Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0096s0043 Marchantia polymorpha HOM05D005804 ORTHO05D006849 2.2e-100 369.0 188 100.0
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 6.8e-30 134.8 164 51.2
SEGI_03962 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.4e-29 132.1 181 44.2
SEGI_29979 Sequoiadendron giganteum HOM05D005804 ORTHO05D006849 4.4e-29 132.1 181 44.2
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 2.9e-28 129.4 158 51.9
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 1.6e-23 113.6 160 45.0
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 1.6e-23 113.6 151 47.7
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 4.7e-23 112.1 140 50.7
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 4.7e-23 112.1 167 43.1
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 6.2e-23 111.7 140 50.7
Gohir.D07G055466 Gossypium hirsutum HOM05D005804 ORTHO05D006849 6.2e-23 111.7 163 43.6
Manes.14G051001 Manihot esculenta HOM05D005804 ORTHO05D006849 6.2e-23 111.7 156 45.5
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.1e-22 110.9 151 47.7
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 1.4e-22 110.5 160 43.1
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 1.8e-22 110.2 181 44.8
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.8e-22 110.2 138 50.0
RcHm_v2.0_Chr7g0190081 Rosa chinensis HOM05D005804 ORTHO05D006849 1.8e-22 110.2 149 47.0
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 2.4e-22 109.8 155 45.2
Gohir.A07G051066 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.4e-22 109.8 162 43.8
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 2.4e-22 109.8 148 47.3
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 3.1e-22 109.4 145 46.9
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 3.1e-22 109.4 155 46.5
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 3.1e-22 109.4 139 48.9
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 4.0e-22 109.0 174 42.5
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 4.0e-22 109.0 140 46.4
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 4.0e-22 109.0 169 42.6
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 6.9e-22 108.2 158 45.6
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 9.0e-22 107.8 161 44.1
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 9.0e-22 107.8 139 50.4
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 9.0e-22 107.8 139 50.4
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.2e-21 107.5 179 44.7
CSS0012660 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 1.5e-21 107.1 138 47.8
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.5e-21 107.1 149 49.0
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 1.5e-21 107.1 180 42.8
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 1.5e-21 107.1 151 43.7
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 2.0e-21 106.7 174 43.7
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 2.0e-21 106.7 147 50.3
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 4.4e-21 105.5 153 45.1
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 4.4e-21 105.5 141 48.2
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 5.8e-21 105.1 178 42.7
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 5.8e-21 105.1 178 42.7
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 7.6e-21 104.8 146 48.6
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 7.6e-21 104.8 150 48.7
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 1.3e-20 104.0 148 45.3
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.3e-20 104.0 141 48.2
Lalb_Chr08g0237201 Lupinus albus HOM05D005804 ORTHO05D006849 1.3e-20 104.0 147 43.5
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 1.3e-20 104.0 140 43.6
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 1.3e-20 104.0 138 49.3
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.3e-20 104.0 145 45.5
Carub.0007s1616 Capsella rubella HOM05D005804 ORTHO05D006849 1.7e-20 103.6 141 46.1
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 1.7e-20 103.6 187 40.1
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 2.2e-20 103.2 149 48.3
Medtr2g045235 Medicago truncatula HOM05D005804 ORTHO05D006849 2.2e-20 103.2 178 42.1
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.9e-20 102.8 138 46.4
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 3.8e-20 102.4 146 49.3
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 4.9e-20 102.1 145 48.3
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 4.9e-20 102.1 147 45.6
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 4.9e-20 102.1 146 43.8
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 6.4e-20 101.7 164 40.9
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 6.4e-20 101.7 139 46.8
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 8.4e-20 101.3 183 41.0
Eucgr.K02724 Eucalyptus grandis HOM05D005804 ORTHO05D006849 8.4e-20 101.3 155 42.6
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.1e-19 100.9 141 48.9
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.4e-19 100.5 139 47.5
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.4e-19 100.5 144 45.1
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.9e-19 100.1 138 45.7
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 1.9e-19 100.1 139 45.3
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.9e-19 100.1 150 44.0
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 2.4e-19 99.8 163 39.3
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 2.4e-19 99.8 143 47.6
ATR0178G002 Amborella trichopoda HOM05D005804 ORTHO05D006849 5.4e-19 98.6 186 40.3
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 5.4e-19 98.6 151 41.7
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 7.1e-19 98.2 153 41.8
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 9.3e-19 97.8 143 45.5
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 9.3e-19 97.8 143 44.1
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 9.3e-19 97.8 139 45.3
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 1.2e-18 97.4 110 46.4
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 1.2e-18 97.4 135 48.9
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 1.6e-18 97.1 139 48.2
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 1.6e-18 97.1 158 40.5
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 2.1e-18 96.7 144 43.8
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.1e-18 96.7 160 42.5
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 2.7e-18 96.3 142 43.7
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 2.7e-18 96.3 146 43.8
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 3.5e-18 95.9 153 41.2
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 3.5e-18 95.9 149 40.9
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 4.6e-18 95.5 155 41.9
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 4.6e-18 95.5 117 51.3
CBR_g12751 Chara braunii HOM05D005804 ORTHO05D006849 4.6e-18 95.5 169 40.2
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 6.0e-18 95.1 154 42.2
CARHR232300 Cardamine hirsuta HOM05D005804 ORTHO05D006849 6.0e-18 95.1 153 41.8
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 1.3e-17 94.0 138 47.8
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.7e-17 93.6 174 38.5
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 1.7e-17 93.6 139 46.0
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 2.3e-17 93.2 140 42.1
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 3.0e-17 92.8 153 39.9
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 3.9e-17 92.4 138 44.9
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 5.1e-17 92.0 139 44.6
SMO133G0032 Selaginella moellendorffii HOM05D005804 ORTHO05D006849 8.7e-17 91.3 166 38.0
CDE05G3468 Ceratophyllum demersum HOM05D005804 ORTHO05D006849 2.5e-16 89.7 137 41.6
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 2.5e-16 89.7 154 40.9
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 9.6e-16 87.8 140 41.4
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 2.1e-15 86.7 167 38.9
vmacro16720 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 4.8e-15 85.5 147 37.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.1e-14 84.3 192 34.4
Zm00001eb317740 Zea mays HOM05D005804 ORTHO05D006849 4.0e-14 82.4 110 45.5
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 4.5e-13 79.0 143 38.5
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 1.4e-11 73.9 97 46.4
Dinv11175 Davidia involucrata HOM05D005804 ORTHO05D006849 4.6e-10 68.9 133 37.6


User provided reference genes

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