496 31.2
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 7.1e-38 162.9 513 31.4
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 9.3e-38 162.5 496 31.2
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 9.3e-38 162.5 477 30.8
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 9.3e-38 162.5 568 33.8
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 1.2e-37 162.2 452 30.5
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 1.2e-37 162.2 547 31.3
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 1.6e-37 161.8 496 31.2
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 2.1e-37 161.4 514 32.7
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.7e-37 161.0 541 31.6
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 2.7e-37 161.0 470 33.2
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 3.5e-37 160.6 534 32.2
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 4.6e-37 160.2 499 30.7
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 7.9e-37 159.5 477 31.4
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.0e-36 159.1 489 30.3
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.3e-36 158.7 475 31.8
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.8e-36 158.3 569 31.6
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.8e-36 158.3 482 31.7
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.3e-36 157.9 491 29.7
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 3.9e-36 157.1 500 31.0
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 5.1e-36 156.8 493 29.8
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 5.1e-36 156.8 472 29.9
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 5.1e-36 156.8 476 32.6
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 8.7e-36 156.0 493 32.7
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 8.7e-36 156.0 499 33.1
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.1e-35 155.6 231 43.7
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 1.1e-35 155.6 537 32.0
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.1e-35 155.6 481 31.8
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 1.5e-35 155.2 521 32.1
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.5e-35 155.2 517 31.1
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 2.5e-35 154.5 558 30.8
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 2.5e-35 154.5 481 31.0
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.5e-35 154.5 495 31.9
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 2.5e-35 154.5 572 30.4
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 4.3e-35 153.7 507 31.8
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 5.7e-35 153.3 520 30.2
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 7.4e-35 152.9 508 31.1
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 9.7e-35 152.5 480 32.7
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.6e-34 151.8 492 31.1
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 3.7e-34 150.6 474 29.1
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 8.2e-34 149.4 477 30.0
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 8.2e-34 149.4 517 31.5
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.1e-33 149.1 479 29.2
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 1.1e-33 149.1 572 30.1
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.4e-33 148.7 490 31.8
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.4e-33 148.7 514 29.6
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.8e-33 148.3 519 31.0
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 2.4e-33 147.9 488 32.4
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 3.1e-33 147.5 517 31.3
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.1e-33 147.1 586 31.1
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 5.3e-33 146.7 534 31.8
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 6.9e-33 146.4 481 31.0
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 2.0e-32 144.8 479 30.1
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 2.6e-32 144.4 478 30.5
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 3.4e-32 144.1 465 30.3
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 4.5e-32 143.7 498 31.5
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 4.5e-32 143.7 399 33.3
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 5.9e-32 143.3 567 31.6
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 7.7e-32 142.9 560 30.0
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 1.0e-31 142.5 527 30.6
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 1.3e-31 142.1 520 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 1.7e-31 141.7 192 45.3
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 3.8e-31 140.6 472 30.9
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 5.0e-31 140.2 546 30.2
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 6.5e-31 139.8 516 28.9
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 1.1e-30 139.0 549 29.9
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 2.5e-30 137.9 536 30.8
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 3.2e-30 137.5 581 29.3
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 4.2e-30 137.1 204 44.6
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 4.2e-30 137.1 516 30.6
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 4.2e-30 137.1 349 32.7
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 5.5e-30 136.7 499 29.5
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 5.5e-30 136.7 421 31.8
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 9.4e-30 136.0 536 29.9
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.2e-29 135.6 559 29.0
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 2.1e-29 134.8 161 48.4
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 2.7e-29 134.4 530 30.4
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 6.1e-29 133.3 461 31.5
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 1.0e-28 132.5 300 37.7
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.0e-28 132.5 548 28.8
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 1.4e-28 132.1 386 33.7
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 2.3e-28 131.3 517 29.8
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.3e-28 131.3 230 40.9
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 3.0e-28 131.0 502 31.3
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 1.5e-27 128.6 222 42.3
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 9.7e-27 125.9 475 26.3
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 2.4e-25 121.3 185 42.2
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 6.9e-25 119.8 194 37.6
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 3.4e-24 117.5 456 29.4
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 5.9e-24 116.7 154 48.7
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.3e-23 115.5 223 39.5
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 1.3e-23 115.5 306 34.6
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 1.4e-22 112.1 174 44.3
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.4e-22 112.1 278 31.7
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 1.4e-22 112.1 272 32.4
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 7.2e-22 109.8 397 28.5
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 4.7e-21 107.1 175 43.4
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 8.8e-20 102.8 245 33.9
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 8.8e-20 102.8 119 49.6
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 8.2e-18 96.3 110 50.0
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 2.4e-17 94.7 66 68.2
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 5.3e-17 93.6 211 35.1
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 2.6e-16 91.3 139 38.8
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.5e-16 90.9 211 34.1
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.1e-14 85.9 383 27.4
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 2.1e-13 81.6 197 34.5
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 6.1e-13 80.1 429 27.0
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 8.8e-12 76.3 100 43.0
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 7.4e-11 73.2 116 45.7
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 1.3e-10 72.4 386 25.9
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 6.3e-10 70.1 56 62.5
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 4.1e-09 67.4 103 41.7
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 2.6e-08 64.7 67 49.3
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 1.7e-07 62.0 171 36.3


User provided reference genes

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