Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0094s0016 Marchantia polymorpha HOM05D003192 ORTHO05D003596 0.0e+00 3561.5 2277 100.0
Pp3c14_17140 Physcomitrium patens HOM05D003192 ORTHO05D003596 1.9e-73 283.1 1862 26.0
SEGI_05807 Sequoiadendron giganteum HOM05D003192 ORTHO05D003596 2.6e-62 246.1 2011 21.1
AagrBONN_evm.TU.Sc2ySwM_117.2221 Anthoceros agrestis HOM05D003192 ORTHO05D003596 3.1e-44 186.0 1002 23.8
Duzib187G1957 Durio zibethinus HOM05D003192 ORTHO05D003596 4.7e-32 145.6 823 25.2
Gohir.A11G050500 Gossypium hirsutum HOM05D003192 ORTHO05D003596 5.2e-31 142.1 844 23.8
Peaxi162Scf00191g00034 Petunia axillaris HOM05D003192 ORTHO05D003596 3.4e-30 139.4 655 24.9
Aqoxy5G01385 Aquilegia oxysepala HOM05D003192 ORTHO05D003596 8.3e-29 134.8 1168 22.4
Sed0023170 Sechium edule HOM05D003192 ORTHO05D003596 4.5e-27 129.0 891 22.3
Duzib147G1583 Durio zibethinus HOM05D003192 ORTHO05D003596 7.8e-27 128.3 1232 22.2
Gorai.007G232500 Gossypium raimondii HOM05D003192 ORTHO05D003596 1.0e-26 127.9 891 24.0
PSO210G4022 Papaver somniferum HOM05D003192 ORTHO05D003596 1.7e-26 127.1 679 23.6
Os03g0691500 Oryza sativa ssp. japonica HOM05D003192 ORTHO05D003596 3.8e-26 125.9 814 23.3
MBI16_g12462_MAGBIO Magnolia biondii HOM05D003192 ORTHO05D003596 5.0e-26 125.6 857 23.7
Nitab4.5_0004153g0070 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.9e-25 123.6 649 27.1
Gohir.D11G216300 Gossypium hirsutum HOM05D003192 ORTHO05D003596 7.3e-25 121.7 1279 21.5
CAN.G1344.16 Capsicum annuum HOM05D003192 ORTHO05D003596 9.5e-25 121.3 914 24.5
Gorai.007G058900 Gossypium raimondii HOM05D003192 ORTHO05D003596 9.5e-25 121.3 1017 23.7
MD05G1047500 Malus domestica HOM05D003192 ORTHO05D003596 9.5e-25 121.3 864 24.0
CSS0015283 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 6.1e-24 118.6 379 28.2
Gohir.D11G053800 Gossypium hirsutum HOM05D003192 ORTHO05D003596 6.1e-24 118.6 1010 22.6
Potri.001G415800 Populus trichocarpa HOM05D003192 ORTHO05D003596 6.1e-24 118.6 1214 22.8
SGA_v2.0_scaffold115G32126 Striga asiatica HOM05D003192 ORTHO05D003596 8.0e-24 118.2 782 22.1
DCAR_014184 Daucus carota HOM05D003192 ORTHO05D003596 1.0e-23 117.9 692 22.5
Hma1.2p1_1093F.1_g256220 Hydrangea macrophylla HOM05D003192 ORTHO05D003596 1.0e-23 117.9 564 25.2
Nn5g29883 Nelumbo nucifera HOM05D003192 ORTHO05D003596 1.4e-23 117.5 699 25.2
ATR0767G239 Amborella trichopoda HOM05D003192 ORTHO05D003596 2.3e-23 116.7 824 24.6
Gohir.A11G207000 Gossypium hirsutum HOM05D003192 ORTHO05D003596 2.3e-23 116.7 1198 21.9
Manes.13G100000 Manihot esculenta HOM05D003192 ORTHO05D003596 4.0e-23 115.9 893 23.5
