Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 1.7e-58 229.2 120 100.0
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 8.3e-21 104.0 127 48.8
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 2.4e-20 102.4 90 62.2
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.0e-19 99.4 102 57.8
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 7.7e-19 97.4 109 47.7
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 1.7e-18 96.3 80 58.8
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 1.7e-18 96.3 102 52.0
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 2.2e-18 95.9 85 57.6
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 2.2e-18 95.9 82 59.8
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 2.9e-18 95.5 97 57.7
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 3.8e-18 95.1 74 66.2
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 5.0e-18 94.7 86 59.3
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 8.5e-18 94.0 85 58.8
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-17 92.8 96 52.1
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 1.9e-17 92.8 96 52.1
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 1.9e-17 92.8 86 59.3
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 2.5e-17 92.4 103 51.5
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 2.5e-17 92.4 88 53.4
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 3.2e-17 92.0 82 52.4
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 3.2e-17 92.0 83 57.8
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 4.2e-17 91.7 100 53.0
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 4.2e-17 91.7 83 55.4
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 5.5e-17 91.3 73 61.6
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 5.5e-17 91.3 82 59.8
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 7.2e-17 90.9 98 51.0
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 9.4e-17 90.5 120 45.0
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 1.2e-16 90.1 89 48.3
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 1.2e-16 90.1 74 59.5
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.2e-16 90.1 106 50.0
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 1.6e-16 89.7 106 48.1
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 2.1e-16 89.4 86 52.3
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 2.1e-16 89.4 91 52.7
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 2.1e-16 89.4 102 45.1
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 2.7e-16 89.0 83 56.6
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 3.6e-16 88.6 98 49.0
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 3.6e-16 88.6 117 44.4
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 4.7e-16 88.2 75 57.3
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 4.7e-16 88.2 100 45.0
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 4.7e-16 88.2 76 55.3
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 4.7e-16 88.2 72 56.9
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 4.7e-16 88.2 74 58.1
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 6.1e-16 87.8 124 50.8
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 6.1e-16 87.8 89 50.6
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 6.1e-16 87.8 74 58.1
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 8.0e-16 87.4 73 58.9
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 1.0e-15 87.0 84 52.4
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 1.0e-15 87.0 85 51.8
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 1.0e-15 87.0 85 54.1
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 1.0e-15 87.0 85 54.1
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 1.0e-15 87.0 100 49.0
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 1.0e-15 87.0 90 52.2
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 1.0e-15 87.0 108 49.1
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 1.4e-15 86.7 84 48.8
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 1.8e-15 86.3 117 45.3
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 1.8e-15 86.3 86 52.3
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 1.8e-15 86.3 106 46.2
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 1.8e-15 86.3 85 49.4
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 1.8e-15 86.3 84 50.0
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 1.8e-15 86.3 99 48.5
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 2.3e-15 85.9 90 51.1
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.3e-15 85.9 85 52.9
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.3e-15 85.9 76 53.9
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 2.3e-15 85.9 86 54.7
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 2.3e-15 85.9 73 58.9
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 3.0e-15 85.5 75 54.7
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 3.0e-15 85.5 86 53.5
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 3.0e-15 85.5 100 46.0
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 3.0e-15 85.5 87 51.7
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 3.0e-15 85.5 74 55.4
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 4.0e-15 85.1 76 53.9
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 4.0e-15 85.1 75 54.7
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 4.0e-15 85.1 76 53.9
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 4.0e-15 85.1 76 53.9
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 4.0e-15 85.1 102 43.1
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 4.0e-15 85.1 86 51.2
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 4.0e-15 85.1 86 51.2
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 4.0e-15 85.1 81 55.6
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 4.0e-15 85.1 109 46.8
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 5.2e-15 84.7 75 54.7
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 5.2e-15 84.7 76 55.3
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 5.2e-15 84.7 98 43.9
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 5.2e-15 84.7 100 46.0
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 5.2e-15 84.7 100 46.0
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 6.8e-15 84.3 88 50.0
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 6.8e-15 84.3 77 57.1
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 8.8e-15 84.0 75 53.3
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 8.8e-15 84.0 82 52.4
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 1.5e-14 83.2 76 53.9
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.5e-14 83.2 100 45.0
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 1.5e-14 83.2 79 51.9
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 2.0e-14 82.8 76 53.9
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 2.0e-14 82.8 75 52.0
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 2.6e-14 82.4 83 49.4
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 2.6e-14 82.4 69 56.5
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.4e-14 82.0 81 51.9
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 4.4e-14 81.6 82 48.8
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.4e-14 81.6 100 44.0
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 4.4e-14 81.6 106 48.1
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 4.4e-14 81.6 70 57.1
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 7.5e-14 80.9 80 50.0
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 1.7e-13 79.7 81 54.3
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 3.7e-13 78.6 99 45.5
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 1.4e-12 76.6 66 59.1
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 3.1e-12 75.5 87 47.1
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 5.4e-12 74.7 66 51.5
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 7.0e-12 74.3 60 58.3
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 4.5e-11 71.6 58 60.3
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 5.0e-10 68.2 45 66.7
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 5.0e-10 68.2 60 55.0
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 5.0e-10 68.2 60 55.0
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 5.0e-10 68.2 60 55.0
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 6.6e-10 67.8 57 54.4
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 8.6e-10 67.4 60 56.7
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 1.5e-09 66.6 64 54.7
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 5.2e-07 58.2 54 51.9
Hma1.2p1_0816F.1_g222980 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 5.7e-06 54.7 58 48.3


User provided reference genes

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