Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0090s0083 Marchantia polymorpha HOM05D005438 ORTHO05D006744 1.4e-239 832.8 490 100.0
SEGI_20773 Sequoiadendron giganteum HOM05D005438 ORTHO05D006744 4.8e-67 259.6 485 38.4
Pp3c2_28530 Physcomitrium patens HOM05D005438 ORTHO05D006744 1.0e-61 241.9 485 39.4
AagrBONN_evm.TU.Sc2ySwM_344.4712 Anthoceros agrestis HOM05D005438 ORTHO05D006744 2.2e-59 234.2 597 33.0
Aqoxy7G00195 Aquilegia oxysepala HOM05D005438 ORTHO05D006744 4.2e-55 219.9 484 35.1
PSO017G3503 Papaver somniferum HOM05D005438 ORTHO05D006744 9.4e-55 218.8 486 36.2
MELO3C005715.2 Cucumis melo HOM05D005438 ORTHO05D006744 2.1e-54 217.6 479 36.1
Gohir.D03G078500 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.1e-54 217.6 481 34.7
MD14G1111900 Malus domestica HOM05D005438 ORTHO05D006744 2.7e-54 217.2 481 36.2
CsaV3_5G002390 Cucumis sativus L. HOM05D005438 ORTHO05D006744 6.1e-54 216.1 479 35.1
Sed0027839 Sechium edule HOM05D005438 ORTHO05D006744 7.9e-54 215.7 482 34.9
Ca_10950_v3 Cicer arietinum L. HOM05D005438 ORTHO05D006744 1.8e-53 214.5 483 34.0
Gorai.003G085600 Gossypium raimondii HOM05D005438 ORTHO05D006744 3.0e-53 213.8 482 35.3
Phvul.002G293100 Phaseolus vulgaris HOM05D005438 ORTHO05D006744 3.0e-53 213.8 486 34.2
Nn1g01673 Nelumbo nucifera HOM05D005438 ORTHO05D006744 3.9e-53 213.4 509 34.2
Gohir.A02G105300 Gossypium hirsutum HOM05D005438 ORTHO05D006744 6.7e-53 212.6 481 34.3
PSO478G3903 Papaver somniferum HOM05D005438 ORTHO05D006744 2.6e-52 210.7 482 34.6
Rhsim02G0235700 Rhododendron simsii HOM05D005438 ORTHO05D006744 3.3e-52 210.3 483 34.4
Thecc.03G286500 Theobroma cacao HOM05D005438 ORTHO05D006744 3.3e-52 210.3 482 35.5
DCAR_004611 Daucus carota HOM05D005438 ORTHO05D006744 4.4e-52 209.9 480 34.6
ECA233G5263 Erigeron canadensis HOM05D005438 ORTHO05D006744 4.4e-52 209.9 486 35.8
FAN18G2027 Fragaria x ananassa HOM05D005438 ORTHO05D006744 4.4e-52 209.9 487 35.1
Nitab4.5_0007906g0070 Nicotiana tabacum HOM05D005438 ORTHO05D006744 4.4e-52 209.9 480 33.8
VMungo0251G0328 Vigna mungo HOM05D005438 ORTHO05D006744 4.4e-52 209.9 485 33.2
CiPaw.11G129800 Carya illinoinensis HOM05D005438 ORTHO05D006744 5.7e-52 209.5 487 35.7
FvH4_5g03190 Fragaria vesca HOM05D005438 ORTHO05D006744 5.7e-52 209.5 487 35.1
AUR62019752 Chenopodium quinoa HOM05D005438 ORTHO05D006744 7.4e-52 209.1 483 34.2
FAN13G0364 Fragaria x ananassa HOM05D005438 ORTHO05D006744 7.4e-52 209.1 487 34.9
TWI60G1446 Tripterygium wilfordii HOM05D005438 ORTHO05D006744 7.4e-52 209.1 487 34.7
RcHm_v2.0_Chr7g0196591 Rosa chinensis HOM05D005438 ORTHO05D006744 9.7e-52 208.8 485 35.3
arahy.Tifrunner.gnm1.ann1.Y7QUAU Arachis hypogaea HOM05D005438 ORTHO05D006744 1.7e-51 208.0 484 34.5
THA.LOC104817794 Tarenaya hassleriana HOM05D005438 ORTHO05D006744 1.7e-51 208.0 485 37.9
GSVIVG01019417001 Vitis vinifera HOM05D005438 ORTHO05D006744 1.7e-51 208.0 483 34.4
