Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 4.6e-163 577.8 283 100.0
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.5e-78 295.8 282 51.1
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 9.8e-73 277.7 263 52.9
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.5e-52 210.7 270 39.6
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 7.3e-52 208.4 273 39.6
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 7.3e-52 208.4 269 41.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.6e-51 207.2 251 41.8
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 2.1e-51 206.8 264 39.8
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 2.8e-51 206.5 276 39.5
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 3.6e-51 206.1 270 40.0
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 8.1e-51 204.9 276 39.9
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.1e-50 204.5 250 42.0
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.4e-50 204.1 270 38.5
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.4e-50 203.4 252 41.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 4.0e-50 202.6 277 38.6
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 6.9e-50 201.8 263 39.2
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 9.0e-50 201.4 281 37.4
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 9.0e-50 201.4 270 37.8
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 9.0e-50 201.4 269 39.4
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.2e-49 201.1 256 39.8
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.2e-49 201.1 245 41.6
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.0e-49 200.3 270 37.4
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 5.8e-49 198.7 256 40.6
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 5.8e-49 198.7 269 39.4
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 9.9e-49 198.0 260 40.0
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.3e-48 197.6 269 38.3
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.3e-48 197.6 280 37.9
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.7e-48 197.2 259 39.4
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.2e-48 196.8 263 36.9
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 2.2e-48 196.8 269 39.4
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 2.9e-48 196.4 269 38.3
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 2.9e-48 196.4 254 39.8
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 3.8e-48 196.1 252 40.9
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.8e-48 196.1 248 39.9
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 4.9e-48 195.7 254 39.8
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 4.9e-48 195.7 269 37.9
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 6.4e-48 195.3 251 39.0
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 6.4e-48 195.3 266 38.3
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 6.4e-48 195.3 275 36.4
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.1e-47 194.5 252 39.7
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.9e-47 193.7 276 39.1
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.9e-47 193.7 263 39.5
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.9e-47 193.7 260 36.5
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 2.4e-47 193.4 274 38.0
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.4e-47 193.4 256 38.7
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 3.2e-47 193.0 277 37.9
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 7.1e-47 191.8 256 37.9
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 9.3e-47 191.4 266 38.7
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 9.3e-47 191.4 204 44.1
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.2e-46 191.0 273 37.7
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.7e-46 189.9 255 39.6
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 4.6e-46 189.1 251 39.8
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.0e-45 188.0 258 37.6
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.7e-45 187.2 274 38.0
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.7e-45 187.2 274 38.3
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 2.3e-45 186.8 235 40.9
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 3.0e-45 186.4 261 38.7
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 3.9e-45 186.0 235 40.0
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 3.9e-45 186.0 263 39.9
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 5.1e-45 185.7 236 41.1
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.1e-44 184.5 266 38.3
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.1e-44 184.5 253 37.9
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.9e-44 183.7 253 38.3
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 2.5e-44 183.3 275 37.8
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 5.6e-44 182.2 266 37.2
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 7.3e-44 181.8 245 38.4
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 9.6e-44 181.4 254 38.2
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 9.6e-44 181.4 237 39.2
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.3e-43 181.0 265 39.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 1.3e-43 181.0 279 37.6
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 2.1e-43 180.3 255 39.6
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.1e-43 180.3 277 36.8
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 6.2e-43 178.7 182 47.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 1.4e-42 177.6 184 45.7
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 9.0e-42 174.9 234 40.6
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 9.0e-42 174.9 296 35.5
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 1.2e-41 174.5 292 34.6
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.0e-41 173.7 254 38.6
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 4.5e-41 172.6 239 37.2
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 6.4e-40 168.7 276 36.6
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 6.4e-40 168.7 198 40.9
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 8.4e-40 168.3 198 40.4
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 1.4e-39 167.5 206 40.3
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 3.2e-39 166.4 301 33.9
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.2e-39 166.4 248 37.1
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 7.1e-39 165.2 316 32.3
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 7.1e-39 165.2 295 33.2
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.2e-38 164.5 211 40.3
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 2.7e-38 163.3 190 40.5
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.5e-38 162.9 177 42.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 6.0e-38 162.2 234 38.0
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 6.0e-38 162.2 189 41.8
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 3.0e-37 159.8 255 36.5
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.9e-37 159.5 177 42.9
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 5.1e-37 159.1 287 32.8
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.5e-36 157.5 212 38.7
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.5e-36 157.5 326 31.0
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 1.9e-36 157.1 198 41.4
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.9e-36 157.1 202 40.6
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 3.3e-36 156.4 179 40.2
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.6e-35 154.1 240 35.4
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 3.7e-35 152.9 203 37.4
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.1e-34 151.4 283 32.5
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 1.2e-33 147.9 189 40.2
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 3.8e-32 142.9 174 40.8
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 1.5e-28 131.0 248 33.5
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 3.3e-28 129.8 184 37.5
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 4.8e-27 125.9 207 35.3
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 5.3e-26 122.5 362 27.3
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 2.6e-25 120.2 162 35.8
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 8.2e-19 98.6 186 35.5
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 3.1e-18 96.7 132 37.1
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 6.7e-13 79.0 115 37.4
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 9.1e-10 68.6 133 36.1
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 2.5e-07 60.5 100 36.0
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 2.7e-06 57.0 130 26.9


User provided reference genes

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