Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0091s0070 Marchantia polymorpha HOM05D006417 ORTHO05D008113 2.6e-27 124.8 68 100.0
Pp3c24_10010 Physcomitrium patens HOM05D006417 ORTHO05D008113 2.0e-19 98.6 68 82.4
AagrBONN_evm.TU.Sc2ySwM_117.2290 Anthoceros agrestis HOM05D006417 ORTHO05D008113 2.6e-19 98.2 62 83.9
Pp3c23_11500 Physcomitrium patens HOM05D006417 ORTHO05D008113 4.4e-19 97.4 68 82.4
Sc12g0009320 Simmondsia chinensis HOM05D006417 ORTHO05D008113 1.1e-17 92.8 62 79.0
Aqoxy7G03790 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 3.1e-17 91.3 62 79.0
CANSAT56G0242 Cannabis sativa HOM05D006417 ORTHO05D008113 9.1e-17 89.7 62 77.4
Lj3g0004039 Lotus japonicus HOM05D006417 ORTHO05D008113 9.1e-17 89.7 62 77.4
Lalb_Chr01g0012721 Lupinus albus HOM05D006417 ORTHO05D008113 9.1e-17 89.7 62 77.4
CsaV3_3G010850 Cucumis sativus L. HOM05D006417 ORTHO05D008113 1.2e-16 89.4 62 77.4
HPP92_003724 Vanilla planifolia HOM05D002497 ORTHO05D002697 1.2e-16 89.4 68 75.0
ATR0724G030 Amborella trichopoda HOM05D006417 ORTHO05D008113 2.0e-16 88.6 62 79.0
MD17G1194100 Malus domestica HOM05D006417 ORTHO05D008113 2.0e-16 88.6 62 75.8
Aa31LG8G3190 Aethionema arabicum HOM05D006417 ORTHO05D008113 2.7e-16 88.2 62 77.4
MBI06_g06678_MAGBIO Magnolia biondii HOM05D006417 ORTHO05D008113 2.7e-16 88.2 62 75.8
RcHm_v2.0_Chr2g0106421 Rosa chinensis HOM05D006417 ORTHO05D008113 2.7e-16 88.2 62 77.4
TAR626G0232 Trochodendron aralioides HOM05D006417 ORTHO05D008113 2.7e-16 88.2 62 77.4
AT3G16040 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 3.5e-16 87.8 62 75.8
ClCG05G003220 Citrullus lanatus HOM05D006417 ORTHO05D008113 3.5e-16 87.8 62 75.8
Medtr4g012800 Medicago truncatula HOM05D006417 ORTHO05D008113 3.5e-16 87.8 62 75.8
Psat7g250440 Pisum sativum HOM05D006417 ORTHO05D008113 3.5e-16 87.8 62 75.8
AL3G28690 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 4.5e-16 87.4 62 75.8
AL810U10020 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 4.5e-16 87.4 62 75.8
ClCG02G009660 Citrullus lanatus HOM05D006417 ORTHO05D008113 4.5e-16 87.4 62 75.8
Thhalv10022282m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 4.5e-16 87.4 62 75.8
Glyma.08G206000 Glycine max HOM05D006417 ORTHO05D008113 4.5e-16 87.4 62 75.8
Migut.D01026 Erythranthe guttata HOM05D006417 ORTHO05D008113 5.9e-16 87.0 62 74.2
Glyma.07G005600 Glycine max HOM05D006417 ORTHO05D008113 7.7e-16 86.7 62 75.8
Phvul.010G150000 Phaseolus vulgaris HOM05D006417 ORTHO05D008113 7.7e-16 86.7 62 74.2
Hund06616 Selenicereus undatus HOM05D006417 ORTHO05D008113 7.7e-16 86.7 62 75.8
Thecc.06G089800 Theobroma cacao HOM05D006417 ORTHO05D008113 7.7e-16 86.7 62 74.2
Aqoxy7G01686 Aquilegia oxysepala HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 75.8
AL1G27360 Arabidopsis lyrata HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 74.2
AT1G15270 Arabidopsis thaliana HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 74.2
Carub.0001s1503 Capsella rubella HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 74.2
FAN05G1876 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 75.8
FAN14G4157 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 75.8
Prupe.3G069900 Prunus persica HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 74.2
Sed0026778 Sechium edule HOM05D006417 ORTHO05D008113 1.0e-15 86.3 62 74.2
Aa31LG4G200 Aethionema arabicum HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 74.2
