Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 5.0e-149 531.2 285 100.0
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.3e-108 395.6 255 82.4
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 1.2e-102 377.1 257 76.7
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 8.6e-101 370.9 265 72.1
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 8.6e-101 370.9 280 68.6
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.1e-100 370.5 264 72.3
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.1e-100 370.5 265 72.8
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 2.5e-100 369.4 258 73.6
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.3e-100 369.0 256 73.4
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 3.3e-100 369.0 265 72.5
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 5.6e-100 368.2 259 72.6
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 5.6e-100 368.2 262 74.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 7.3e-100 367.9 258 74.0
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 9.5e-100 367.5 258 74.4
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.2e-99 367.1 260 73.1
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.6e-99 366.7 258 73.3
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 2.1e-99 366.3 254 74.4
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 2.1e-99 366.3 276 69.6
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 2.1e-99 366.3 260 72.7
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 2.8e-99 365.9 260 73.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 2.8e-99 365.9 258 74.4
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 3.6e-99 365.5 258 74.0
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 3.6e-99 365.5 258 74.4
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 4.7e-99 365.2 258 73.3
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 4.7e-99 365.2 258 73.3
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.7e-99 365.2 254 75.2
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 4.7e-99 365.2 253 75.1
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 4.7e-99 365.2 260 72.3
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 6.2e-99 364.8 276 69.9
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 8.0e-99 364.4 262 73.3
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 8.0e-99 364.4 254 74.8
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.1e-98 364.0 262 72.9
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.4e-98 363.6 276 69.6
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 1.4e-98 363.6 258 73.6
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.4e-98 363.6 262 71.8
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.8e-98 363.2 254 72.8
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 1.8e-98 363.2 276 69.2
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.3e-98 362.8 257 73.5
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 2.3e-98 362.8 258 71.7
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.1e-98 362.5 262 72.9
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 4.0e-98 362.1 253 72.7
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 4.0e-98 362.1 253 73.9
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 8.9e-98 360.9 254 74.0
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 8.9e-98 360.9 253 74.7
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 1.5e-97 360.1 254 73.6
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.5e-97 360.1 262 72.5
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.5e-97 360.1 262 72.1
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 2.6e-97 359.4 265 70.9
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 3.4e-97 359.0 262 71.8
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 3.4e-97 359.0 261 71.6
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 3.4e-97 359.0 262 71.8
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.4e-97 359.0 256 70.3
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 5.8e-97 358.2 260 73.1
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 7.5e-97 357.8 258 72.5
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 7.5e-97 357.8 253 73.1
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 1.3e-96 357.1 254 72.0
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.7e-96 356.7 258 72.1
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 2.2e-96 356.3 275 70.2
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 2.2e-96 356.3 274 68.6
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 2.9e-96 355.9 257 71.2
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 2.9e-96 355.9 257 71.2
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 3.7e-96 355.5 258 72.9
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 6.4e-96 354.8 284 65.5
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 6.4e-96 354.8 253 72.7
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 6.4e-96 354.8 273 68.1
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 8.3e-96 354.4 257 70.8
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 8.3e-96 354.4 262 70.6
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 1.1e-95 354.0 268 68.3
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.1e-95 354.0 258 70.9
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.4e-95 353.6 264 69.3
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.9e-95 353.2 262 69.5
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 3.2e-95 352.4 257 71.2
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 5.4e-95 351.7 257 70.4
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 5.4e-95 351.7 257 70.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 5.4e-95 351.7 258 70.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 7.0e-95 351.3 261 70.1
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 9.2e-95 350.9 257 70.8
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 9.2e-95 350.9 260 71.2
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 9.2e-95 350.9 263 69.2
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 9.2e-95 350.9 260 70.0
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.2e-94 350.5 249 73.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.2e-94 350.5 264 68.6
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.6e-94 350.1 261 69.7
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.6e-94 350.1 261 70.1
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 2.1e-94 349.7 253 71.9
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 2.1e-94 349.7 255 70.2
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 3.5e-94 349.0 241 74.3
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 4.6e-94 348.6 249 72.7
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 6.0e-94 348.2 249 73.1
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 7.8e-94 347.8 248 71.4
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 7.8e-94 347.8 253 70.4
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 7.8e-94 347.8 249 73.9
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.7e-93 346.7 253 71.1
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 2.3e-93 346.3 253 71.1
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 3.9e-93 345.5 253 71.1
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 3.9e-93 345.5 253 71.1
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 3.9e-93 345.5 253 71.1
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.1e-92 344.0 249 70.7
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.1e-92 344.0 257 69.3
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 2.5e-92 342.8 270 65.9
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 5.6e-92 341.7 278 67.3
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.1e-91 339.7 248 69.8
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.8e-90 336.7 261 64.8
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 5.2e-90 335.1 257 68.9
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 2.6e-89 332.8 284 64.8
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 6.4e-88 328.2 237 72.6
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 8.3e-88 327.8 225 75.6
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.4e-87 327.0 279 64.9
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 3.2e-87 325.9 225 74.7
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.1e-87 325.5 269 62.5
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 7.8e-86 321.2 260 68.5
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.1e-85 318.5 255 62.7
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 1.8e-82 310.1 255 61.6
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.3e-77 293.9 254 61.0
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.5e-73 280.4 211 70.6
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 2.9e-72 276.2 211 68.2
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-68 264.2 256 53.9
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.5e-57 225.7 179 64.8
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 2.9e-56 223.0 149 77.2
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.2e-55 219.2 265 51.3
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.3e-53 214.2 156 71.8
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 3.9e-53 212.6 250 45.2
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.1e-50 203.0 154 70.8
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 9.0e-50 201.4 241 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.3e-45 186.8 237 43.5
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.7e-38 163.3 258 43.4
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.2e-35 153.7 240 38.3
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.4e-31 141.0 95 72.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.4e-26 124.4 98 68.4
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 7.0e-26 122.1 77 80.5
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.9e-24 116.7 75 78.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 5.5e-23 112.5 240 35.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 2.1e-22 110.5 119 53.8
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 2.2e-16 90.5 100 51.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.6e-09 67.8 42 81.0


User provided reference genes

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