Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.7e-171 605.9 312 100.0
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 7.9e-124 447.6 306 72.9
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 3.9e-115 418.7 309 68.0
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 6.7e-115 417.9 311 65.9
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 5.3e-112 408.3 309 65.7
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 6.3e-105 384.8 310 61.9
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.0e-102 377.5 321 59.2
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 2.9e-102 375.9 307 61.6
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 3.8e-102 375.6 325 59.4
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 2.1e-100 369.8 320 57.8
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.7e-100 369.4 327 56.9
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.7e-100 369.4 327 56.9
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.5e-98 363.6 323 58.2
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 2.0e-98 363.2 320 58.8
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 3.3e-98 362.5 320 56.6
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 3.3e-98 362.5 317 57.4
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 4.4e-98 362.1 327 55.4
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 9.7e-98 360.9 320 56.9
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.3e-97 360.5 320 57.5
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 1.7e-97 360.1 320 56.2
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 2.2e-97 359.8 328 55.5
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 2.2e-97 359.8 320 57.8
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.2e-97 359.8 323 55.7
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 2.8e-97 359.4 324 56.8
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 3.7e-97 359.0 327 55.7
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 4.8e-97 358.6 328 55.5
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 6.3e-97 358.2 328 56.7
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 8.2e-97 357.8 320 57.5
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 8.2e-97 357.8 328 56.4
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 1.8e-96 356.7 328 55.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 2.4e-96 356.3 328 56.1
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 3.1e-96 355.9 313 58.1
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 4.1e-96 355.5 322 55.9
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 5.3e-96 355.1 320 56.9
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 7.0e-96 354.8 320 55.6
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 7.0e-96 354.8 320 56.6
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 9.1e-96 354.4 324 54.0
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 9.1e-96 354.4 320 55.6
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 3.5e-95 352.4 320 55.3
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 5.9e-95 351.7 328 55.2
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.0e-94 350.9 320 55.3
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.0e-94 350.9 320 55.6
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 1.0e-94 350.9 326 55.2
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.3e-94 350.5 319 55.2
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 2.2e-94 349.7 320 55.6
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 2.9e-94 349.4 320 55.3
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 6.5e-94 348.2 320 55.3
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 6.5e-94 348.2 320 55.3
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 8.5e-94 347.8 320 55.3
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 8.5e-94 347.8 320 55.3
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 1.1e-93 347.4 320 54.7
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 1.1e-93 347.4 320 55.0
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.1e-93 347.4 320 55.3
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 1.1e-93 347.4 320 55.3
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.1e-93 347.4 315 55.6
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 2.5e-93 346.3 320 55.6
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 3.2e-93 345.9 319 55.2
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 3.2e-93 345.9 319 55.2
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 5.5e-93 345.1 322 54.7
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 9.4e-93 344.4 326 54.6
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.2e-92 344.0 319 55.5
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.6e-92 343.6 320 55.3
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.6e-92 343.6 318 54.7
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 2.1e-92 343.2 320 54.7
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 6.1e-92 341.7 319 54.9
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 8.0e-92 341.3 325 53.8
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 1.0e-91 340.9 320 55.0
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.4e-91 340.5 320 53.8
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.4e-91 340.5 320 55.0
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.4e-91 340.5 319 53.6
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.3e-91 339.7 320 54.1
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 4.0e-91 339.0 320 54.7
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 4.0e-91 339.0 319 53.3
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 5.2e-91 338.6 320 55.0
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 5.2e-91 338.6 322 53.7
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 8.8e-91 337.8 320 54.4
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 1.2e-90 337.4 320 54.1
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.5e-90 337.0 320 54.4
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 1.5e-90 337.0 320 54.1
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.5e-90 337.0 321 53.0
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 5.7e-90 335.1 320 54.1
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 7.5e-90 334.7 317 53.0
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 7.5e-90 334.7 320 53.4
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 9.8e-90 334.3 320 54.1
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 9.8e-90 334.3 320 54.1
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 1.3e-89 334.0 323 53.3
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.1e-88 330.9 291 57.7
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 3.1e-88 329.3 320 52.2
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.6e-87 327.0 326 52.5
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.6e-87 327.0 315 51.7
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.6e-87 327.0 319 51.7
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.2e-86 323.2 309 53.7
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.2e-86 323.2 309 53.7
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 7.2e-85 318.2 303 54.5
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 2.4e-80 303.1 312 52.2
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.2e-80 301.2 300 52.0
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.5e-79 299.3 300 51.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.0e-78 297.7 319 50.2
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 5.0e-78 295.4 297 51.5
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 7.3e-77 291.6 312 49.7
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 2.1e-76 290.0 305 50.2
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.4e-75 287.3 318 49.1
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 6.4e-73 278.5 258 55.4
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 2.8e-68 263.1 268 51.9
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.5e-66 257.3 287 47.7
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 7.0e-64 248.4 214 57.9
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 9.2e-64 248.1 212 56.1
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.2e-63 247.7 277 49.8
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.0e-62 244.6 281 46.3
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-60 237.7 257 50.6
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 2.3e-59 233.4 227 53.7
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.8e-51 205.3 306 41.5
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 4.5e-34 149.4 264 36.7
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 1.1e-32 144.8 289 34.6
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.9e-32 144.1 104 67.3
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 3.9e-30 136.3 65 96.9
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.1e-29 134.8 103 67.0
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 2.8e-28 130.2 328 30.2
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.5e-26 124.4 129 48.1
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 8.4e-25 118.6 349 29.5
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.1e-23 114.0 121 47.1
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.8e-22 110.9 95 56.8
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.0e-17 95.1 95 52.6
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 1.9e-16 90.9 62 66.1
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 3.2e-16 90.1 72 61.1
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.3e-14 84.0 114 38.6


User provided reference genes

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