Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0090s0053 Marchantia polymorpha HOM05D041756 ORTHO05D034320 3.4e-289 997.7 523 100.0
CBR_g11067 Chara braunii HOM05D041756 ORTHO05D034320 4.0e-19 100.5 399 25.6
CBR_g26443 Chara braunii HOM05D041756 ORTHO05D034320 2.9e-14 84.3 233 31.3
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 1.5e-10 72.0 342 23.7
Nn1g06534 Nelumbo nucifera HOM05D000397 ORTHO05D002023 1.5e-10 72.0 454 23.6
Actinidia05637 Actinidia chinensis HOM05D000397 ORTHO05D002023 2.0e-10 71.6 311 24.1
Dinv07559 Davidia involucrata HOM05D000397 ORTHO05D002023 4.4e-10 70.5 347 22.8
ATR1096G058 Amborella trichopoda HOM05D000397 ORTHO05D002023 5.8e-10 70.1 319 25.7
Nitab4.5_0007074g0010 Nicotiana tabacum HOM05D000397 ORTHO05D002023 1.3e-09 68.9 422 23.0
Peaxi162Scf00661g00042 Petunia axillaris HOM05D000397 ORTHO05D002023 1.3e-09 68.9 444 21.8
Atru.chr2.2698 Acer truncatum HOM05D000397 ORTHO05D002023 2.2e-09 68.2 488 21.9
CiPaw.09G060200 Carya illinoinensis HOM05D000397 ORTHO05D002023 2.9e-09 67.8 355 23.1
Atru.chr2.2620 Acer truncatum HOM05D000397 ORTHO05D002023 3.7e-09 67.4 489 21.7
SalBow1G2338 Salvia bowleyana HOM05D000397 ORTHO05D002023 4.9e-09 67.0 338 24.6
Psat5g244640 Pisum sativum HOM05D000397 ORTHO05D002023 8.3e-09 66.2 364 25.5
Potri.011G052500 Populus trichocarpa HOM05D000397 ORTHO05D002023 1.1e-08 65.9 458 20.1
CAN.G1164.31 Capsicum annuum HOM05D000397 ORTHO05D002023 1.4e-08 65.5 443 21.4
Lj1C1205T7 Lonicera japonica HOM05D000397 ORTHO05D002023 1.4e-08 65.5 115 33.9
SEGI_09900 Sequoiadendron giganteum HOM05D000397 ORTHO05D002023 1.4e-08 65.5 328 23.5
PGR042G2986 Punica granatum HOM05D000397 ORTHO05D002023 1.9e-08 65.1 125 32.0
Solyc02g078220.1 Solanum lycopersicum HOM05D000397 ORTHO05D002023 2.4e-08 64.7 441 23.4
Nitab4.5_0003432g0080 Nicotiana tabacum HOM05D000397 ORTHO05D002023 3.2e-08 64.3 442 22.4
Atru.chr2.2686 Acer truncatum HOM05D000397 ORTHO05D002023 1.2e-07 62.4 111 30.6
PGSC0003DMG400029723 Solanum tuberosum HOM05D000397 ORTHO05D002023 1.2e-07 62.4 424 22.6
Dinv40561 Davidia involucrata HOM05D000397 ORTHO05D002023 1.6e-07 62.0 450 21.1
MD10G1294900 Malus domestica HOM05D000397 ORTHO05D002023 1.6e-07 62.0 418 20.3
Cfa000459 Carpinus fangiana HOM05D000397 ORTHO05D002023 2.0e-07 61.6 368 22.6
TAR624G1261 Trochodendron aralioides HOM05D000397 ORTHO05D002023 2.0e-07 61.6 453 21.6
Haze_06458 Corylus avellana HOM05D000397 ORTHO05D002023 2.7e-07 61.2 360 22.8
Rhsim13G0178100 Rhododendron simsii HOM05D000397 ORTHO05D002023 3.5e-07 60.8 345 21.4
Sopen02g023080 Solanum pennellii HOM05D000397 ORTHO05D002023 3.5e-07 60.8 441 23.1
Lj3g0026221 Lotus japonicus HOM05D000397 ORTHO05D002023 4.6e-07 60.5 425 23.8
Thecc.07G088700 Theobroma cacao HOM05D000397 ORTHO05D002023 4.6e-07 60.5 425 20.7
AT4G21700 Arabidopsis thaliana HOM05D000397 ORTHO05D002023 6.0e-07 60.1 472 22.7
DCAR_024906 Daucus carota HOM05D000397 ORTHO05D002023 6.0e-07 60.1 138 29.0
TPR.G16507 Trifolium pratense HOM05D000397 ORTHO05D002023 6.0e-07 60.1 466 22.3
Sabra11G0036300 Salix brachista HOM05D000397 ORTHO05D002023 7.8e-07 59.7 461 19.5
