Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 0.0e+00 1912.9 1023 100.0
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.7e-58 232.3 195 60.5
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 4.4e-54 217.6 452 36.1
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 9.7e-54 216.5 222 51.8
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.3e-53 216.1 276 47.1
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 3.1e-52 211.5 206 52.4
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 3.1e-52 211.5 283 43.8
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 4.1e-52 211.1 302 41.4
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 4.1e-52 211.1 302 41.4
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.2e-51 209.5 218 49.1
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 2.0e-51 208.8 314 42.7
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 1.0e-50 206.5 342 40.1
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 1.3e-50 206.1 554 33.6
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.7e-50 205.7 197 51.3
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 2.2e-50 205.3 264 44.7
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 2.9e-50 204.9 241 46.9
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 2.9e-50 204.9 252 44.4
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 3.8e-50 204.5 312 40.1
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 5.0e-50 204.1 262 47.7
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 5.0e-50 204.1 218 48.6
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 6.5e-50 203.8 298 40.3
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 1.1e-49 203.0 197 51.3
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.5e-49 202.6 312 40.1
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.5e-49 202.6 205 51.2
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.9e-49 202.2 262 43.9
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.9e-49 202.2 250 47.6
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.9e-49 202.2 555 35.0
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 2.5e-49 201.8 259 43.2
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 4.2e-49 201.1 327 40.1
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 4.2e-49 201.1 494 33.0
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 7.2e-49 200.3 261 44.1
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.2e-48 199.5 181 52.5
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.2e-48 199.5 557 33.2
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 2.1e-48 198.7 197 50.8
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 2.1e-48 198.7 254 44.1
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.7e-48 198.4 362 39.5
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 3.6e-48 198.0 335 38.2
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 3.6e-48 198.0 589 33.1
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 3.6e-48 198.0 188 54.3
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 4.7e-48 197.6 264 42.8
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 4.7e-48 197.6 219 47.5
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 4.7e-48 197.6 498 33.7
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 6.1e-48 197.2 209 47.8
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 6.1e-48 197.2 321 40.5
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.0e-48 196.8 343 37.6
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.0e-47 196.4 243 43.6
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.4e-47 196.1 197 49.2
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.4e-47 196.1 197 49.2
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.4e-47 196.1 241 45.2
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 2.3e-47 195.3 222 45.9
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 2.3e-47 195.3 494 33.0
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 4.0e-47 194.5 553 32.9
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 4.0e-47 194.5 279 42.3
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 5.2e-47 194.1 248 43.1
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 5.2e-47 194.1 251 43.8
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 5.2e-47 194.1 242 44.6
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 8.8e-47 193.4 487 32.4
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 1.2e-46 193.0 327 40.7
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.5e-46 192.6 202 47.0
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 2.0e-46 192.2 248 42.7
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.6e-46 191.8 254 43.7
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 3.3e-46 191.4 519 33.9
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 5.7e-46 190.7 646 30.8
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 7.5e-46 190.3 337 38.3
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 9.7e-46 189.9 236 44.5
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 9.7e-46 189.9 342 37.7
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 9.7e-46 189.9 249 41.8
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 9.7e-46 189.9 316 38.6
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.3e-45 189.5 644 30.7
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 1.3e-45 189.5 330 37.9
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.3e-45 189.5 371 38.0
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.7e-45 189.1 554 31.8
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 1.7e-45 189.1 336 38.4
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.7e-45 189.1 316 38.6
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 1.7e-45 189.1 236 45.3
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.2e-45 188.7 212 44.8
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 2.2e-45 188.7 272 39.7
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 2.8e-45 188.3 316 37.3
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 2.8e-45 188.3 311 38.3
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 3.7e-45 188.0 283 39.9
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 3.7e-45 188.0 330 37.3
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 6.3e-45 187.2 272 39.3
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 8.3e-45 186.8 241 45.2
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 1.1e-44 186.4 343 37.0
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 1.1e-44 186.4 206 46.6
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.4e-44 186.0 304 38.8
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.8e-44 185.7 545 32.3
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.8e-44 185.7 342 36.5
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 2.4e-44 185.3 343 37.0
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 3.1e-44 184.9 346 39.0
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 5.3e-44 184.1 203 43.3
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 5.3e-44 184.1 218 45.4
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 9.1e-44 183.3 468 34.8
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 1.2e-43 183.0 307 37.1
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 3.5e-43 181.4 249 41.8
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 4.5e-43 181.0 578 29.9
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 4.5e-43 181.0 258 42.2
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.7e-42 179.1 327 34.3
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 2.2e-42 178.7 261 40.6
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 2.9e-42 178.3 274 41.2
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 2.5e-41 175.3 294 37.8
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 6.1e-40 170.6 258 39.9
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 6.1e-40 170.6 315 35.6
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.4e-39 169.5 635 30.4
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 5.2e-39 167.5 518 32.0
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 8.8e-39 166.8 604 30.8
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 2.0e-38 165.6 540 32.6
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 4.8e-37 161.0 307 35.2
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 5.4e-36 157.5 271 36.9
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 2.0e-35 155.6 370 31.6
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 7.7e-35 153.7 168 51.8
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 5.5e-33 147.5 499 32.1
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.2e-32 146.4 383 32.9
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 2.1e-32 145.6 474 34.8
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 4.7e-32 144.4 297 37.0
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 5.8e-22 110.9 233 37.3
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 1.1e-20 106.7 87 56.3
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 4.1e-20 104.8 87 56.3
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 9.2e-20 103.6 87 56.3
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 2.7e-19 102.1 85 55.3
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 3.5e-19 101.7 133 44.4
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 5.0e-18 97.8 87 51.7
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 5.0e-18 97.8 157 40.8
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 7.3e-17 94.0 77 58.4
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 1.1e-15 90.1 131 41.2
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 1.4e-15 89.7 248 31.9
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.4e-15 89.7 81 51.9
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 2.3e-15 89.0 284 32.0
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 3.1e-15 88.6 104 42.3
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.0e-14 85.9 136 41.2
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.4e-12 79.7 226 33.6
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 3.0e-10 72.0 215 30.7
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 1.1e-09 70.1 73 43.8
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.9e-09 69.3 71 46.5
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 2.0e-06 59.3 69 44.9


User provided reference genes

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