Rhsim10G0172900 Rhododendron simsii HOM05D003192 ORTHO05D003596 8.9e-23 114.8 1000 22.6
ClCG01G018360 Citrullus lanatus HOM05D003192 ORTHO05D003596 1.5e-22 114.0 946 21.4
Nitab4.5_0002017g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.5e-22 114.0 875 22.2
Nitab4.5_0007624g0010 Nicotiana tabacum HOM05D003192 ORTHO05D003596 1.5e-22 114.0 494 26.3
PGSC0003DMG400016132 Solanum tuberosum HOM05D003192 ORTHO05D003596 1.5e-22 114.0 836 24.0
Dinv16002 Davidia involucrata HOM05D003192 ORTHO05D003596 5.7e-22 112.1 682 23.2
Sp7g35710 Schrenkiella parvula HOM05D003192 ORTHO05D003596 9.8e-22 111.3 1064 22.3
Eucgr.I00559 Eucalyptus grandis HOM05D003192 ORTHO05D003596 2.9e-21 109.8 907 20.6
Nitab4.5_0008998g0020 Nicotiana tabacum HOM05D003192 ORTHO05D003596 2.9e-21 109.8 850 22.5
PGSC0003DMG400037454 Solanum tuberosum HOM05D003192 ORTHO05D003596 2.9e-21 109.8 765 22.0
CARHR246480 Cardamine hirsuta HOM05D003192 ORTHO05D003596 4.9e-21 109.0 1041 21.8
CANSAT01G3047 Cannabis sativa HOM05D003192 ORTHO05D003596 8.3e-21 108.2 442 24.9
Zm00001eb053540 Zea mays HOM05D003192 ORTHO05D003596 8.3e-21 108.2 825 22.9
Actinidia25308 Actinidia chinensis HOM05D003192 ORTHO05D003596 1.1e-20 107.8 644 25.0
Lalb_Chr20g0122921 Lupinus albus HOM05D003192 ORTHO05D003596 1.4e-20 107.5 485 27.4
THA.LOC104807671 Tarenaya hassleriana HOM05D003192 ORTHO05D003596 1.8e-20 107.1 865 24.6
MELO3C007714.2 Cucumis melo HOM05D003192 ORTHO05D003596 3.2e-20 106.3 902 21.2
PSO170G5608 Papaver somniferum HOM05D003192 ORTHO05D003596 3.5e-19 102.8 700 21.3
Thecc.01G090500 Theobroma cacao HOM05D003192 ORTHO05D003596 4.6e-19 102.4 978 21.9
Lsat_1_v5_gn_5_109820 Lactuca sativa HOM05D003192 ORTHO05D003596 5.9e-19 102.1 422 25.8
AUR62017973 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.0e-18 101.3 258 31.8
ECA234G2607 Erigeron canadensis HOM05D003192 ORTHO05D003596 1.0e-18 101.3 532 25.0
AUR62012886 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.3e-18 100.9 802 24.1
Aa31LG6G15020 Aethionema arabicum HOM05D003192 ORTHO05D003596 2.3e-18 100.1 916 21.8
Potri.011G131500 Populus trichocarpa HOM05D003192 ORTHO05D003596 2.3e-18 100.1 1168 20.9
vmacro13008 Vaccinium macrocarpon HOM05D003192 ORTHO05D003596 2.3e-18 100.1 1051 21.6
CsaV3_6G044990 Cucumis sativus L. HOM05D003192 ORTHO05D003596 3.0e-18 99.8 1027 21.6
Sopen11g005420 Solanum pennellii HOM05D003192 ORTHO05D003596 3.0e-18 99.8 863 22.8
Sc08g0003910 Simmondsia chinensis HOM05D003192 ORTHO05D003596 3.9e-18 99.4 661 24.5
AT4G38062 Arabidopsis thaliana HOM05D003192 ORTHO05D003596 6.6e-18 98.6 850 23.1