Duzib213G0657 Durio zibethinus HOM05D000397 ORTHO05D002023 1.0e-06 59.3 119 30.3
MD11G1246300 Malus domestica HOM05D000397 ORTHO05D002023 1.0e-06 59.3 327 22.9
MSTRG.15886 Avicennia marina HOM05D000397 ORTHO05D002023 1.3e-06 58.9 346 23.1
Thecc.07G088800 Theobroma cacao HOM05D000397 ORTHO05D002023 1.3e-06 58.9 110 33.6
Gohir.D05G356100 Gossypium hirsutum HOM05D000397 ORTHO05D002023 1.7e-06 58.5 397 23.9
TWI12G0252 Tripterygium wilfordii HOM05D004028 ORTHO05D004844 1.7e-06 58.5 144 26.4
Atru.chr10.1878 Acer truncatum HOM05D000397 ORTHO05D002023 2.3e-06 58.2 407 22.6
CARHR228430 Cardamine hirsuta HOM05D000397 ORTHO05D002023 2.3e-06 58.2 473 20.7
CiPaw.11G169100 Carya illinoinensis HOM05D000397 ORTHO05D002023 2.3e-06 58.2 115 29.6
Lj5C65T8 Lonicera japonica HOM05D004028 ORTHO05D004844 2.3e-06 58.2 251 26.3
Pp3c21_16510 Physcomitrium patens HOM05D004354 ORTHO05D005409 2.3e-06 58.2 105 35.2
TAR636G0621 Trochodendron aralioides HOM05D004028 ORTHO05D004844 2.3e-06 58.2 134 31.3
TAR636G1811 Trochodendron aralioides HOM05D004028 ORTHO05D004844 2.3e-06 58.2 134 31.3
Migut.M00810 Erythranthe guttata HOM05D000397 ORTHO05D002023 3.0e-06 57.8 307 27.7
CsaV3_7G032830 Cucumis sativus L. HOM05D004028 ORTHO05D004844 3.9e-06 57.4 180 27.8
Sabra03G0057200 Salix brachista HOM05D000397 ORTHO05D002023 3.9e-06 57.4 344 23.3
Thecc.06G187800 Theobroma cacao HOM05D000397 ORTHO05D002023 3.9e-06 57.4 369 22.5
VMungo0331G0808 Vigna mungo HOM05D004028 ORTHO05D004844 3.9e-06 57.4 110 29.1
COL.COLO4_12855 Corchorus olitorius HOM05D004028 ORTHO05D004844 5.0e-06 57.0 106 33.0
MELO3C023384.2 Cucumis melo HOM05D004028 ORTHO05D004844 5.0e-06 57.0 153 28.1
Duzib235G1412 Durio zibethinus HOM05D000397 ORTHO05D002023 5.0e-06 57.0 385 22.9
ECA236G2946 Erigeron canadensis HOM05D000397 ORTHO05D002036 5.0e-06 57.0 412 22.1
Gohir.A10G078100 Gossypium hirsutum HOM05D004028 ORTHO05D004844 5.0e-06 57.0 158 27.2
Gorai.009G388500 Gossypium raimondii HOM05D000397 ORTHO05D002023 5.0e-06 57.0 397 23.9
Lj5C65T7 Lonicera japonica HOM05D004028 ORTHO05D004844 5.0e-06 57.0 149 28.2
Pp3c19_14220 Physcomitrium patens HOM05D000397 ORTHO05D002023 5.0e-06 57.0 430 20.2
SGA_v2.0_scaffold100G29685 Striga asiatica HOM05D000397 ORTHO05D002023 5.0e-06 57.0 347 24.5
THA.LOC104806284 Tarenaya hassleriana HOM05D000397 ORTHO05D002023 5.0e-06 57.0 452 21.0
CSS0038494 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 6.6e-06 56.6 368 22.6
Glyma.15G074100 Glycine max HOM05D000397 ORTHO05D002023 6.6e-06 56.6 125 28.0
Gohir.A04G030200 Gossypium hirsutum HOM05D000397 ORTHO05D002023 6.6e-06 56.6 394 22.6
MD11G1246600 Malus domestica HOM05D000397 ORTHO05D002023 6.6e-06 56.6 327 22.6
Manes.17G045500 Manihot esculenta HOM05D000397 ORTHO05D002023 6.6e-06 56.6 370 20.8
QL03p071110 Quercus lobata HOM05D000397 ORTHO05D002023 6.6e-06 56.6 125 30.4
CSS0024633 Camellia sinensis var. sinensis HOM05D000397 ORTHO05D002023 8.6e-06 56.2 368 22.3
Eucgr.E03304 Eucalyptus grandis HOM05D000397 ORTHO05D002023 8.6e-06 56.2 329 23.4


User provided reference genes

Program Settings