Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 3.2e-170 601.7 305 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 4.3e-98 362.1 304 63.5
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.6e-87 326.2 311 57.6
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 3.1e-80 302.8 316 55.4
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.1e-76 290.0 274 56.9
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 6.6e-75 285.0 295 53.6
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 7.3e-74 281.6 274 56.2
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 9.0e-72 274.6 306 51.3
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 6.4e-70 268.5 273 52.4
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.9e-69 266.9 269 53.5
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-68 264.2 272 52.9
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.2e-68 264.2 272 52.6
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.6e-68 263.8 270 52.2
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.1e-68 263.5 278 51.1
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.1e-68 263.5 278 51.1
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 3.5e-68 262.7 271 52.0
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.5e-68 262.7 272 51.8
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 7.9e-68 261.5 304 49.0
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 7.9e-68 261.5 304 49.0
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 1.0e-67 261.2 287 49.8
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 1.0e-67 261.2 269 52.8
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.0e-67 261.2 271 52.8
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.3e-67 260.8 278 50.7
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.3e-67 260.8 273 51.6
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 1.8e-67 260.4 271 52.4
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.8e-67 260.4 271 52.4
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 3.0e-67 259.6 279 50.9
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.0e-67 259.6 274 51.8
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 3.9e-67 259.2 276 52.9
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 3.9e-67 259.2 275 51.3
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 5.1e-67 258.8 275 51.6
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 1.1e-66 257.7 289 50.5
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 1.1e-66 257.7 283 49.8
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.5e-66 257.3 273 52.7
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 1.9e-66 256.9 275 50.2
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 4.3e-66 255.8 272 51.1
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 4.3e-66 255.8 273 51.3
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 4.3e-66 255.8 269 50.2
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 5.6e-66 255.4 273 52.7
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 5.6e-66 255.4 270 51.5
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 7.4e-66 255.0 271 51.7
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 9.6e-66 254.6 275 51.3
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 9.6e-66 254.6 280 51.8
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.3e-65 254.2 273 50.9
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 2.1e-65 253.4 280 48.9
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 2.1e-65 253.4 273 50.5
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.8e-65 253.1 273 51.3
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 2.8e-65 253.1 272 50.7
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 3.7e-65 252.7 272 51.1
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 3.7e-65 252.7 272 51.1
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.7e-65 252.7 283 49.8
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.7e-65 252.7 275 50.2
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 6.2e-65 251.9 286 50.3
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 6.2e-65 251.9 278 49.3
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 6.2e-65 251.9 284 49.3
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 8.1e-65 251.5 278 48.9
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 8.1e-65 251.5 287 48.4
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.1e-64 251.1 278 48.9
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.8e-64 250.4 275 50.5
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.8e-64 250.4 273 49.5
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.4e-64 250.0 304 48.0
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 2.4e-64 250.0 273 50.2
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 2.4e-64 250.0 270 53.0
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 3.1e-64 249.6 287 48.8
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.1e-64 249.6 278 48.2
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 3.1e-64 249.6 278 46.8
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 4.0e-64 249.2 287 48.4
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 6.9e-64 248.4 275 49.8
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 6.9e-64 248.4 287 48.1
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 9.0e-64 248.1 269 49.8
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.2e-63 247.7 269 49.4
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.2e-63 247.7 278 49.6
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.5e-63 247.3 272 50.0
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 3.4e-63 246.1 272 51.1
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 4.5e-63 245.7 269 49.8
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 5.8e-63 245.4 275 49.5
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 7.6e-63 245.0 272 50.4
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 7.6e-63 245.0 269 49.8
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 7.6e-63 245.0 276 47.8
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 7.6e-63 245.0 274 49.6
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 9.9e-63 244.6 269 49.1
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 1.7e-62 243.8 275 50.2
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 1.7e-62 243.8 269 48.3
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.2e-62 243.4 254 53.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 6.4e-62 241.9 276 47.1
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.1e-61 241.1 279 47.7
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 1.4e-61 240.7 269 48.0
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.9e-61 240.4 274 48.9
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 2.4e-61 240.0 269 48.0
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 7.1e-61 238.4 274 49.6
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 3.5e-60 236.1 281 47.0
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 6.0e-60 235.3 269 48.0
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 6.0e-60 235.3 269 48.0
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 6.0e-60 235.3 258 47.7
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 1.0e-59 234.6 269 46.8
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.3e-59 233.4 272 48.2
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 3.9e-59 232.6 272 47.8
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 4.3e-58 229.2 304 44.4
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 2.1e-57 226.9 269 47.6
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.4e-56 224.2 227 53.7
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 3.1e-56 223.0 295 46.8
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.0e-55 220.3 351 39.3
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 7.6e-55 218.4 274 46.0
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.3e-54 217.6 272 45.2
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.9e-54 216.5 259 47.9
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 3.8e-54 216.1 264 47.7
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.4e-53 214.2 266 45.9
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 3.2e-53 213.0 272 44.9
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 7.1e-53 211.8 271 43.9
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.2e-52 211.1 274 45.6
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.3e-51 207.6 200 53.0
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 3.0e-51 206.5 276 43.1
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 3.9e-51 206.1 234 48.7
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 3.1e-48 196.4 210 51.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 5.3e-48 195.7 426 32.4
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.4e-45 187.6 182 53.8
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 4.1e-40 169.5 270 38.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 5.9e-39 165.6 267 37.5
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 1.3e-38 164.5 213 44.6
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.2e-37 159.8 279 39.1
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 7.2e-37 158.7 277 38.3
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 3.6e-36 156.4 146 56.2
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 5.1e-35 152.5 149 54.4
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 8.8e-35 151.8 272 37.5
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 1.1e-34 151.4 147 54.4
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 1.7e-33 147.5 148 54.1
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 3.4e-31 139.8 183 43.7
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 4.7e-28 129.4 218 39.4
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 6.3e-25 119.0 147 45.6
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.2e-22 110.5 113 56.6
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 3.1e-16 90.1 129 35.7
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.5e-13 80.5 77 51.9
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 2.2e-09 67.4 121 30.6


User provided reference genes

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