CSS0046697 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 2.2e-51 207.6 491 34.4
Duzib084G0802 Durio zibethinus HOM05D005438 ORTHO05D006744 2.2e-51 207.6 483 34.8
MBI11_g09068_MAGBIO Magnolia biondii HOM05D005438 ORTHO05D006744 2.2e-51 207.6 318 41.2
QL12p031793 Quercus lobata HOM05D005438 ORTHO05D006744 2.2e-51 207.6 496 35.9
Glyma.08G018100 Glycine max HOM05D005438 ORTHO05D006744 2.8e-51 207.2 486 34.6
Atru.chr9.2115 Acer truncatum HOM05D005438 ORTHO05D006744 3.7e-51 206.8 486 36.4
arahy.Tifrunner.gnm1.ann1.I29YTG Arachis hypogaea HOM05D005438 ORTHO05D006744 3.7e-51 206.8 481 34.3
PSO266G0069 Papaver somniferum HOM05D005438 ORTHO05D006744 3.7e-51 206.8 482 34.2
Prupe.5G106500 Prunus persica HOM05D005438 ORTHO05D006744 8.2e-51 205.7 483 34.4
Eucgr.L02379 Eucalyptus grandis HOM05D005438 ORTHO05D006744 1.4e-50 204.9 483 35.2
Lj4g0011941 Lotus japonicus HOM05D005438 ORTHO05D006744 1.4e-50 204.9 492 35.0
Potri.003G132600 Populus trichocarpa HOM05D005438 ORTHO05D006744 1.4e-50 204.9 498 32.5
Ciclev10020644m.g Citrus clementina HOM05D005438 ORTHO05D006744 1.8e-50 204.5 484 33.9
Lsat_1_v5_gn_3_8761 Lactuca sativa HOM05D005438 ORTHO05D006744 1.8e-50 204.5 476 33.4
FAN08G1515 Fragaria x ananassa HOM05D005438 ORTHO05D006744 2.4e-50 204.1 483 34.0
CAN.G532.38 Capsicum annuum HOM05D005438 ORTHO05D006744 3.1e-50 203.8 482 34.0
Solyc08g081580.4 Solanum lycopersicum HOM05D005438 ORTHO05D006744 3.1e-50 203.8 480 34.2
AUR62010754 Chenopodium quinoa HOM05D005438 ORTHO05D006744 4.1e-50 203.4 483 34.2
Nitab4.5_0003015g0090 Nicotiana tabacum HOM05D005438 ORTHO05D006744 5.3e-50 203.0 488 33.4
Peaxi162Scf00074g01737 Petunia axillaris HOM05D005438 ORTHO05D006744 5.3e-50 203.0 482 33.6
Sabra03G0095000 Salix brachista HOM05D005438 ORTHO05D006744 5.3e-50 203.0 484 34.9
Aa31LG2G1070 Aethionema arabicum HOM05D005438 ORTHO05D006744 9.1e-50 202.2 485 33.4
Eucgr.D01812 Eucalyptus grandis HOM05D005438 ORTHO05D006744 9.1e-50 202.2 483 35.0
Medtr8g098940 Medicago truncatula HOM05D005438 ORTHO05D006744 9.1e-50 202.2 483 32.9
AL2G11130 Arabidopsis lyrata HOM05D005438 ORTHO05D006744 1.6e-49 201.4 492 38.4
COL.COLO4_08362 Corchorus olitorius HOM05D005438 ORTHO05D006744 1.6e-49 201.4 483 33.3
Manes.01G057900 Manihot esculenta HOM05D005438 ORTHO05D006744 1.6e-49 201.4 481 33.5
Psat7g029680 Pisum sativum HOM05D005438 ORTHO05D006744 2.0e-49 201.1 483 33.7
CANSAT21G0041 Cannabis sativa HOM05D005438 ORTHO05D006744 2.6e-49 200.7 485 36.1
FAN04G0810 Fragaria x ananassa HOM05D005438 ORTHO05D006744 3.5e-49 200.3 484 34.3
PGSC0003DMG400012320 Solanum tuberosum HOM05D005438 ORTHO05D006744 3.5e-49 200.3 480 34.2
TPR.G12953 Trifolium pratense HOM05D005438 ORTHO05D006744 3.5e-49 200.3 483 32.1
HanXRQChr02g0049721 Helianthus annuus HOM05D005438 ORTHO05D006744 4.5e-49 199.9 482 34.9
Dinv37597 Davidia involucrata HOM05D005438 ORTHO05D006744 5.9e-49 199.5 487 33.7
