Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 9.3e-176 620.2 326 100.0
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 2.8e-63 246.5 222 55.0
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 1.1e-62 244.6 198 58.6
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.7e-52 210.7 208 52.4
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.5e-48 197.6 196 50.0
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.5e-48 197.6 196 50.0
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 4.3e-48 196.1 193 50.3
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 9.7e-48 194.9 220 46.4
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 2.8e-47 193.4 201 47.3
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.8e-47 193.4 189 49.7
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.8e-47 193.4 189 49.7
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 4.8e-47 192.6 235 44.3
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 4.8e-47 192.6 201 47.8
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 6.3e-47 192.2 196 48.0
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 2.4e-46 190.3 192 49.0
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 2.4e-46 190.3 249 43.0
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 2.4e-46 190.3 195 48.2
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 3.1e-46 189.9 217 45.2
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 5.3e-46 189.1 193 47.7
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 9.0e-46 188.3 191 50.3
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 1.2e-45 188.0 193 48.7
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 2.0e-45 187.2 219 46.1
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 2.0e-45 187.2 193 48.2
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 2.6e-45 186.8 193 48.2
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 2.6e-45 186.8 193 48.2
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 3.4e-45 186.4 199 46.2
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 3.4e-45 186.4 207 46.4
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 3.4e-45 186.4 230 43.5
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 3.4e-45 186.4 196 46.9
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 4.5e-45 186.0 193 48.2
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 4.5e-45 186.0 193 46.6
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 4.5e-45 186.0 194 46.9
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 7.6e-45 185.3 224 43.3
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 1.0e-44 184.9 193 46.6
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 1.3e-44 184.5 193 48.2
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 1.3e-44 184.5 225 44.4
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 1.7e-44 184.1 218 45.0
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 1.7e-44 184.1 221 43.0
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 2.2e-44 183.7 193 47.7
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 2.2e-44 183.7 207 46.4
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 2.9e-44 183.3 193 48.2
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 2.9e-44 183.3 191 49.2
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 3.8e-44 183.0 246 41.5
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 3.8e-44 183.0 236 42.8
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 5.0e-44 182.6 246 41.5
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 5.0e-44 182.6 236 41.5
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 6.5e-44 182.2 236 42.8
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 6.5e-44 182.2 211 46.4
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 6.5e-44 182.2 193 46.1
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.1e-43 181.4 200 46.0
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 1.1e-43 181.4 200 46.5
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 1.1e-43 181.4 193 45.6
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 1.4e-43 181.0 203 44.8
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 1.9e-43 180.6 200 46.0
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 1.9e-43 180.6 248 43.5
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 2.5e-43 180.3 247 40.5
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 2.5e-43 180.3 202 45.0
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 2.5e-43 180.3 247 40.5
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 2.5e-43 180.3 247 40.5
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 2.5e-43 180.3 252 41.7
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 2.5e-43 180.3 190 45.8
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 4.2e-43 179.5 193 46.1
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 4.2e-43 179.5 213 43.7
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 4.2e-43 179.5 213 43.7
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 5.5e-43 179.1 221 43.0
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 5.5e-43 179.1 240 40.4
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 5.5e-43 179.1 200 45.5
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 5.5e-43 179.1 240 40.4
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 7.2e-43 178.7 180 47.2
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 9.4e-43 178.3 246 42.7
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 9.4e-43 178.3 195 44.6
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 1.6e-42 177.6 186 45.2
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 1.6e-42 177.6 192 46.4
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 2.1e-42 177.2 191 47.1
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 2.7e-42 176.8 195 44.6
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 3.6e-42 176.4 200 43.0
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.6e-42 176.4 193 47.2
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 4.6e-42 176.0 193 45.6
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 6.1e-42 175.6 193 44.6
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 7.9e-42 175.3 193 45.1
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 7.9e-42 175.3 250 40.0
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.0e-41 174.9 193 45.1
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 1.0e-41 174.9 219 42.9
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 1.4e-41 174.5 188 48.4
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.8e-41 174.1 193 44.6
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 3.0e-41 173.3 210 43.3
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 3.0e-41 173.3 239 40.6
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 3.0e-41 173.3 248 40.3
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 3.9e-41 172.9 186 45.2
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 1.5e-40 171.0 225 44.4
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 5.7e-40 169.1 193 43.0
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 5.7e-40 169.1 194 46.9
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 7.4e-40 168.7 181 45.3
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 7.4e-40 168.7 194 46.9
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 7.4e-40 168.7 183 45.9
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 9.7e-40 168.3 230 41.3
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 9.7e-40 168.3 201 43.3
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 9.7e-40 168.3 201 43.8
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 1.3e-39 167.9 190 44.7
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 3.7e-39 166.4 180 45.0
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 3.4e-37 159.8 227 38.8
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 4.5e-37 159.5 165 47.3
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 1.0e-33 148.3 158 46.8
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 1.4e-33 147.9 193 42.5
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 9.7e-32 141.7 129 51.2
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.8e-30 137.5 210 37.6
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 3.8e-28 129.8 133 48.1
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 3.0e-25 120.2 134 47.0
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.1e-22 110.2 195 34.4
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 3.5e-21 106.7 153 37.3
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.3e-20 104.8 193 34.7
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 2.1e-18 97.4 138 37.0
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 4.0e-17 93.2 181 32.0
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 5.2e-17 92.8 91 49.5
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 2.4e-14 84.0 115 38.3
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 7.0e-14 82.4 84 44.0
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 6.5e-12 75.9 104 40.4
MCO09G217 Micromonas commoda HOM05D006484 ORTHO05D008002 5.5e-11 72.8 148 31.8
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 3.6e-10 70.1 164 29.9
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 2.2e-07 60.8 80 40.0
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 4.1e-06 56.6 51 45.1


User provided reference genes

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