Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.0e-194 682.2 327 100.0
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.3e-124 450.3 295 67.8
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 4.1e-123 445.3 303 66.0
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 7.0e-123 444.5 303 64.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 4.5e-122 441.8 298 65.8
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 4.5e-122 441.8 306 64.1
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 5.9e-122 441.4 302 65.9
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 5.9e-122 441.4 302 65.6
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.3e-121 440.3 298 65.4
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 2.3e-121 439.5 302 64.2
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 3.9e-121 438.7 302 63.6
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.9e-121 438.7 302 64.2
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 5.0e-121 438.3 302 64.2
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 6.6e-121 438.0 302 64.6
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 6.6e-121 438.0 298 65.4
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.5e-120 436.8 302 63.6
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 1.9e-120 436.4 303 63.7
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.9e-120 436.4 298 65.8
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 2.5e-120 436.0 302 64.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 2.5e-120 436.0 309 64.1
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 4.3e-120 435.3 303 66.0
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 4.3e-120 435.3 302 63.9
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 4.3e-120 435.3 302 63.6
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 5.6e-120 434.9 302 64.9
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 7.3e-120 434.5 295 65.8
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 7.3e-120 434.5 303 64.7
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.1e-119 433.0 302 63.6
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.8e-119 432.6 302 64.6
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 2.8e-119 432.6 306 63.4
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.8e-118 429.9 302 62.3
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 2.3e-118 429.5 303 62.7
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.0e-118 428.7 298 64.4
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 4.0e-118 428.7 305 63.0
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 6.8e-118 427.9 300 63.7
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 6.8e-118 427.9 302 64.2
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 6.8e-118 427.9 304 64.1
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.2e-117 427.2 302 61.9
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.2e-117 427.2 302 63.9
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 1.5e-117 426.8 302 62.6
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 3.4e-117 425.6 302 62.6
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 7.5e-117 424.5 302 63.2
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 7.5e-117 424.5 302 62.9
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 2.2e-116 422.9 302 61.3
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 2.4e-115 419.5 304 62.2
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 4.1e-115 418.7 303 63.4
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 4.1e-115 418.7 302 62.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 7.0e-115 417.9 304 62.5
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.6e-114 416.8 302 62.6
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.7e-114 416.0 307 61.2
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.7e-114 416.0 307 61.2
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.7e-114 416.0 307 61.2
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.7e-114 416.0 307 61.2
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 6.0e-114 414.8 306 62.4
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 6.0e-114 414.8 307 60.9
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 6.0e-114 414.8 302 61.9
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 1.3e-113 413.7 309 62.5
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.6e-113 411.0 295 63.4
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 4.3e-112 408.7 296 62.5
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 5.6e-112 408.3 298 62.1
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 1.2e-111 407.1 302 60.9
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 2.8e-111 406.0 298 62.4
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 1.8e-110 403.3 308 59.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 4.4e-109 398.7 302 60.3
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.7e-108 396.7 302 60.6
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.7e-108 395.6 261 66.3
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 3.0e-105 386.0 302 58.3
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 2.5e-104 382.9 308 58.8
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 9.5e-104 380.9 271 63.1
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.1e-103 379.8 302 58.3
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 2.8e-103 379.4 285 61.1
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 8.1e-103 377.9 354 52.0
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.8e-102 376.7 405 47.4
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 4.4e-101 372.1 263 62.7
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 8.6e-97 357.8 292 56.2
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 1.5e-96 357.1 325 54.5
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 6.2e-95 351.7 270 61.5
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 8.1e-95 351.3 305 52.5
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.5e-90 335.9 243 63.8
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.5e-85 320.5 302 51.3
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 2.0e-85 320.1 298 52.7
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 6.4e-84 315.1 254 57.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.8e-78 297.0 338 47.0
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 6.5e-68 261.9 180 66.1
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 4.2e-67 259.2 266 49.6
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.2e-66 257.7 186 64.5
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.0e-65 253.1 302 44.4
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 1.9e-59 233.8 177 59.9
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 2.7e-58 229.9 161 65.2
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.7e-58 229.9 160 63.1
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 3.5e-58 229.6 156 65.4
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.8e-57 227.3 160 63.1
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 1.8e-57 227.3 160 62.5
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 3.9e-57 226.1 156 64.1
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 6.7e-57 225.3 160 64.4
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 6.7e-57 225.3 160 61.9
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 6.7e-57 225.3 160 62.5
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 8.7e-57 224.9 156 64.1
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 3.3e-56 223.0 160 63.1
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 3.3e-56 223.0 160 61.9
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 5.7e-56 222.2 161 64.0
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 1.6e-55 220.7 156 63.5
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 5.7e-48 195.7 177 53.1
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 2.6e-45 186.8 119 68.1
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.3e-44 184.5 121 66.1
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 1.3e-44 184.5 121 66.1
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.1e-43 181.4 132 59.8
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.4e-43 181.0 121 64.5
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 2.1e-42 177.2 122 64.8
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 2.1e-42 177.2 121 64.5
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 2.1e-42 177.2 121 63.6
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 4.7e-42 176.0 121 63.6
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 4.7e-42 176.0 121 63.6
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 2.3e-41 173.7 121 62.8
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 5.1e-41 172.6 121 62.0
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 6.7e-41 172.2 121 62.0
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 4.4e-40 169.5 124 59.7
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 3.1e-38 163.3 116 58.6
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 5.3e-38 162.5 122 58.2
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 4.2e-35 152.9 111 58.6
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 5.5e-35 152.5 141 53.9
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 1.2e-29 134.8 101 58.4
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.9e-27 127.5 101 55.4
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 3.6e-26 123.2 88 59.1
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 5.4e-22 109.4 78 60.3
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 9.1e-22 108.6 68 70.6
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 1.2e-21 108.2 71 66.2
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 3.6e-18 96.7 241 28.6
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 4.7e-18 96.3 64 67.2
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 3.5e-13 80.1 68 54.4
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.7e-12 77.8 63 55.6
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 1.8e-09 67.8 51 52.9
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 4.0e-09 66.6 65 47.7
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 4.9e-07 59.7 34 73.5
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 6.4e-07 59.3 40 60.0


User provided reference genes

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