Glyma.05G211800 Glycine max HOM05D005438 ORTHO05D006744 7.7e-49 199.1 483 33.7
Actinidia10609 Actinidia chinensis HOM05D005438 ORTHO05D006744 1.3e-48 198.4 485 33.0
TAR374G1319 Trochodendron aralioides HOM05D005438 ORTHO05D006744 1.3e-48 198.4 497 33.2
Zm00001eb001860 Zea mays HOM05D005438 ORTHO05D006744 1.7e-48 198.0 482 31.5
Sopen08g029890 Solanum pennellii HOM05D005438 ORTHO05D006744 2.9e-48 197.2 480 33.8
Lalb_Chr05g0224491 Lupinus albus HOM05D005438 ORTHO05D006744 3.8e-48 196.8 481 33.3
Duzib205G0010 Durio zibethinus HOM05D005438 ORTHO05D006744 5.0e-48 196.4 481 34.1
BcaB07g31422 Brassica carinata HOM05D005438 ORTHO05D006744 1.9e-47 194.5 488 33.6
Carub.0002s0086 Capsella rubella HOM05D005438 ORTHO05D006744 2.5e-47 194.1 491 33.8
ClCG01G002320 Citrullus lanatus HOM05D005438 ORTHO05D006744 2.5e-47 194.1 479 31.9
Cc08_g15250 Coffea canephora HOM05D005438 ORTHO05D006744 3.2e-47 193.7 485 36.3
Gohir.D12G233900 Gossypium hirsutum HOM05D005438 ORTHO05D006744 3.2e-47 193.7 489 33.3
SMO134G0098 Selaginella moellendorffii HOM05D005438 ORTHO05D006744 3.2e-47 193.7 474 34.4
Sc01g0009850 Simmondsia chinensis HOM05D005438 ORTHO05D006744 3.2e-47 193.7 319 40.1
Atru.BG.199.p Acer truncatum HOM05D005438 ORTHO05D006744 4.2e-47 193.4 480 35.2
Thhalv10023525m.g Eutrema salsugineum HOM05D005438 ORTHO05D006744 5.5e-47 193.0 490 35.5
Hund11433 Selenicereus undatus HOM05D005438 ORTHO05D006744 5.5e-47 193.0 483 32.5
CARHR047000 Cardamine hirsuta HOM05D005438 ORTHO05D006744 7.2e-47 192.6 489 33.3
AT1G63980 Arabidopsis thaliana HOM05D005438 ORTHO05D006744 9.4e-47 192.2 488 33.8
Gorai.008G250200 Gossypium raimondii HOM05D005438 ORTHO05D006744 1.6e-46 191.4 482 33.0
PGR031G2565 Punica granatum HOM05D005438 ORTHO05D006744 2.7e-46 190.7 483 32.1
Sp2g00710 Schrenkiella parvula HOM05D005438 ORTHO05D006744 8.0e-46 189.1 491 34.2
ATR0661G541 Amborella trichopoda HOM05D005438 ORTHO05D006744 1.8e-45 188.0 484 31.6
HPP92_021018 Vanilla planifolia HOM05D005438 ORTHO05D006744 1.8e-45 188.0 482 32.2
Os03g0125300 Oryza sativa ssp. japonica HOM05D005438 ORTHO05D006744 2.3e-45 187.6 486 30.9
vmacro11410 Vaccinium macrocarpon HOM05D005438 ORTHO05D006744 2.3e-45 187.6 479 32.2
HanXRQChr17g0533211 Helianthus annuus HOM05D005438 ORTHO05D006744 4.0e-45 186.8 313 40.6
BcaC04g22661 Brassica carinata HOM05D005438 ORTHO05D006744 5.2e-45 186.4 487 33.3
Migut.J01399 Erythranthe guttata HOM05D005438 ORTHO05D006744 1.1e-44 185.3 479 33.4
Ah.12g051920 Amaranthus hybridus HOM05D005438 ORTHO05D006744 4.4e-44 183.3 490 31.8
C09p16950 Brassica napus HOM05D005438 ORTHO05D006744 4.4e-44 183.3 489 35.8
BcaB07g31532 Brassica carinata HOM05D005438 ORTHO05D006744 2.2e-43 181.0 487 32.2
C09p18360 Brassica napus HOM05D005438 ORTHO05D006744 3.7e-43 180.3 493 36.7
CDE04G0809 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 8.2e-43 179.1 487 31.6
A09p14060 Brassica napus HOM05D005438 ORTHO05D006744 2.4e-42 177.6 490 33.7
