Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 3.3e-227 791.6 457 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 3.7e-77 293.1 469 43.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.3e-70 270.0 460 37.2
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 3.3e-70 270.0 456 37.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 3.3e-70 270.0 462 37.7
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.8e-69 266.9 456 37.3
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 4.8e-69 266.2 460 37.4
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 4.8e-69 266.2 456 36.2
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.8e-69 266.2 456 35.5
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 1.8e-68 264.2 456 36.0
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 1.8e-68 264.2 460 38.0
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.0e-68 263.1 456 35.3
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 6.9e-68 262.3 456 36.0
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 9.0e-68 261.9 455 35.6
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 9.0e-68 261.9 460 36.3
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.2e-67 261.5 456 36.0
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.4e-67 260.0 462 36.6
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 4.5e-67 259.6 456 36.4
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.5e-67 259.6 460 37.8
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.5e-67 259.6 456 37.7
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 5.8e-67 259.2 460 37.4
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 7.6e-67 258.8 456 37.9
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 1.7e-66 257.7 459 37.0
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 2.9e-66 256.9 460 37.0
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 2.9e-66 256.9 461 38.0
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 3.8e-66 256.5 460 36.1
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 8.4e-66 255.4 460 35.0
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.1e-65 255.0 460 36.7
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.9e-65 254.2 453 37.3
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.9e-65 254.2 455 35.8
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 3.2e-65 253.4 460 37.8
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 7.1e-65 252.3 453 36.4
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 1.2e-64 251.5 459 35.7
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.6e-64 251.1 484 33.5
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 2.1e-64 250.8 460 36.5
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.5e-64 250.0 460 35.4
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 3.5e-64 250.0 453 36.2
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 3.5e-64 250.0 453 36.4
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 3.5e-64 250.0 453 36.4
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.5e-64 250.0 453 36.2
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 4.6e-64 249.6 460 36.5
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 6.0e-64 249.2 456 36.8
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 7.9e-64 248.8 460 36.7
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 7.9e-64 248.8 461 35.1
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 7.9e-64 248.8 456 34.6
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 1.0e-63 248.4 456 35.5
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.3e-63 248.1 460 35.9
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 1.8e-63 247.7 482 34.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.8e-63 247.7 456 34.6
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.3e-63 247.3 460 36.1
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.3e-63 247.3 461 36.9
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 3.0e-63 246.9 460 35.4
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 3.0e-63 246.9 457 35.2
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 3.9e-63 246.5 460 36.1
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 5.1e-63 246.1 460 35.7
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 8.7e-63 245.4 459 35.1
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 8.7e-63 245.4 460 36.3
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 1.5e-62 244.6 460 35.9
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.9e-62 244.2 512 33.0
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 2.5e-62 243.8 354 39.3
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 2.5e-62 243.8 460 35.4
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 3.3e-62 243.4 460 35.2
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 3.3e-62 243.4 461 36.4
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 3.3e-62 243.4 460 35.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 3.3e-62 243.4 452 35.2
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 3.3e-62 243.4 460 33.9
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 3.3e-62 243.4 460 35.4
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 3.3e-62 243.4 460 35.4
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 4.3e-62 243.0 488 34.4
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 5.7e-62 242.7 460 40.2
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 5.7e-62 242.7 460 35.9
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 5.7e-62 242.7 460 33.9
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 7.4e-62 242.3 460 35.2
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 9.7e-62 241.9 460 35.2
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 1.3e-61 241.5 468 34.2
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.2e-61 240.7 460 35.4
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 2.8e-61 240.4 477 35.8
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 8.2e-61 238.8 460 36.1
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.1e-60 238.4 460 33.5
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.8e-60 237.7 468 34.6
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 2.4e-60 237.3 479 34.7
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 6.9e-60 235.7 329 44.1
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.5e-59 234.6 460 34.3
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 2.6e-59 233.8 445 34.8
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 5.9e-59 232.6 460 36.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.3e-58 231.5 462 34.0
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 2.2e-58 230.7 459 35.1
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 2.9e-58 230.3 456 33.6
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 8.5e-58 228.8 456 34.0
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 2.5e-57 227.3 462 33.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 7.2e-57 225.7 460 32.8
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.7e-56 223.8 333 39.9
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.7e-56 223.8 324 40.1
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.0e-55 221.9 476 33.2
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 1.4e-55 221.5 327 41.3
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 1.4e-55 221.5 456 33.6
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 3.0e-55 220.3 480 33.3
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 7.4e-54 215.7 460 33.3
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-52 210.7 483 32.1
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 4.1e-52 209.9 403 35.0
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 1.0e-50 205.3 306 38.9
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 6.5e-50 202.6 309 39.8
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.4e-49 201.4 536 30.0
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.4e-49 201.4 459 32.2
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.4e-44 184.1 460 29.6
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 3.1e-44 183.7 460 32.0
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 1.5e-43 181.4 460 32.2
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.8e-42 176.8 459 29.2
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.7e-34 151.4 140 56.4
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 4.7e-32 143.3 268 34.3
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.9e-26 124.0 177 39.0
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.2e-25 120.2 177 38.4
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.2e-25 119.4 177 38.4
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.4e-22 110.2 130 43.1
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 4.8e-21 106.7 174 36.2
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.9e-19 99.8 132 37.9
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.3e-18 97.8 126 40.5
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 9.8e-14 82.4 181 32.6
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 3.8e-10 70.5 154 34.4
Cfa024070 Carpinus fangiana HOM05D003480 ORTHO05D004425 5.0e-10 70.1 181 27.6
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 4.4e-06 57.0 151 27.8


User provided reference genes

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