Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 3.8e-59 231.1 101 100.0
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 8.7e-40 166.8 102 70.6
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 2.5e-39 165.2 101 71.3
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 1.4e-26 122.9 101 57.4
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 1.9e-26 122.5 101 56.4
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 56.4
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 4.2e-26 121.3 101 56.4
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 2.1e-25 119.0 101 51.5
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.1e-25 119.0 101 55.4
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 2.7e-25 118.6 101 55.4
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.7e-25 118.6 101 53.5
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 3.6e-25 118.2 101 53.5
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 3.6e-25 118.2 101 53.5
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 55.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 54.5
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 4.6e-25 117.9 101 54.5
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 6.1e-25 117.5 101 54.5
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 7.9e-25 117.1 101 56.4
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.4e-24 116.3 101 53.5
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.8e-24 115.9 99 54.5
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 3.0e-24 115.2 99 54.5
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 3.0e-24 115.2 101 55.4
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 3.0e-24 115.2 101 53.5
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 3.0e-24 115.2 101 51.5
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 3.0e-24 115.2 101 51.5
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 3.9e-24 114.8 101 56.4
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 3.9e-24 114.8 101 52.5
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 3.9e-24 114.8 101 54.5
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 5.1e-24 114.4 101 52.5
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 5.1e-24 114.4 101 53.5
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 5.1e-24 114.4 101 53.5
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 5.1e-24 114.4 101 55.4
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 5.1e-24 114.4 101 55.4
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 5.1e-24 114.4 101 51.5
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 6.7e-24 114.0 101 54.5
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 6.7e-24 114.0 101 53.5
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.1e-23 113.2 99 50.5
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 1.5e-23 112.8 101 51.5
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 2.0e-23 112.5 99 53.5
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 2.0e-23 112.5 101 52.5
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 2.0e-23 112.5 101 52.5
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 2.0e-23 112.5 101 52.5
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 2.5e-23 112.1 101 50.5
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 2.5e-23 112.1 101 54.5
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 2.5e-23 112.1 101 49.5
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 4.3e-23 111.3 99 50.5
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 5.7e-23 110.9 101 53.5
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 9.7e-23 110.2 101 53.5
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 1.3e-22 109.8 101 52.5
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 1.7e-22 109.4 95 50.5
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 2.2e-22 109.0 101 53.5
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 3.7e-22 108.2 99 48.5
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 3.7e-22 108.2 100 50.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 4.8e-22 107.8 101 52.5
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 8.2e-22 107.1 101 53.5
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 1.4e-21 106.3 101 51.5
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 1.8e-21 105.9 101 51.5
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 2.4e-21 105.5 101 51.5
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 2.4e-21 105.5 101 49.5
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 2.4e-21 105.5 99 52.5
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 3.1e-21 105.1 99 44.4
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 4.1e-21 104.8 101 50.5
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 4.1e-21 104.8 101 50.5
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 4.1e-21 104.8 101 48.5
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 4.1e-21 104.8 101 51.5
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 5.3e-21 104.4 101 50.5
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 5.3e-21 104.4 101 50.5
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 5.3e-21 104.4 101 51.5
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 6.9e-21 104.0 101 53.5
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 6.9e-21 104.0 101 52.5
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 6.9e-21 104.0 101 52.5
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 6.9e-21 104.0 101 52.5
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 6.9e-21 104.0 101 52.5
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 6.9e-21 104.0 101 52.5
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 9.1e-21 103.6 101 52.5
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 2.0e-20 102.4 99 49.5
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 2.0e-20 102.4 86 55.8
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.0e-20 102.4 101 50.5
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 2.6e-20 102.1 101 51.5
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 2.6e-20 102.1 101 51.5
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 3.4e-20 101.7 101 51.5
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 3.4e-20 101.7 101 51.5
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 1.0e-19 100.1 99 45.5
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 1.3e-19 99.8 101 50.5
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 1.3e-19 99.8 89 51.7
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 1.3e-19 99.8 101 49.5
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.9e-19 98.6 101 49.5
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 3.8e-19 98.2 95 48.4
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 1.1e-18 96.7 101 50.5
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 7.2e-18 94.0 134 38.1
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.6e-17 92.8 101 44.6
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 1.6e-17 92.8 99 38.4
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 2.7e-17 92.0 101 43.6
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 6.1e-17 90.9 111 43.2
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 1.4e-13 79.7 89 47.2
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 9.1e-13 77.0 72 48.6
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 2.7e-09 65.5 170 28.2
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 1.0e-08 63.5 98 37.8
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 4.8e-06 54.7 39 56.4


User provided reference genes

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