BcaC05g25455 Brassica carinata HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 74.2
BcaC05g25459 Brassica carinata HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 74.2
Carub.0003s1577 Capsella rubella HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 74.2
FAN02G0035 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 75.8
Lj5A59T64 Lonicera japonica HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 75.8
RcHm_v2.0_Chr2g0138111 Rosa chinensis HOM05D006417 ORTHO05D008113 1.3e-15 85.9 62 75.8
EL10Ac9g22008 Beta vulgaris HOM05D006417 ORTHO05D008113 1.7e-15 85.5 62 75.8
Ciclev10026914m.g Citrus clementina HOM05D006417 ORTHO05D008113 1.7e-15 85.5 62 74.2
Gohir.D09G082500 Gossypium hirsutum HOM05D006417 ORTHO05D008113 1.7e-15 85.5 62 74.2
Potri.001G181800 Populus trichocarpa HOM05D006417 ORTHO05D008113 1.7e-15 85.5 62 74.2
BcaC07g38776 Brassica carinata HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
BcaC07g41515 Brassica carinata HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
A08p31670 Brassica napus HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
A09p61510 Brassica napus HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
CARHR015790 Cardamine hirsuta HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
DCAR_023056 Daucus carota HOM05D006417 ORTHO05D008113 2.2e-15 85.1 60 78.3
Gohir.A09G082600 Gossypium hirsutum HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 74.2
Hma1.2p1_2039F.1_g312170 Hydrangea macrophylla HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
Sp1g13580 Schrenkiella parvula HOM05D006417 ORTHO05D008113 2.2e-15 85.1 62 72.6
BcaB03g13069 Brassica carinata HOM05D006417 ORTHO05D008113 2.9e-15 84.7 62 72.6
C05p50430 Brassica napus HOM05D006417 ORTHO05D008113 2.9e-15 84.7 62 74.2
CARHR091200 Cardamine hirsuta HOM05D006417 ORTHO05D008113 3.8e-15 84.3 62 74.2
Glyma.20G047300 Glycine max HOM05D006417 ORTHO05D008113 3.8e-15 84.3 62 74.2
SalBow2G2995 Salvia bowleyana HOM05D006417 ORTHO05D008113 3.8e-15 84.3 62 72.6
Sed0004760 Sechium edule HOM05D006417 ORTHO05D008113 3.8e-15 84.3 62 72.6
FAN09G4522 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.5e-14 82.4 62 72.6
Cpa.g.sc41.8 Carica papaya HOM05D006417 ORTHO05D008113 1.9e-14 82.0 68 69.1
FAN26G3442 Fragaria x ananassa HOM05D006417 ORTHO05D008113 1.9e-14 82.0 62 75.8
Atru.chr1.3302 Acer truncatum HOM05D006417 ORTHO05D008113 2.5e-14 81.6 62 71.0
Cc04_g03270 Coffea canephora HOM05D006417 ORTHO05D008113 2.5e-14 81.6 68 73.5
COL.COLO4_30395 Corchorus olitorius HOM05D006417 ORTHO05D008113 3.2e-14 81.3 62 74.2
Nn2g11755 Nelumbo nucifera HOM05D006417 ORTHO05D008113 3.2e-14 81.3 63 74.6
CiPaw.01G238100 Carya illinoinensis HOM05D006417 ORTHO05D008113 4.2e-14 80.9 62 74.2
unitig_27.g25076 Utricularia gibba HOM05D006417 ORTHO05D008113 4.2e-14 80.9 62 71.0
C08p17070 Brassica napus HOM05D006417 ORTHO05D008113 5.5e-14 80.5 60 70.0
BolC8t49333H Brassica oleracea HOM05D006417 ORTHO05D008113 5.5e-14 80.5 60 70.0
Sp3g14390 Schrenkiella parvula HOM05D006417 ORTHO05D008113 5.5e-14 80.5 62 71.0
A05p33430 Brassica napus HOM05D006417 ORTHO05D008113 7.2e-14 80.1 57 77.2
Dinv38039 Davidia involucrata HOM05D006417 ORTHO05D008113 7.2e-14 80.1 62 72.6
BolC5t30076H Brassica oleracea HOM05D006417 ORTHO05D008113 9.4e-14 79.7 59 72.9
Haze_16401 Corylus avellana HOM05D006417 ORTHO05D008113 9.4e-14 79.7 62 72.6
Lj3g0012949 Lotus japonicus HOM05D006417 ORTHO05D008113 1.2e-13 79.3 63 71.4