Migut.A00720 Erythranthe guttata HOM05D005438 ORTHO05D006744 5.3e-42 176.4 489 32.5
BolC9t54592H Brassica oleracea HOM05D005438 ORTHO05D006744 2.0e-41 174.5 489 36.0
EL10Ac5g12834 Beta vulgaris HOM05D005438 ORTHO05D006744 4.5e-41 173.3 318 39.3
Lj2C178T12 Lonicera japonica HOM05D005438 ORTHO05D006744 2.9e-40 170.6 484 34.1
BolC9t54729H Brassica oleracea HOM05D005438 ORTHO05D006744 5.0e-40 169.9 493 36.3
A09p15160 Brassica napus HOM05D005438 ORTHO05D006744 1.1e-39 168.7 489 34.4
BraA09t37158Z Brassica rapa HOM05D005438 ORTHO05D006744 1.5e-39 168.3 495 35.6
BraA09t37053Z Brassica rapa HOM05D005438 ORTHO05D006744 1.9e-39 167.9 496 33.5
unitig_32.g10979 Utricularia gibba HOM05D005438 ORTHO05D006744 3.2e-39 167.2 328 37.5
SGA_v2.0_scaffold173G39139 Striga asiatica HOM05D005438 ORTHO05D006744 1.2e-38 165.2 514 33.9
MD06G1091000 Malus domestica HOM05D005438 ORTHO05D006744 1.0e-37 162.2 485 30.7
Pp3c7_27020 Physcomitrium patens HOM05D005438 ORTHO05D006744 8.8e-37 159.1 488 30.9
Gohir.A12G233400 Gossypium hirsutum HOM05D005438 ORTHO05D006744 2.0e-36 157.9 489 30.5
CBR_g35011 Chara braunii HOM05D005438 ORTHO05D006744 4.5e-33 146.7 322 36.3
CSS0015982 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 6.5e-32 142.9 286 36.7
Haze_08758 Corylus avellana HOM05D005438 ORTHO05D006744 6.1e-30 136.3 318 34.9
Cre07.g347300 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D021338 8.6e-24 115.9 369 32.2
Cre07.g347400 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 8.6e-24 115.9 369 32.2
CSS0040427 Camellia sinensis var. sinensis HOM05D005438 ORTHO05D006744 1.5e-23 115.2 145 46.2
Lsat_1_v5_gn_1_49360 Lactuca sativa HOM05D005438 ORTHO05D006744 4.0e-21 107.1 272 31.6
Lsat_1_v5_gn_5_103140 Lactuca sativa HOM05D005438 ORTHO05D006744 4.0e-21 107.1 272 31.6
Lsat_1_v5_gn_9_38321 Lactuca sativa HOM05D005438 ORTHO05D006744 4.0e-21 107.1 272 31.6
CDE12G0222 Ceratophyllum demersum HOM05D005438 ORTHO05D006744 1.5e-20 105.1 152 42.1
SHI31900 Sapria himalayana HOM05D005438 ORTHO05D006744 8.3e-19 99.4 342 28.1
Cpa.g.sc631.4 Carica papaya HOM05D005438 ORTHO05D006744 7.0e-18 96.3 83 60.2
BcaC04g22519 Brassica carinata HOM05D005438 ORTHO05D006744 4.3e-15 87.0 357 33.3
Cpa.g.c39085 Carica papaya HOM05D005438 ORTHO05D006744 8.0e-14 82.8 117 40.2
Actinidia28345 Actinidia chinensis HOM05D005438 ORTHO05D006744 9.8e-12 75.9 83 49.4
ATR0661G444 Amborella trichopoda HOM05D005438 ORTHO05D006744 4.9e-11 73.6 96 41.7
BcaNung05361 Brassica carinata HOM05D005438 ORTHO05D006744 2.3e-08 64.7 220 34.5
ECA246G3112 Erigeron canadensis HOM05D005438 ORTHO05D006744 5.0e-08 63.5 112 42.0
HanXRQChr16g0521071 Helianthus annuus HOM05D005438 ORTHO05D006744 1.9e-07 61.6 39 69.2
Cre01.g054000 Chlamydomonas reinhardtii HOM05D005438 ORTHO05D006744 4.7e-06 57.0 64 46.9


User provided reference genes

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