Thhalv10027141m.g Eutrema salsugineum HOM05D003192 ORTHO05D003596 6.6e-18 98.6 869 22.2
PSO063G1758 Papaver somniferum HOM05D003192 ORTHO05D003596 6.6e-18 98.6 850 25.5
BcaC01g00350 Brassica carinata HOM05D003192 ORTHO05D003596 8.6e-18 98.2 952 23.5
Lj5C230T2 Lonicera japonica HOM05D003192 ORTHO05D003596 1.1e-17 97.8 835 22.8
Prupe.6G201700 Prunus persica HOM05D003192 ORTHO05D003596 1.9e-17 97.1 427 25.1
HPP92_014211 Vanilla planifolia HOM05D003192 ORTHO05D003596 2.5e-17 96.7 352 27.0
MSTRG.20280 Avicennia marina HOM05D003192 ORTHO05D003596 3.3e-17 96.3 870 21.4
EL10Ac9g22072 Beta vulgaris HOM05D003192 ORTHO05D003596 4.3e-17 95.9 722 22.6
Sc03g0000330 Simmondsia chinensis HOM05D003192 ORTHO05D003596 4.3e-17 95.9 496 24.4
VMungo0299G0001 Vigna mungo HOM05D003192 ORTHO05D003596 4.3e-17 95.9 871 22.5
Migut.B00551 Erythranthe guttata HOM05D003192 ORTHO05D003596 7.3e-17 95.1 354 25.7
Cc07_g14090 Coffea canephora HOM05D003192 ORTHO05D003596 9.5e-17 94.7 869 23.2
Glyma.15G058300 Glycine max HOM05D003192 ORTHO05D003596 1.2e-16 94.4 886 21.9
QL06p035789 Quercus lobata HOM05D003192 ORTHO05D003596 1.2e-16 94.4 183 34.4
TAR381G0021 Trochodendron aralioides HOM05D003192 ORTHO05D003596 1.2e-16 94.4 882 25.4
BcaB03g12309 Brassica carinata HOM05D003192 ORTHO05D003596 1.6e-16 94.0 1070 21.4
arahy.Tifrunner.gnm1.ann1.T6BZ3D Arachis hypogaea HOM05D003192 ORTHO05D003596 2.1e-16 93.6 610 23.4
BraA08t34266Z Brassica rapa HOM05D003192 ORTHO05D003596 2.8e-16 93.2 1003 22.4
HanXRQChr10g0289971 Helianthus annuus HOM05D003192 ORTHO05D003596 2.8e-16 93.2 916 22.6
Cfa006881 Carpinus fangiana HOM05D003192 ORTHO05D003596 3.6e-16 92.8 840 23.6
C03p78760 Brassica napus HOM05D003192 ORTHO05D003596 4.7e-16 92.4 952 22.9
Glyma.13G256600 Glycine max HOM05D003192 ORTHO05D003596 4.7e-16 92.4 833 22.1
Lj4g0006883 Lotus japonicus HOM05D003192 ORTHO05D003596 6.2e-16 92.0 600 22.7
Sed0023722 Sechium edule HOM05D003192 ORTHO05D003596 6.2e-16 92.0 1040 20.4
Atru.chr6.1263 Acer truncatum HOM05D003192 ORTHO05D003596 8.0e-16 91.7 426 26.3
Phvul.006G201900 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 8.0e-16 91.7 839 23.0
AUR62027110 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.4e-15 90.9 748 21.5
EL10Ac6g15204 Beta vulgaris HOM05D003192 ORTHO05D003596 1.8e-15 90.5 281 29.2
BolC3t20120H Brassica oleracea HOM05D003192 ORTHO05D003596 1.8e-15 90.5 952 23.7
Ca_22609_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 1.8e-15 90.5 513 22.4
Ah.03g139960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 2.3e-15 90.1 273 29.3
