Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0097s0057 Marchantia polymorpha HOM05D022173 ORTHO05D008520 6.3e-170 601.3 458 100.0
Pp3c1_29380 Physcomitrium patens HOM05D022173 ORTHO05D008520 1.2e-27 128.6 461 52.5
SEGI_20318 Sequoiadendron giganteum HOM05D022173 ORTHO05D008520 1.7e-21 108.2 426 55.6
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 2.9e-13 80.9 210 29.5
SMO137G0012 Selaginella moellendorffii HOM05D022173 ORTHO05D008520 2.9e-13 80.9 216 31.5
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 3.2e-12 77.4 246 28.5
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 3.5e-11 73.9 319 26.3
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.3e-10 72.0 228 29.8
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 1.7e-10 71.6 260 26.9
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 5.0e-10 70.1 272 29.8
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 8.6e-10 69.3 250 26.4
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 1.1e-09 68.9 253 26.5
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.1e-09 68.9 188 28.7
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.1e-09 68.9 318 25.5
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 2.5e-09 67.8 249 27.7
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 4.3e-09 67.0 278 26.3
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 1.6e-08 65.1 244 29.5
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.8e-08 64.3 89 37.1
CBR_g45402 Chara braunii HOM05D022173 ORTHO05D008520 2.8e-08 64.3 120 36.7
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 2.8e-08 64.3 123 35.0
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 3.6e-08 63.9 258 26.4
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 4.7e-08 63.5 247 26.3
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 1.1e-07 62.4 285 28.1
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 1.1e-07 62.4 206 27.2
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.4e-07 62.0 282 25.5
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.4e-07 62.0 282 25.5
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 2.3e-07 61.2 123 33.3
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 2.3e-07 61.2 219 25.1
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.1e-07 60.8 246 26.8
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 4.0e-07 60.5 221 28.1
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 4.0e-07 60.5 214 25.7
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 5.2e-07 60.1 290 23.4
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 5.2e-07 60.1 119 33.6
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 5.2e-07 60.1 97 41.2
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 6.8e-07 59.7 266 26.7
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.2e-06 58.9 269 25.7
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.2e-06 58.9 184 26.6
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 1.5e-06 58.5 208 25.5
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 2.6e-06 57.8 227 24.2
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 2.6e-06 57.8 222 27.0
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 2.6e-06 57.8 215 27.9
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 3.4e-06 57.4 344 24.4
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 4.4e-06 57.0 266 24.1
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 4.4e-06 57.0 277 25.3
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 5.8e-06 56.6 89 37.1
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 7.5e-06 56.2 264 24.2
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.5e-06 56.2 184 26.6
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 7.5e-06 56.2 235 25.1
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 7.5e-06 56.2 167 27.5


User provided reference genes

Program Settings