Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 0.0e+00 2580.8 1310 100.0
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 3.8e-252 875.9 1225 40.7
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 2.7e-250 869.8 1221 41.0
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 5.6e-248 862.1 1248 39.3
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 1.4e-246 857.4 1200 40.8
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 3.1e-246 856.3 1263 39.6
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 5.3e-246 855.5 1224 40.4
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 6.9e-246 855.1 1265 39.8
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.2e-245 854.4 1265 39.3
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 7.6e-245 851.7 1265 39.6
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 2.2e-244 850.1 1234 39.5
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 3.8e-244 849.4 1269 39.0
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 3.8e-244 849.4 1237 40.1
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 1.9e-243 847.0 1270 39.1
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 7.1e-243 845.1 1263 39.0
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 7.1e-243 845.1 1229 40.0
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 1.8e-241 840.5 1212 40.3
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 1.1e-240 837.8 1217 42.5
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 1.5e-240 837.4 1265 39.7
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 4.8e-239 832.4 1240 39.4
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 3.1e-238 829.7 1273 38.5
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 4.1e-238 829.3 1261 39.3
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 5.3e-238 828.9 1267 38.4
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.2e-237 827.8 1213 39.7
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 3.4e-237 826.2 1210 40.2
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.7e-236 823.9 1213 39.7
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 2.2e-236 823.5 1265 38.2
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 6.7e-233 812.0 1265 37.9
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 1.1e-232 811.2 1286 38.0
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 2.5e-232 810.1 1263 38.1
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 4.3e-232 809.3 1209 38.4
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 2.2e-228 797.0 1214 38.6
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 7.2e-227 792.0 1265 37.9
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 7.4e-224 781.9 1213 37.8
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 9.7e-224 781.6 1274 38.0
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 2.2e-223 780.4 1030 42.5
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 2.8e-223 780.0 1210 38.8
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 1.1e-222 778.1 1219 38.1
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 2.0e-221 773.9 1212 38.3
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 5.9e-221 772.3 1253 37.3
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 1.2e-218 764.6 1305 35.7
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 1.8e-217 760.8 1194 38.1
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 3.9e-217 759.6 1091 40.1
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 7.2e-211 738.8 1106 39.2
