Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 3.1e-131 471.9 243 100.0
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 4.8e-44 182.2 215 46.5
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 1.5e-40 170.6 198 46.5
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 1.5e-40 170.6 197 46.2
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 4.2e-40 169.1 207 44.0
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 7.2e-40 168.3 182 47.8
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 7.2e-40 168.3 193 45.6
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 7.2e-40 168.3 204 45.6
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 1.2e-39 167.5 196 48.0
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 2.7e-39 166.4 183 48.1
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 3.6e-39 166.0 183 48.6
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 3.6e-39 166.0 193 45.6
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 4.7e-39 165.6 199 47.7
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 6.1e-39 165.2 194 47.9
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 6.1e-39 165.2 191 50.3
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 8.0e-39 164.9 183 49.7
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 8.0e-39 164.9 188 45.7
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 1.4e-38 164.1 192 45.8
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 1.4e-38 164.1 195 47.7
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 1.8e-38 163.7 199 46.7
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 2.3e-38 163.3 202 44.6
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 3.0e-38 162.9 183 48.1
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 3.0e-38 162.9 203 45.3
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 3.0e-38 162.9 197 44.7
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 6.8e-38 161.8 202 45.0
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 8.8e-38 161.4 204 43.6
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.2e-37 161.0 192 45.3
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 1.5e-37 160.6 179 48.0
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 2.0e-37 160.2 184 48.9
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 2.0e-37 160.2 178 46.6
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 2.6e-37 159.8 179 50.3
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 3.4e-37 159.5 191 45.0
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 3.4e-37 159.5 199 45.2
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 3.4e-37 159.5 192 45.8
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 5.7e-37 158.7 183 46.4
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 5.7e-37 158.7 191 45.0
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.7e-37 158.7 179 49.2
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 5.7e-37 158.7 182 47.8
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 5.7e-37 158.7 189 43.4
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 7.5e-37 158.3 202 43.6
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 7.5e-37 158.3 179 48.6
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 7.5e-37 158.3 198 44.4
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 9.7e-37 157.9 178 46.6
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 9.7e-37 157.9 195 43.6
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 9.7e-37 157.9 197 46.2
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 9.7e-37 157.9 200 45.0
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 1.3e-36 157.5 192 44.8
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 1.3e-36 157.5 198 43.9
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.7e-36 157.1 203 42.4
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 1.7e-36 157.1 198 44.4
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 2.2e-36 156.8 190 45.3
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 2.2e-36 156.8 211 43.6
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 2.8e-36 156.4 195 43.1
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 2.8e-36 156.4 195 43.1
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 3.7e-36 156.0 200 43.5
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 3.7e-36 156.0 181 44.2
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 4.8e-36 155.6 190 44.7
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.8e-36 155.6 197 42.6
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 6.3e-36 155.2 192 45.3
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 6.3e-36 155.2 198 46.0
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 6.3e-36 155.2 202 43.6
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 8.3e-36 154.8 179 49.2
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 1.4e-35 154.1 188 45.7
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 1.8e-35 153.7 192 46.9
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 1.8e-35 153.7 187 45.5
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 1.8e-35 153.7 187 45.5
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 1.8e-35 153.7 184 42.9
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 2.4e-35 153.3 213 42.7
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 2.4e-35 153.3 190 44.2
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 3.1e-35 152.9 198 44.4
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 3.1e-35 152.9 204 42.6
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 4.1e-35 152.5 211 44.1
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 4.1e-35 152.5 192 42.2
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 4.1e-35 152.5 200 43.5
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 5.3e-35 152.1 190 43.7
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 5.3e-35 152.1 181 44.2
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 7.0e-35 151.8 181 45.9
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 7.0e-35 151.8 182 46.2
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 7.0e-35 151.8 182 45.6
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 7.0e-35 151.8 185 42.7
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 9.1e-35 151.4 182 46.7
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 1.2e-34 151.0 193 43.0
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 1.6e-34 150.6 193 43.0
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 1.6e-34 150.6 193 43.0
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 1.6e-34 150.6 193 43.0
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 2.7e-34 149.8 196 43.4
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 4.5e-34 149.1 200 43.0
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 5.9e-34 148.7 178 44.4
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 5.9e-34 148.7 193 43.0
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 5.9e-34 148.7 233 39.5
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 1.3e-33 147.5 195 45.6
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 2.9e-33 146.4 128 59.4
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 2.9e-33 146.4 196 43.4
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 2.9e-33 146.4 161 50.3
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 8.5e-33 144.8 183 43.7
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 8.5e-33 144.8 190 45.3
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 1.5e-32 144.1 189 43.9
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 3.2e-32 142.9 180 42.8
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 3.2e-32 142.9 142 52.8
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 7.2e-32 141.7 136 55.9
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 2.1e-31 140.2 195 40.0
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 2.7e-31 139.8 189 42.3
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 3.6e-31 139.4 176 47.2
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 6.1e-31 138.7 174 42.0
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 1.2e-29 134.4 178 42.7
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.4e-29 132.9 155 44.5
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.4e-29 132.9 155 44.5
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.3e-28 131.0 212 38.2
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 2.8e-28 129.8 156 45.5
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 8.3e-28 128.3 113 60.2
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 1.4e-27 127.5 204 36.3
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 5.9e-26 122.1 156 45.5
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 4.2e-24 115.9 111 55.0
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 3.6e-23 112.8 159 40.9
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 4.7e-23 112.5 360 26.7
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 1.2e-21 107.8 126 46.0
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 4.4e-21 105.9 96 54.2
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 1.4e-19 100.9 136 44.9
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.0e-17 94.7 133 42.1
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 1.5e-16 90.9 193 34.2
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 4.3e-16 89.4 133 40.6
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 3.7e-12 76.3 52 65.4
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 1.1e-11 74.7 105 41.0
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 4.1e-11 72.8 61 62.3
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.2e-10 71.2 64 54.7
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.7e-10 70.1 67 50.7
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 4.6e-10 69.3 64 53.1
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 7.8e-10 68.6 129 36.4
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 3.3e-08 63.2 47 61.7
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 3.6e-07 59.7 66 50.0


User provided reference genes

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