Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 0.0e+00 1412.5 709 100.0
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 4.3e-85 320.1 713 35.5
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.1e-77 295.4 620 35.5
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 7.4e-61 239.6 526 32.7
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 3.7e-60 237.3 629 31.0
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 1.8e-59 235.0 522 32.4
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.6e-58 231.9 600 32.3
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 7.7e-58 229.6 524 32.1
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 1.3e-57 228.8 615 31.2
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.3e-57 228.8 530 31.9
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 6.5e-57 226.5 622 31.0
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 6.5e-57 226.5 607 30.3
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 8.5e-57 226.1 612 30.1
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 1.1e-56 225.7 521 32.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 1.1e-56 225.7 521 32.1
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 3.2e-56 224.2 618 30.9
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 3.2e-56 224.2 520 31.2
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 5.5e-56 223.4 618 30.7
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 7.2e-56 223.0 515 32.4
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 1.2e-55 222.2 648 28.9
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 1.6e-55 221.9 590 30.5
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 2.1e-55 221.5 588 30.3
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 2.1e-55 221.5 596 30.5
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 2.7e-55 221.1 516 31.2
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 2.7e-55 221.1 592 30.4
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 2.7e-55 221.1 530 30.8
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 3.6e-55 220.7 608 30.8
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 6.1e-55 219.9 521 32.2
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 6.1e-55 219.9 522 31.8
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 6.1e-55 219.9 591 30.3
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 8.0e-55 219.5 504 32.1
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 8.0e-55 219.5 609 30.0
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 1.4e-54 218.8 626 28.8
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 1.8e-54 218.4 659 29.9
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.8e-54 218.4 601 30.6
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 3.0e-54 217.6 595 30.1
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 4.0e-54 217.2 597 30.3
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 6.7e-54 216.5 628 28.8
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 8.8e-54 216.1 641 28.9
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 2.0e-53 214.9 595 30.8
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.6e-53 214.5 640 29.7
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 3.3e-53 214.2 591 30.1
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 4.4e-53 213.8 630 29.4
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 5.7e-53 213.4 521 30.9
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 7.5e-53 213.0 601 29.6
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 9.7e-53 212.6 649 30.0
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 9.7e-53 212.6 531 30.7
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.3e-52 212.2 585 29.9
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.7e-52 211.8 607 30.0
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 3.7e-52 210.7 610 30.2
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 4.8e-52 210.3 589 30.6
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 6.3e-52 209.9 604 29.6
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 6.3e-52 209.9 581 29.3
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 6.3e-52 209.9 600 30.2
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 6.3e-52 209.9 603 29.2
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.1e-51 209.1 582 30.2
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 1.4e-51 208.8 589 30.2
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 2.4e-51 208.0 619 28.6
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 3.1e-51 207.6 616 29.7
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 4.1e-51 207.2 616 30.0
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 5.3e-51 206.8 523 30.2
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 5.3e-51 206.8 606 29.9
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 5.3e-51 206.8 526 30.0
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 7.0e-51 206.5 525 32.2
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 9.1e-51 206.1 245 46.5
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 1.2e-50 205.7 625 28.3
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 2.0e-50 204.9 594 29.1
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 2.7e-50 204.5 611 30.8
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.7e-50 204.5 497 31.2
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 5.9e-50 203.4 633 29.4
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.0e-49 202.6 621 29.1
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 1.3e-49 202.2 630 28.6
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 2.2e-49 201.4 223 48.0
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 2.9e-49 201.1 518 29.0
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 8.5e-49 199.5 611 28.6
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 1.5e-48 198.7 594 28.8
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 2.5e-48 198.0 619 28.4
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 2.5e-48 198.0 611 29.1
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 3.2e-48 197.6 619 29.6
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 4.2e-48 197.2 603 28.9
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.5e-48 196.8 596 29.0
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.5e-48 196.8 596 28.9
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 5.5e-48 196.8 613 29.0
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 9.4e-48 196.1 596 28.9
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 1.6e-47 195.3 623 28.9
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 3.6e-47 194.1 590 29.8
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.4e-46 192.2 594 29.0
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 4.0e-46 190.7 592 29.4
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.2e-46 190.3 594 28.8
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 6.8e-46 189.9 598 28.8
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 6.8e-46 189.9 632 26.9
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 4.4e-45 187.2 594 30.3
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 5.7e-45 186.8 601 26.1
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 8.3e-44 183.0 534 28.3
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.1e-43 182.6 637 28.3
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 1.6e-42 178.7 619 27.1
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 7.7e-42 176.4 716 28.9
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 5.0e-41 173.7 651 27.6
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.5e-40 172.2 513 28.1
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 3.6e-39 167.5 243 40.3
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 6.1e-39 166.8 241 38.6
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 1.4e-38 165.6 389 31.9
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 1.5e-37 162.2 628 27.2
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.4e-37 161.0 563 27.9
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 5.9e-34 150.2 191 44.0
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 7.5e-29 133.3 180 42.2
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.6e-23 115.5 160 42.5
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 4.4e-21 107.5 197 37.6
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 5.0e-17 94.0 94 46.8
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 5.2e-14 84.0 155 33.5
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 1.2e-13 82.8 212 31.6
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.9e-11 75.5 200 30.5
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 7.1e-11 73.6 178 31.5
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 2.7e-10 71.6 55 52.7
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 3.5e-10 71.2 201 31.3
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 5.1e-09 67.4 142 32.4
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 2.5e-08 65.1 237 29.1
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 2.5e-08 65.1 166 38.0
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.8e-07 61.6 58 50.0


User provided reference genes

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