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 2.7e-210 736.9 1268 36.4
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 1.5e-208 731.1 1203 37.3
SEGI_15434 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 2.2e-207 727.2 1100 40.8
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 3.7e-207 726.5 1261 35.8
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 5.9e-205 719.2 1218 36.3
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 7.2e-203 712.2 1292 35.5
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 3.5e-197 693.3 1148 38.0
ATR0820G239 Amborella trichopoda HOM05D007235 ORTHO05D008985 3.8e-196 689.9 957 40.9
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.4e-193 681.4 1212 35.6
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 2.2e-191 674.1 1280 34.4
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 3.7e-191 673.3 1108 36.4
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 4.9e-191 672.9 1012 40.0
Gorai.002G238500 Gossypium raimondii HOM05D007235 ORTHO05D008985 2.9e-183 647.1 897 41.2
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 1.6e-181 641.3 1209 34.4
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 1.3e-180 638.3 966 40.6
Sed0026179 Sechium edule HOM05D007235 ORTHO05D008985 1.3e-175 621.7 894 39.0
Gohir.A01G204950 Gossypium hirsutum HOM05D007235 ORTHO05D008985 4.9e-175 619.8 896 40.3
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 2.4e-174 617.5 975 37.2
Ciclev10011029m.g Citrus clementina HOM05D007235 ORTHO05D008985 4.6e-173 613.2 923 39.3
GSVIVG01033880001 Vitis vinifera HOM05D007235 ORTHO05D008985 1.7e-172 611.3 892 39.6
RcHm_v2.0_Chr3g0474611 Rosa chinensis HOM05D007235 ORTHO05D008985 5.8e-160 569.7 787 40.4
RcHm_v2.0_Chr3g0474651 Rosa chinensis HOM05D007235 ORTHO05D008985 2.4e-153 547.7 788 39.7
Migut.J01008 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.6e-149 535.0 835 37.6
Cc06_g21890 Coffea canephora HOM05D007235 ORTHO05D008985 2.7e-149 534.3 787 39.6
MBI17_g41037_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 3.3e-147 527.3 719 41.6
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 1.9e-118 431.8 722 37.3
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 2.1e-117 428.3 742 35.8
TAR623G0688 Trochodendron aralioides HOM05D007235 ORTHO05D008985 4.0e-100 370.9 421 44.4
Aqoxy2G01077 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 5.7e-99 367.1 477 42.1
Aqoxy2G01078 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 7.0e-97 360.1 416 44.7
Haze_19643 Corylus avellana HOM05D007235 ORTHO05D008985 3.7e-82 311.2 504 37.1
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 2.7e-80 305.1 676 33.0
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 6.6e-79 300.4 437 38.2
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 4.0e-76 291.2 516 38.6
QL07p038322 Quercus lobata HOM05D007235 ORTHO05D008985 4.6e-72 277.7 386 39.6
MBI17_g48244_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 5.9e-72 277.3 383 41.0
Lj7A625G73 Lonicera japonica HOM05D007235 ORTHO05D008985 7.5e-59 233.8 244 47.1
Atru.chr8.1457 Acer truncatum HOM05D007235 ORTHO05D008985 1.4e-49 203.0 226 44.7
SEGI_13044 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 3.1e-44 185.3 209 48.3
COL.COLO4_29681 Corchorus olitorius HOM05D007235 ORTHO05D008985 5.2e-44 184.5 345 35.4
RcHm_v2.0_Chr3g0474591 Rosa chinensis HOM05D007235 ORTHO05D008985 9.3e-41 173.7 232 41.4
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.7e-39 169.5 367 31.6