Manes.04G124600 Manihot esculenta HOM05D006417 ORTHO05D008113 1.2e-13 79.3 71 64.8
Peaxi162Scf00034g00611 Petunia axillaris HOM05D006417 ORTHO05D008113 1.2e-13 79.3 62 74.2
A06p11260 Brassica napus HOM05D006417 ORTHO05D008113 1.6e-13 79.0 59 71.2
C08p45090 Brassica napus HOM05D006417 ORTHO05D008113 1.6e-13 79.0 59 71.2
BolC8t52055H Brassica oleracea HOM05D006417 ORTHO05D008113 1.6e-13 79.0 59 71.2
BraA06t24306Z Brassica rapa HOM05D006417 ORTHO05D008113 1.6e-13 79.0 59 71.2
BraA09t41524Z Brassica rapa HOM05D006417 ORTHO05D008113 1.6e-13 79.0 59 71.2
Eucgr.J02983 Eucalyptus grandis HOM05D006417 ORTHO05D008113 1.6e-13 79.0 57 75.4
CiPaw.02G150500 Carya illinoinensis HOM05D006417 ORTHO05D008113 2.1e-13 78.6 62 72.6
PGSC0003DMG400007579 Solanum tuberosum HOM05D006417 ORTHO05D008113 2.1e-13 78.6 62 74.2
Zm00001eb225700 Zea mays HOM05D006417 ORTHO05D008113 2.1e-13 78.6 59 74.6
Oeu063955.1 Olea europaea HOM05D006417 ORTHO05D008113 2.7e-13 78.2 62 74.2
Gorai.006G098200 Gossypium raimondii HOM05D006417 ORTHO05D008113 4.7e-13 77.4 72 63.9
Migut.I00879 Erythranthe guttata HOM05D006417 ORTHO05D008113 6.1e-13 77.0 58 72.4
Solyc12g043160.3 Solanum lycopersicum HOM05D006417 ORTHO05D008113 8.0e-13 76.6 62 72.6
HanXRQChr12g0376701 Helianthus annuus HOM05D006417 ORTHO05D008113 1.0e-12 76.3 62 71.0
Cre10.g438600 Chlamydomonas reinhardtii HOM05D006417 ORTHO05D008113 1.4e-12 75.9 62 69.4
Lsat_1_v5_gn_5_130340 Lactuca sativa HOM05D006417 ORTHO05D008113 1.4e-12 75.9 62 69.4
CSS0028003 Camellia sinensis var. sinensis HOM05D006417 ORTHO05D008113 1.8e-12 75.5 56 71.4
HanXRQChr04g0096081 Helianthus annuus HOM05D006417 ORTHO05D008113 1.8e-12 75.5 62 69.4
BcaC05g28917 Brassica carinata HOM05D006417 ORTHO05D008113 3.0e-12 74.7 71 63.4
FAN19G1924 Fragaria x ananassa HOM05D006417 ORTHO05D008113 4.0e-12 74.3 54 74.1
SalBow2G0478 Salvia bowleyana HOM05D008308 ORTHO05D008113 4.0e-12 74.3 58 70.7
GSVIVG01017091001 Vitis vinifera HOM05D006417 ORTHO05D008113 5.2e-12 73.9 62 67.7
arahy.Tifrunner.gnm1.ann1.6441EL Arachis hypogaea HOM05D006417 ORTHO05D008113 6.8e-12 73.6 87 54.0
FvH4_1g16510 Fragaria vesca HOM05D006417 ORTHO05D008113 8.8e-12 73.2 54 74.1
Glyma.14G136351 Glycine max HOM05D006417 ORTHO05D008113 3.4e-11 71.2 60 66.7
Thhalv10009202m.g Eutrema salsugineum HOM05D006417 ORTHO05D008113 4.4e-11 70.9 90 51.1
BcaNung06587 Brassica carinata HOM05D006417 ORTHO05D008113 7.5e-11 70.1 60 63.3
CAN.G144.3 Capsicum annuum HOM05D006417 ORTHO05D008113 9.8e-11 69.7 57 73.7
SGA_v2.0_scaffold37G14829 Striga asiatica HOM05D006417 ORTHO05D008113 1.3e-10 69.3 57 66.7
DCAR_007563 Daucus carota HOM05D006417 ORTHO05D008113 2.2e-10 68.6 62 64.5
DCAR_026325 Daucus carota HOM05D006417 ORTHO05D008113 2.2e-10 68.6 62 64.5
ECA247G1523 Erigeron canadensis HOM05D001142 ORTHO05D004628 4.8e-10 67.4 55 69.1
DCAR_002649 Daucus carota HOM05D006417 ORTHO05D008113 3.1e-09 64.7 57 66.7
Lsat_1_v5_gn_1_35180 Lactuca sativa HOM05D006417 ORTHO05D008113 2.3e-07 58.5 54 63.0
Lalb_Chr04g0262751 Lupinus albus HOM05D006417 ORTHO05D008113 3.8e-07 57.8 37 83.8
ClCG11G012700 Citrullus lanatus HOM05D006417 ORTHO05D008113 5.0e-07 57.4 62 58.1
ClCG09G002080 Citrullus lanatus HOM05D000001 ORTHO05D000003 8.6e-07 56.6 40 75.0
BraA08t35089Z Brassica rapa HOM05D006417 ORTHO05D008113 1.5e-06 55.8 37 78.4
Nitab4.5_0004241g0020 Nicotiana tabacum HOM05D006417 ORTHO05D008113 3.3e-06 54.7 57 61.4


User provided reference genes

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