Solyc11g010620.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 2.3e-15 90.1 778 24.3
Actinidia02392 Actinidia chinensis HOM05D003192 ORTHO05D003596 3.1e-15 89.7 857 20.3
Ah.01g007410 Amaranthus hybridus HOM05D003192 ORTHO05D003596 3.1e-15 89.7 704 21.6
arahy.Tifrunner.gnm1.ann1.CWW4UK Arachis hypogaea HOM05D003192 ORTHO05D003596 3.1e-15 89.7 586 23.5
TAR625G0274 Trochodendron aralioides HOM05D003192 ORTHO05D003596 3.1e-15 89.7 1223 23.1
unitig_32.g10709 Utricularia gibba HOM05D003192 ORTHO05D003596 3.1e-15 89.7 656 22.6
PGR031G3296 Punica granatum HOM05D003192 ORTHO05D003596 5.2e-15 89.0 865 22.3
CSS0047518 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 6.8e-15 88.6 829 21.6
PSO782G1877 Papaver somniferum HOM05D003192 ORTHO05D003596 6.8e-15 88.6 782 24.9
QL11p025213 Quercus lobata HOM05D003192 ORTHO05D003596 1.2e-14 87.8 421 26.8
TPR.G14606 Trifolium pratense HOM05D003192 ORTHO05D003596 2.0e-14 87.0 505 23.4
A08p23070 Brassica napus HOM05D003192 ORTHO05D003596 3.4e-14 86.3 1002 22.4
CSS0015843 Camellia sinensis var. sinensis HOM05D003192 ORTHO05D003596 4.4e-14 85.9 836 20.3
FAN19G3065 Fragaria x ananassa HOM05D003192 ORTHO05D003596 4.4e-14 85.9 431 26.0
SGA_v2.0_scaffold83G26376 Striga asiatica HOM05D003192 ORTHO05D003596 4.4e-14 85.9 548 20.8
Dinv24148 Davidia involucrata HOM05D003192 ORTHO05D003596 5.8e-14 85.5 828 21.9
FAN23G2850 Fragaria x ananassa HOM05D003192 ORTHO05D003596 5.8e-14 85.5 212 30.7
Zm00001eb217110 Zea mays HOM05D003192 ORTHO05D003596 5.8e-14 85.5 999 21.6
MSTRG.15688 Avicennia marina HOM05D003192 ORTHO05D003596 7.5e-14 85.1 907 20.6
Psat1g214080 Pisum sativum HOM05D003192 ORTHO05D003596 7.5e-14 85.1 599 25.0
FvH4_1g19631 Fragaria vesca HOM05D003192 ORTHO05D003596 1.3e-13 84.3 431 26.0
MD10G1054400 Malus domestica HOM05D003192 ORTHO05D003596 3.7e-13 82.8 870 23.1
RcHm_v2.0_Chr2g0111201 Rosa chinensis HOM05D003192 ORTHO05D003596 4.9e-13 82.4 428 26.2
Glyma.08G279600 Glycine max HOM05D003192 ORTHO05D003596 6.4e-13 82.0 813 22.8
Sabra11G0118600 Salix brachista HOM05D003192 ORTHO05D003596 6.4e-13 82.0 778 20.7
TWI53G1641 Tripterygium wilfordii HOM05D003192 ORTHO05D003596 8.3e-13 81.6 225 28.9
AUR62003664 Chenopodium quinoa HOM05D003192 ORTHO05D003596 1.1e-12 81.3 145 37.9
FAN28G2653 Fragaria x ananassa HOM05D003192 ORTHO05D003596 1.4e-12 80.9 424 28.8
Actinidia06514 Actinidia chinensis HOM05D003192 ORTHO05D003596 2.4e-12 80.1 196 32.7
Ca_00164_v3 Cicer arietinum L. HOM05D003192 ORTHO05D003596 2.4e-12 80.1 638 23.2
Dinv29065 Davidia involucrata HOM05D003192 ORTHO05D003596 4.1e-12 79.3 124 37.9