COL.COLO4_29682 Corchorus olitorius HOM05D007235 ORTHO05D008985 6.6e-39 167.5 183 42.6
Migut.J01007 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.6e-37 162.9 215 42.3
QL07p038324 Quercus lobata HOM05D007235 ORTHO05D008985 1.1e-36 160.2 200 41.5
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 4.0e-36 158.3 1149 22.4
Cfa016638 Carpinus fangiana HOM05D007235 ORTHO05D008985 3.4e-35 155.2 341 33.4
RcHm_v2.0_Chr3g0474671 Rosa chinensis HOM05D007235 ORTHO05D008985 7.6e-35 154.1 236 39.0
Gorai.002G238400 Gossypium raimondii HOM05D007235 ORTHO05D008985 1.3e-34 153.3 219 42.5
Ciclev10013621m.g Citrus clementina HOM05D007235 ORTHO05D008985 2.2e-34 152.5 215 40.9
GSVIVG01033881001 Vitis vinifera HOM05D007235 ORTHO05D008985 2.2e-34 152.5 214 41.1
Gohir.A01G204900 Gossypium hirsutum HOM05D007235 ORTHO05D008985 1.0e-31 143.7 221 40.7
Cfa021070 Carpinus fangiana HOM05D007235 ORTHO05D008985 8.1e-29 134.0 151 41.7
AagrBONN_evm.TU.Sc2ySwM_228.1996 Anthoceros agrestis HOM05D007235 ORTHO05D008985 4.0e-20 105.1 130 45.4
COL.COLO4_29684 Corchorus olitorius HOM05D002712 ORTHO05D007713 4.0e-20 105.1 107 44.9
RcHm_v2.0_Chr3g0474631 Rosa chinensis HOM05D007235 ORTHO05D008985 5.3e-20 104.8 95 48.4
DCAR_007761 Daucus carota HOM05D007235 ORTHO05D008985 7.1e-17 94.4 108 47.2
ATR0820G010 Amborella trichopoda HOM05D007235 ORTHO05D008985 2.7e-16 92.4 126 39.7
Thecc.05G094000 Theobroma cacao HOM05D007235 ORTHO05D008985 6.7e-15 87.8 217 35.9
arahy.Tifrunner.gnm1.ann1.YJKT09 Arachis hypogaea HOM05D001324 ORTHO05D001220 1.7e-10 73.2 246 30.1
QL07p038319 Quercus lobata HOM05D007235 ORTHO05D008985 2.2e-10 72.8 70 55.7
QL07p038331 Quercus lobata HOM05D007235 ORTHO05D008985 2.9e-10 72.4 50 58.0
Nitab4.5_0000236g0010 Nicotiana tabacum HOM05D001324 ORTHO05D001220 1.2e-08 67.0 587 23.0
Medtr7g097210 Medicago truncatula HOM05D001324 ORTHO05D001220 2.7e-08 65.9 255 26.3
Solyc09g072610.3 Solanum lycopersicum HOM05D001324 ORTHO05D001220 6.1e-08 64.7 595 22.2
Psat3g057160 Pisum sativum HOM05D001324 ORTHO05D001220 1.0e-07 63.9 587 22.5
Sopen09g028420 Solanum pennellii HOM05D001324 ORTHO05D001220 1.0e-07 63.9 593 22.1
CAN.G1251.9 Capsicum annuum HOM05D001324 ORTHO05D001220 2.3e-07 62.8 591 22.0
Glyma.19G166500 Glycine max HOM05D001324 ORTHO05D001220 2.3e-07 62.8 256 27.0
Aa31LG8G9910 Aethionema arabicum HOM05D001324 ORTHO05D001220 3.0e-07 62.4 629 21.1
QL09p040231 Quercus lobata HOM05D001324 ORTHO05D001220 3.9e-07 62.0 239 27.6
Eucgr.H00753 Eucalyptus grandis HOM05D001324 ORTHO05D001220 5.1e-07 61.6 573 23.2
Lj1g0008553 Lotus japonicus HOM05D001324 ORTHO05D001220 5.1e-07 61.6 251 26.3
PGSC0003DMG400024294 Solanum tuberosum HOM05D001324 ORTHO05D001220 5.1e-07 61.6 594 21.9
arahy.Tifrunner.gnm1.ann1.HX0053 Arachis hypogaea HOM05D001324 ORTHO05D001220 6.7e-07 61.2 246 27.6
AUR62015543 Chenopodium quinoa HOM05D001324 ORTHO05D001220 6.7e-07 61.2 236 26.3
Lalb_Chr01g0019591 Lupinus albus HOM05D001324 ORTHO05D001220 8.7e-07 60.8 308 26.0
TPR.G9201 Trifolium pratense HOM05D001324 ORTHO05D001220 8.7e-07 60.8 250 26.0
Aqoxy2G03704 Aquilegia oxysepala HOM05D001324 ORTHO05D001220 1.1e-06 60.5 228 25.4
arahy.Tifrunner.gnm1.ann1.C4X96D Arachis hypogaea HOM05D001324 ORTHO05D001220 1.1e-06 60.5 246 27.2
Oeu024802.1 Olea europaea HOM05D001324 ORTHO05D001220 1.1e-06 60.5 230 27.4
Sp3g21080 Schrenkiella parvula HOM05D001324 ORTHO05D001220 1.1e-06 60.5 234 27.8
BcaB03g14624 Brassica carinata HOM05D001324 ORTHO05D001220 1.5e-06 60.1 214 26.6
