Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 8.0e-150 533.9 299 100.0
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 1.2e-15 88.2 205 29.8
Pp3c6_3400 Physcomitrium patens HOM05D005423 ORTHO05D006223 2.7e-12 77.0 157 32.5
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 6.0e-12 75.9 143 35.7
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 1.9e-10 70.9 199 34.2
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 1.9e-10 70.9 224 30.4
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 2.5e-10 70.5 154 33.8
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 5.6e-10 69.3 145 32.4
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 7.3e-10 68.9 199 28.6
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 2.1e-09 67.4 166 29.5
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 3.6e-09 66.6 131 34.4
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.8e-09 66.2 171 30.4
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.2e-09 65.9 238 28.2
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 1.1e-08 65.1 188 31.9
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 2.4e-08 63.9 123 33.3
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.4e-08 63.9 170 27.1
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 2.4e-08 63.9 193 30.6
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 3.1e-08 63.5 131 34.4
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 4.0e-08 63.2 199 28.6
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 2.0e-07 60.8 143 31.5
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 2.0e-07 60.8 145 30.3
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 3.4e-07 60.1 157 28.7
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 3.4e-07 60.1 131 29.8
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 4.4e-07 59.7 223 26.0
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 4.4e-07 59.7 218 27.5
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 7.6e-07 58.9 162 30.9
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 7.6e-07 58.9 198 31.3
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 7.6e-07 58.9 246 24.4
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 7.6e-07 58.9 153 28.8
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 9.9e-07 58.5 136 33.8
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.3e-06 58.2 214 29.9
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.7e-06 57.8 204 27.5
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 1.7e-06 57.8 127 33.9
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 1.7e-06 57.8 122 30.3
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 2.2e-06 57.4 185 28.1
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 2.9e-06 57.0 130 34.6
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 2.9e-06 57.0 125 32.8
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 2.9e-06 57.0 186 29.0
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 2.9e-06 57.0 122 32.0
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 2.9e-06 57.0 131 33.6
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 3.8e-06 56.6 155 27.7
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 3.8e-06 56.6 122 32.0
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 4.9e-06 56.2 150 30.0
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 4.9e-06 56.2 153 26.1
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 6.4e-06 55.8 102 34.3
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 6.4e-06 55.8 131 32.1
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 8.4e-06 55.5 157 28.0
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 8.4e-06 55.5 173 28.3
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 8.4e-06 55.5 136 32.4


User provided reference genes

Program Settings