FAN26G1555 Fragaria x ananassa HOM05D003192 ORTHO05D003596 4.1e-12 79.3 428 25.5
Phvul.003G289000 Phaseolus vulgaris HOM05D003192 ORTHO05D003596 5.4e-12 79.0 430 22.6
arahy.Tifrunner.gnm1.ann1.Y4FDPH Arachis hypogaea HOM05D003192 ORTHO05D003596 7.0e-12 78.6 534 20.6
AL7G12570 Arabidopsis lyrata HOM05D003192 ORTHO05D003596 2.7e-11 76.6 798 20.3
Ah.01g023960 Amaranthus hybridus HOM05D003192 ORTHO05D003596 3.5e-11 76.3 642 22.0
Carub.0007s0215 Capsella rubella HOM05D003192 ORTHO05D003596 3.5e-11 76.3 868 20.5
arahy.Tifrunner.gnm1.ann1.88QBIW Arachis hypogaea HOM05D003192 ORTHO05D003596 4.6e-11 75.9 525 20.8
Haze_03871 Corylus avellana HOM05D003192 ORTHO05D003596 4.6e-11 75.9 835 24.8
HPP92_026470 Vanilla planifolia HOM05D003192 ORTHO05D003596 4.6e-11 75.9 419 25.8
CiPaw.05G029500 Carya illinoinensis HOM05D003192 ORTHO05D003596 6.0e-11 75.5 645 22.6
FAN24G0742 Fragaria x ananassa HOM05D003192 ORTHO05D003596 2.3e-10 73.6 626 24.1
CiPaw.08G140100 Carya illinoinensis HOM05D003192 ORTHO05D003596 3.0e-10 73.2 964 20.7
Ah.02g123570 Amaranthus hybridus HOM05D003192 ORTHO05D003596 5.0e-10 72.4 244 28.3
Gorai.003G037800 Gossypium raimondii HOM05D003192 ORTHO05D003596 6.6e-10 72.0 325 25.2
Gohir.A02G144501 Gossypium hirsutum HOM05D003192 ORTHO05D003596 1.1e-09 71.2 448 23.0
Solyc10g047540.3 Solanum lycopersicum HOM05D003192 ORTHO05D003596 1.1e-09 71.2 506 20.9
VMungo0251G1378 Vigna mungo HOM05D003192 ORTHO05D003596 1.1e-09 71.2 512 23.0
CANSAT54G2948 Cannabis sativa HOM05D003192 ORTHO05D003596 1.5e-09 70.9 632 23.3
Atru.chr3.1246 Acer truncatum HOM05D003192 ORTHO05D003596 5.6e-09 68.9 1244 22.4
GSVIVG01005928001 Vitis vinifera HOM05D003192 ORTHO05D003596 1.2e-08 67.8 757 23.4
MD01G1039400 Malus domestica HOM05D003192 ORTHO05D003596 1.6e-08 67.4 865 21.5
Sopen10g017840 Solanum pennellii HOM05D003192 ORTHO05D003596 2.1e-08 67.0 795 20.5
Dinv13601 Davidia involucrata HOM05D003192 ORTHO05D003596 1.1e-07 64.7 1035 20.4
Haze_10522 Corylus avellana HOM05D003192 ORTHO05D003596 1.8e-07 63.9 418 22.2
Medtr2g009620 Medicago truncatula HOM05D003192 ORTHO05D003596 2.3e-07 63.5 623 21.8
TPR.G9507 Trifolium pratense HOM05D003192 ORTHO05D003596 6.8e-07 62.0 610 23.3
RcHm_v2.0_Chr6g0271001 Rosa chinensis HOM05D003192 ORTHO05D003596 1.5e-06 60.8 878 21.0
Gohir.D03G036033 Gossypium hirsutum HOM05D003192 ORTHO05D003596 2.0e-06 60.5 322 24.2
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 4.4e-06 59.3 861 19.9
Glyma.18G147000 Glycine max HOM05D003192 ORTHO05D003596 7.5e-06 58.5 983 22.3


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