Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 1.4e-131 473.0 244 100.0
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 1.0e-46 191.0 266 47.7
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.2e-42 177.6 247 48.6
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 2.9e-41 172.9 257 44.7
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.6e-41 171.4 259 45.9
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.6e-41 171.4 259 45.9
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 5.5e-40 168.7 251 44.2
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.2e-39 167.5 263 43.3
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.8e-38 163.7 250 44.4
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.3e-38 163.3 260 41.2
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 8.9e-38 161.4 264 43.2
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 1.5e-37 160.6 264 41.7
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.0e-37 160.2 271 43.9
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 5.7e-37 158.7 260 43.5
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 7.5e-37 158.3 221 47.5
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 7.5e-37 158.3 267 41.9
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 9.8e-37 157.9 265 42.6
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.3e-36 157.5 267 43.4
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 1.7e-36 157.1 264 43.2
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.2e-36 156.8 265 41.1
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.8e-36 156.4 269 43.5
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 2.8e-36 156.4 269 43.5
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 3.7e-36 156.0 264 42.8
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 4.9e-36 155.6 258 42.2
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 8.3e-36 154.8 264 42.0
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 1.1e-35 154.5 262 42.0
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 1.1e-35 154.5 208 46.6
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.8e-35 153.7 261 41.0
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 1.8e-35 153.7 222 45.5
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.8e-35 153.7 261 41.0
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 2.4e-35 153.3 262 44.3
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 4.1e-35 152.5 211 46.0
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 5.4e-35 152.1 261 41.4
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 7.0e-35 151.8 257 41.6
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 7.0e-35 151.8 212 44.3
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 9.2e-35 151.4 259 44.0
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 1.2e-34 151.0 263 40.3
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 1.6e-34 150.6 265 40.8
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 2.0e-34 150.2 285 40.7
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 2.7e-34 149.8 248 41.9
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 2.7e-34 149.8 271 42.1
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 3.5e-34 149.4 262 41.2
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 3.5e-34 149.4 267 41.2
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 3.5e-34 149.4 262 40.8
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 3.5e-34 149.4 263 40.3
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 3.5e-34 149.4 206 47.1
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 5.9e-34 148.7 205 45.9
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 5.9e-34 148.7 205 45.9
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 5.9e-34 148.7 261 43.3
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 5.9e-34 148.7 260 40.4
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 7.8e-34 148.3 265 40.4
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 7.8e-34 148.3 259 40.5
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.0e-33 147.9 264 42.4
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 1.3e-33 147.5 265 41.5
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 1.3e-33 147.5 250 41.2
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.3e-33 147.5 209 45.0
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.3e-33 147.5 212 44.8
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 2.3e-33 146.7 252 41.7
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 2.3e-33 146.7 216 44.9
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 2.9e-33 146.4 208 44.7
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 3.8e-33 146.0 267 41.2
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 3.8e-33 146.0 257 39.3
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 5.0e-33 145.6 259 41.7
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 6.6e-33 145.2 250 41.6
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 6.6e-33 145.2 262 41.2
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 8.6e-33 144.8 248 41.9
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 1.1e-32 144.4 232 43.5
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 1.1e-32 144.4 264 39.0
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 1.1e-32 144.4 259 41.3
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 1.5e-32 144.1 258 39.5
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 3.3e-32 142.9 250 40.8
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 4.3e-32 142.5 257 42.0
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 9.5e-32 141.4 250 41.6
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 1.2e-31 141.0 257 39.3
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 1.6e-31 140.6 258 40.3
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 1.6e-31 140.6 282 40.4
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 2.1e-31 140.2 207 45.9
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 2.8e-31 139.8 267 39.0
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 6.1e-31 138.7 258 39.9
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 8.0e-31 138.3 258 39.9
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 8.0e-31 138.3 255 40.4
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 1.0e-30 137.9 258 39.9
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 1.4e-30 137.5 252 39.7
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 3.1e-30 136.3 266 40.2
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 3.1e-30 136.3 271 41.0
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 4.0e-30 136.0 260 39.2
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 5.2e-30 135.6 214 42.1
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 5.2e-30 135.6 203 44.3
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 6.8e-30 135.2 150 54.0
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 6.8e-30 135.2 201 46.3
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 8.9e-30 134.8 143 55.9
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 8.9e-30 134.8 302 36.8
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 2.0e-29 133.7 238 39.9
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 2.6e-29 133.3 241 41.9
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 3.4e-29 132.9 242 40.5
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 3.4e-29 132.9 242 40.5
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 7.5e-29 131.7 266 40.6
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 9.8e-29 131.3 198 44.9
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 4.9e-28 129.0 204 43.1
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 8.3e-28 128.3 291 36.4
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-27 127.9 144 52.1
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-27 127.9 144 52.8
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 1.9e-27 127.1 141 55.3
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 3.2e-27 126.3 256 38.7
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 2.0e-26 123.6 253 38.3
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 2.7e-26 123.2 240 39.2
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 2.7e-26 123.2 198 41.9
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 3.5e-26 122.9 240 38.8
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 6.0e-26 122.1 240 39.6
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 6.0e-26 122.1 240 38.8
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 9.5e-24 114.8 130 52.3
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 1.2e-23 114.4 252 37.7
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 3.6e-23 112.8 234 37.2
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 1.1e-22 111.3 209 37.8
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 9.8e-21 104.8 267 34.5
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 2.2e-20 103.6 131 47.3
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.6e-18 97.4 208 35.1
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.7e-17 94.0 79 65.8
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 2.5e-16 90.1 204 38.2
CBR_g47116 Chara braunii HOM05D005104 ORTHO05D006614 5.6e-16 89.0 219 33.3
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 4.7e-15 85.9 83 56.6
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 3.1e-06 56.6 174 31.6
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 5.2e-06 55.8 183 30.1
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 6.8e-06 55.5 187 31.0
Cre12.g509300 Chlamydomonas reinhardtii HOM05D005104 ORTHO05D006614 6.8e-06 55.5 196 31.1


User provided reference genes

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