BraA03t13466Z Brassica rapa HOM05D001324 ORTHO05D001220 1.5e-06 60.1 97 41.2
Nitab4.5_0006244g0010 Nicotiana tabacum HOM05D001324 ORTHO05D001220 1.5e-06 60.1 590 22.9
Actinidia37302 Actinidia chinensis HOM05D007235 ORTHO05D008985 1.9e-06 59.7 40 65.0
AL3G38070 Arabidopsis lyrata HOM05D001324 ORTHO05D001220 1.9e-06 59.7 272 26.8
BcaC01g03373 Brassica carinata HOM05D001324 ORTHO05D001220 1.9e-06 59.7 214 25.7
A03p43260 Brassica napus HOM05D001324 ORTHO05D001220 1.9e-06 59.7 214 26.2
BolC3t17581H Brassica oleracea HOM05D001324 ORTHO05D001220 1.9e-06 59.7 214 25.7
HPP92_005128 Vanilla planifolia HOM05D001324 ORTHO05D001220 1.9e-06 59.7 591 22.8
Aa31LG2G21800 Aethionema arabicum HOM05D001324 ORTHO05D001220 2.5e-06 59.3 215 26.5
Aqoxy2G03705 Aquilegia oxysepala HOM05D001324 ORTHO05D001220 2.5e-06 59.3 228 25.9
C03p53160 Brassica napus HOM05D001324 ORTHO05D001220 2.5e-06 59.3 214 26.2
Peaxi162Scf00045g00821 Petunia axillaris HOM05D001324 ORTHO05D001220 2.5e-06 59.3 584 22.6
Solyc08g075240.3 Solanum lycopersicum HOM05D001324 ORTHO05D001220 2.5e-06 59.3 601 21.6
Sopen08g023840 Solanum pennellii HOM05D001324 ORTHO05D001220 2.5e-06 59.3 601 21.6
Aqoxy2G03701 Aquilegia oxysepala HOM05D001324 ORTHO05D001220 3.3e-06 58.9 228 25.0
Lj1C71G11 Lonicera japonica HOM05D001324 ORTHO05D001220 3.3e-06 58.9 603 21.2
PSO832G1769 Papaver somniferum HOM05D001324 ORTHO05D001220 3.3e-06 58.9 226 25.2
Hund03056 Selenicereus undatus HOM05D001324 ORTHO05D001220 3.3e-06 58.9 600 21.8
QL09p040216 Quercus lobata HOM05D001324 ORTHO05D001220 4.3e-06 58.5 239 26.4
RcHm_v2.0_Chr2g0157861 Rosa chinensis HOM05D000172 ORTHO05D000781 4.3e-06 58.5 141 30.5
Actinidia23596 Actinidia chinensis HOM05D000172 ORTHO05D000781 5.7e-06 58.2 128 32.8
Thhalv10020141m.g Eutrema salsugineum HOM05D001324 ORTHO05D001220 5.7e-06 58.2 214 26.6
THA.LOC104808645 Tarenaya hassleriana HOM05D001324 ORTHO05D001220 5.7e-06 58.2 108 37.0
VMungo1127G0502 Vigna mungo HOM05D001324 ORTHO05D001220 5.7e-06 58.2 103 38.8
A07p09030 Brassica napus HOM05D001324 ORTHO05D001220 7.4e-06 57.8 218 26.6
BolC7t41895H Brassica oleracea HOM05D001324 ORTHO05D001220 7.4e-06 57.8 223 27.4
BraA07t28697Z Brassica rapa HOM05D001324 ORTHO05D001220 7.4e-06 57.8 218 26.6
CANSAT78G1809 Cannabis sativa HOM05D001324 ORTHO05D001220 7.4e-06 57.8 219 27.4
Carub.0003s2367 Capsella rubella HOM05D001324 ORTHO05D001220 7.4e-06 57.8 214 27.1
Gohir.A09G228700 Gossypium hirsutum HOM05D001324 ORTHO05D001220 7.4e-06 57.8 236 25.4
Nn3g19722 Nelumbo nucifera HOM05D001324 ORTHO05D001220 7.4e-06 57.8 218 27.1
Phvul.011G136600 Phaseolus vulgaris HOM05D001324 ORTHO05D001220 7.4e-06 57.8 103 39.8
TPR.G17315 Trifolium pratense HOM05D001324 ORTHO05D001220 7.4e-06 57.8 243 25.1
BcaC06g32611 Brassica carinata HOM05D001324 ORTHO05D001220 9.7e-06 57.4 214 24.8
BraA03t14892Z Brassica rapa HOM05D001324 ORTHO05D001220 9.7e-06 57.4 214 25.2
ClCG05G004190 Citrullus lanatus HOM05D001324 ORTHO05D001220 9.7e-06 57.4 233 27.9
Migut.D00453 Erythranthe guttata HOM05D001324 ORTHO05D001220 9.7e-06 57.4 597 21.1
Glyma.06G272200 Glycine max HOM05D001324 ORTHO05D001220 9.7e-06 57.4 103 38.8
Lalb_Chr01g0006051 Lupinus albus HOM05D001324 ORTHO05D001220 9.7e-06 57.4 103 38.8
Rhsim13G0037900 Rhododendron simsii HOM05D001324 ORTHO05D001220 9.7e-06 57.4 215 26.0
VMungo1383G1084 Vigna mungo HOM05D001324 ORTHO05D001220 9.7e-06 57.4 265 24.9


User provided reference genes

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