Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 5.6e-153 544.3 282 100.0
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.3e-48 197.6 278 42.8
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 1.4e-34 151.0 266 33.8
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 3.1e-34 149.8 213 41.8
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 7.6e-33 145.2 281 35.2
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 6.4e-32 142.1 278 34.2
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 8.4e-32 141.7 279 32.6
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.9e-31 140.6 279 35.5
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.4e-31 139.0 282 33.3
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 7.1e-31 138.7 204 38.2
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 7.1e-31 138.7 284 33.1
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 2.1e-30 137.1 281 34.2
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 4.6e-30 136.0 280 33.6
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 7.9e-30 135.2 273 34.8
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 5.1e-29 132.5 278 33.8
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 8.7e-29 131.7 209 35.9
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.9e-28 130.6 177 37.9
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 2.5e-28 130.2 277 33.6
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 3.3e-28 129.8 210 37.1
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 4.3e-28 129.4 273 33.7
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 2.1e-27 127.1 277 31.4
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 3.6e-27 126.3 274 32.1
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 4.8e-27 125.9 278 33.1
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 6.2e-27 125.6 277 31.4
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 1.1e-26 124.8 282 32.3
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.4e-26 124.4 273 30.0
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.4e-26 124.4 185 38.9
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.4e-26 124.4 286 31.1
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 1.4e-26 124.4 178 39.9
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 1.8e-26 124.0 279 33.0
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 3.1e-26 123.2 286 31.1
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 4.0e-26 122.9 284 32.0
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 5.3e-26 122.5 317 30.6
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 1.5e-25 120.9 273 31.9
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 2.0e-25 120.6 279 30.8
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 2.6e-25 120.2 178 36.5
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 5.8e-25 119.0 215 36.7
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 5.8e-25 119.0 193 36.3
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 5.8e-25 119.0 276 30.8
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 7.6e-25 118.6 183 33.9
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 9.9e-25 118.2 273 33.3
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.3e-24 117.9 279 30.5
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 1.7e-24 117.5 215 36.3
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 2.2e-24 117.1 185 36.2
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 2.2e-24 117.1 153 41.8
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.1e-23 114.8 213 32.4
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.4e-23 114.4 259 31.7
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 1.4e-23 114.4 231 31.6
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 1.9e-23 114.0 232 34.9
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.4e-23 113.6 286 30.8
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.4e-23 113.6 286 30.8
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 3.2e-23 113.2 275 30.2
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 3.2e-23 113.2 174 36.8
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 5.5e-23 112.5 185 36.2
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 7.1e-23 112.1 172 36.6
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 7.1e-23 112.1 184 35.9
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 9.3e-23 111.7 310 28.7
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 1.2e-22 111.3 284 31.7
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 2.1e-22 110.5 275 30.5
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 2.7e-22 110.2 281 32.0
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 2.7e-22 110.2 183 38.8
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 3.5e-22 109.8 184 37.0
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 3.5e-22 109.8 156 39.7
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 4.6e-22 109.4 180 35.6
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 7.9e-22 108.6 254 31.1
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 7.9e-22 108.6 279 30.1
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.0e-21 108.2 286 29.0
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.0e-21 108.2 279 30.1
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 1.3e-21 107.8 169 36.7
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 5.1e-21 105.9 267 29.6
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 6.7e-21 105.5 279 28.3
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 1.1e-20 104.8 273 30.0
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 1.9e-20 104.0 184 33.7
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 4.3e-20 102.8 185 33.5
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 7.4e-20 102.1 252 31.3
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 7.4e-20 102.1 274 28.5
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 9.6e-20 101.7 161 36.6
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 2.1e-19 100.5 273 30.4
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 2.1e-19 100.5 273 30.4
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 2.1e-19 100.5 273 30.4
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 3.7e-19 99.8 194 31.4
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 3.7e-19 99.8 279 29.4
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 6.2e-19 99.0 273 30.4
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 1.8e-18 97.4 273 30.0
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 4.0e-18 96.3 281 27.0
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 6.9e-18 95.5 184 33.7
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 1.2e-17 94.7 138 37.7
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 2.6e-17 93.6 253 30.4
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 7.6e-17 92.0 98 43.9
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 3.8e-16 89.7 106 44.3
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 3.2e-15 86.7 279 28.3
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 2.7e-14 83.6 181 32.0
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 6.0e-14 82.4 98 40.8
SMO143G0295 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 1.8e-13 80.9 187 31.6
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 3.0e-13 80.1 213 27.2
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 6.7e-13 79.0 136 30.9
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 8.7e-13 78.6 90 50.0
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 4.3e-12 76.3 117 34.2
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 9.6e-12 75.1 229 26.2
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 2.8e-11 73.6 216 31.0
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 1.4e-10 71.2 140 32.1
SMO197G0114 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 5.3e-10 69.3 190 27.9
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 2.0e-09 67.4 93 36.6
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 1.0e-08 65.1 144 34.0
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 1.3e-08 64.7 128 33.6
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 1.1e-07 61.6 113 29.2


User provided reference genes

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