Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 7.6e-124 447.2 231 100.0
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 7.3e-42 174.9 158 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.4e-40 169.9 136 65.4
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 8.4e-38 161.4 153 55.6
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 2.4e-37 159.8 175 54.9
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 3.2e-37 159.5 117 70.1
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 4.2e-37 159.1 160 55.6
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 7.1e-37 158.3 158 55.1
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 7.1e-37 158.3 117 68.4
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 9.3e-37 157.9 172 53.5
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.6e-36 157.1 120 68.3
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.6e-36 157.1 120 68.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 1.6e-36 157.1 236 43.6
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 2.1e-36 156.8 158 56.3
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.1e-36 156.8 122 64.8
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 2.7e-36 156.4 169 54.4
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 3.5e-36 156.0 150 59.3
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 3.5e-36 156.0 121 66.1
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 3.5e-36 156.0 117 66.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 3.5e-36 156.0 117 66.7
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 4.6e-36 155.6 120 67.5
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 4.6e-36 155.6 118 66.1
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 6.0e-36 155.2 101 75.2
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 7.8e-36 154.8 117 66.7
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.0e-35 154.5 119 65.5
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.3e-35 154.1 172 52.3
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.3e-35 154.1 114 66.7
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.7e-35 153.7 164 54.3
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 2.3e-35 153.3 119 64.7
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.3e-35 153.3 101 70.3
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.3e-35 153.3 141 58.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 3.0e-35 152.9 153 53.6
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 3.9e-35 152.5 146 56.2
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 3.9e-35 152.5 119 65.5
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.9e-35 152.5 101 72.3
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 3.9e-35 152.5 101 72.3
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 3.9e-35 152.5 118 66.9
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 5.1e-35 152.1 114 68.4
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 5.1e-35 152.1 158 55.1
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 5.1e-35 152.1 117 63.2
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 5.1e-35 152.1 111 69.4
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.6e-35 151.8 133 61.7
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 6.6e-35 151.8 122 61.5
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 8.7e-35 151.4 118 66.9
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 1.1e-34 151.0 117 63.2
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.1e-34 151.0 118 64.4
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 1.1e-34 151.0 106 68.9
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.5e-34 150.6 106 68.9
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.5e-34 150.6 132 60.6
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.5e-34 150.6 187 50.3
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.5e-34 150.6 104 70.2
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 1.5e-34 150.6 111 67.6
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.9e-34 150.2 156 54.5
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.9e-34 150.2 158 53.8
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.5e-34 149.8 141 53.9
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.5e-34 149.8 141 53.9
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 2.5e-34 149.8 151 54.3
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.5e-34 149.8 111 68.5
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.3e-34 149.4 130 61.5
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 3.3e-34 149.4 101 71.3
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 3.3e-34 149.4 155 55.5
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 3.3e-34 149.4 149 56.4
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 4.3e-34 149.1 117 62.4
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 4.3e-34 149.1 106 66.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 4.3e-34 149.1 111 62.2
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 4.3e-34 149.1 107 68.2
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 5.6e-34 148.7 174 49.4
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 7.3e-34 148.3 177 49.2
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 7.3e-34 148.3 150 56.7
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 7.3e-34 148.3 155 54.2
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 7.3e-34 148.3 127 59.8
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 7.3e-34 148.3 104 69.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 7.3e-34 148.3 104 69.2
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 7.3e-34 148.3 146 54.1
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 9.6e-34 147.9 107 67.3
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 9.6e-34 147.9 107 67.3
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 9.6e-34 147.9 107 67.3
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 9.6e-34 147.9 107 67.3
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 9.6e-34 147.9 107 67.3
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 9.6e-34 147.9 143 55.2
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 9.6e-34 147.9 106 67.0
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 9.6e-34 147.9 149 52.3
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.3e-33 147.5 107 67.3
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.6e-33 147.1 134 56.0
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 1.6e-33 147.1 101 70.3
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 2.1e-33 146.7 102 69.6
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 2.8e-33 146.4 160 53.1
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 2.8e-33 146.4 134 57.5
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 3.6e-33 146.0 110 64.5
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 3.6e-33 146.0 171 48.5
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 4.8e-33 145.6 131 60.3
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 6.2e-33 145.2 101 68.3
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 6.2e-33 145.2 99 69.7
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 6.2e-33 145.2 99 68.7
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 8.1e-33 144.8 102 67.6
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.4e-32 144.1 111 64.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 4.0e-32 142.5 128 57.8
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 5.3e-32 142.1 101 67.3
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 9.0e-32 141.4 102 65.7
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 9.0e-32 141.4 131 55.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 9.0e-32 141.4 99 68.7
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.2e-31 141.0 107 67.3
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.2e-30 136.7 112 61.6
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.9e-30 135.6 122 56.6
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.4e-29 134.0 106 59.4
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 2.4e-29 133.3 101 65.3
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 6.9e-24 115.2 80 65.0
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.7e-22 110.5 74 68.9
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 8.4e-22 108.2 69 69.6
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 6.7e-19 98.6 164 37.8
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 1.9e-18 97.1 163 42.9
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 2.6e-15 86.7 77 54.5
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 4.2e-13 79.3 44 77.3
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 5.5e-13 79.0 54 66.7
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 3.5e-12 76.3 62 59.7
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.9e-06 56.6 44 52.3
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.8e-06 56.2 46 56.5


User provided reference genes

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