Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 3.7e-157 558.1 279 100.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 1.3e-77 293.9 201 68.2
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 2.2e-61 240.0 182 59.3
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 2.7e-59 233.0 200 53.5
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 3.6e-59 232.6 198 56.6
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 4.7e-59 232.3 198 55.6
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 8.0e-59 231.5 269 47.2
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.8e-58 230.3 191 57.1
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 2.3e-58 229.9 192 57.3
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 2.3e-58 229.9 255 48.2
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 8.8e-58 228.0 189 57.7
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 8.8e-58 228.0 197 55.3
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 1.5e-57 227.3 200 54.5
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 2.0e-57 226.9 215 52.6
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.6e-57 226.5 192 56.8
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 2.6e-57 226.5 197 55.8
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 3.3e-57 226.1 198 55.6
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 3.3e-57 226.1 196 52.6
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 4.4e-57 225.7 197 55.3
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 4.4e-57 225.7 198 53.5
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 5.7e-57 225.3 202 52.5
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 5.7e-57 225.3 236 50.4
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 5.7e-57 225.3 201 55.2
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 7.5e-57 224.9 202 52.5
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 7.5e-57 224.9 197 53.8
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 7.5e-57 224.9 198 53.5
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 7.5e-57 224.9 197 56.3
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 9.7e-57 224.6 231 49.8
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 9.7e-57 224.6 198 54.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.3e-56 224.2 198 54.0
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.3e-56 224.2 198 54.0
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 1.7e-56 223.8 199 54.8
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 2.2e-56 223.4 191 56.0
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.8e-56 223.0 198 53.0
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.7e-56 222.6 242 49.2
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 4.8e-56 222.2 201 52.7
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 6.3e-56 221.9 203 53.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 6.3e-56 221.9 203 52.2
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 6.3e-56 221.9 205 51.2
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 6.3e-56 221.9 197 54.8
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 1.1e-55 221.1 197 53.8
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.1e-55 221.1 198 54.0
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 1.4e-55 220.7 178 59.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 1.4e-55 220.7 196 53.6
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 1.8e-55 220.3 149 72.5
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 1.8e-55 220.3 195 54.9
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 1.8e-55 220.3 267 45.3
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 1.8e-55 220.3 239 49.0
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 1.8e-55 220.3 203 52.2
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 3.1e-55 219.5 202 51.5
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 4.1e-55 219.2 197 53.3
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 4.1e-55 219.2 197 53.3
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.3e-55 218.8 203 53.2
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 5.3e-55 218.8 203 53.2
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 7.0e-55 218.4 205 52.7
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 7.0e-55 218.4 202 54.5
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 9.1e-55 218.0 202 50.5
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 9.1e-55 218.0 202 53.5
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 9.1e-55 218.0 196 53.6
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 1.2e-54 217.6 185 56.8
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.2e-54 217.6 206 51.9
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 1.2e-54 217.6 203 53.2
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 1.2e-54 217.6 197 53.3
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.6e-54 217.2 177 57.6
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.6e-54 217.2 196 54.1
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 1.6e-54 217.2 201 53.2
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 2.0e-54 216.9 199 53.8
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.7e-54 216.5 249 47.4
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 3.5e-54 216.1 193 52.3
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 3.5e-54 216.1 199 52.8
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 5.9e-54 215.3 196 54.1
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 7.7e-54 214.9 197 51.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 7.7e-54 214.9 203 50.2
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-53 214.5 259 44.8
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-53 214.5 259 44.8
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 1.0e-53 214.5 185 54.1
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 1.3e-53 214.2 206 50.5
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.7e-53 213.8 199 53.3
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 2.9e-53 213.0 248 47.2
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 3.8e-53 212.6 176 54.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 3.8e-53 212.6 206 51.9
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.5e-52 210.7 271 43.9
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 1.5e-52 210.7 196 53.1
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 1.5e-52 210.7 196 51.0
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 2.5e-52 209.9 269 42.8
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.5e-52 209.9 216 50.5
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 3.2e-52 209.5 218 49.5
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 3.2e-52 209.5 203 51.7
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 4.2e-52 209.1 204 50.0
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 1.6e-51 207.2 217 48.4
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.7e-51 206.5 201 50.7
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 2.7e-51 206.5 185 53.0
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 3.6e-51 206.1 177 53.7
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 6.1e-51 205.3 203 49.3
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 6.1e-51 205.3 193 49.7
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 8.0e-51 204.9 205 49.8
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.4e-47 193.4 135 61.5
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 2.4e-47 193.4 166 54.8
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.1e-47 193.0 198 48.5
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 9.1e-47 191.4 197 46.2
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 2.7e-46 189.9 133 60.9
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 1.3e-45 187.6 202 45.0
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.9e-44 183.7 134 60.4
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 8.3e-40 168.3 203 41.9
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.3e-40 168.3 185 45.9
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.9e-23 114.0 101 55.4
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.5e-12 77.8 70 48.6
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.9e-12 77.4 64 48.4
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 2.1e-11 73.9 59 49.2
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 3.6e-11 73.2 87 44.8
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 6.2e-11 72.4 72 45.8
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 4.9e-08 62.8 65 43.1


User provided reference genes

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