Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 0.0e+00 1267.3 669 100.0
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 2.0e-100 370.9 573 43.1
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 3.0e-88 330.5 569 40.1
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 8.2e-86 322.4 590 38.3
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.9e-83 313.9 585 37.8
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 5.0e-83 313.2 609 38.4
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 2.1e-81 307.8 583 38.9
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 6.7e-80 302.8 574 38.2
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 4.8e-78 296.6 574 38.0
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.1e-77 295.4 580 37.6
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.4e-77 295.0 579 38.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.8e-77 294.7 579 37.0
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 9.1e-77 292.4 618 35.4
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 1.6e-76 291.6 582 36.9
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 5.9e-76 289.7 603 36.7
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 1.0e-75 288.9 569 37.4
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 2.2e-75 287.7 576 36.5
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 6.5e-75 286.2 566 38.0
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 8.5e-75 285.8 586 37.9
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.1e-74 285.4 607 36.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 3.2e-74 283.9 604 36.8
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 9.4e-74 282.3 578 36.7
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 1.6e-73 281.6 552 37.0
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 2.1e-73 281.2 574 37.5
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 6.1e-73 279.6 570 36.3
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 2.3e-72 277.7 554 36.6
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 3.0e-72 277.3 598 35.6
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 4.0e-72 276.9 581 36.1
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 5.2e-72 276.6 590 35.9
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.2e-71 275.4 579 35.8
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 4.4e-71 273.5 612 35.6
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 4.4e-71 273.5 571 35.9
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 5.7e-71 273.1 582 37.1
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.8e-70 270.8 577 36.2
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 4.8e-70 270.0 599 35.4
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.8e-70 270.0 579 35.4
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 4.8e-70 270.0 576 35.4
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 8.3e-70 269.2 564 36.2
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.4e-69 268.5 569 37.1
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.1e-69 267.3 570 36.8
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 4.1e-69 266.9 568 36.1
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 4.1e-69 266.9 575 35.5
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 4.1e-69 266.9 603 35.7
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 4.1e-69 266.9 603 35.7
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 4.1e-69 266.9 570 35.1
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 7.0e-69 266.2 570 35.8
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 9.1e-69 265.8 573 34.7
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 9.1e-69 265.8 581 35.8
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 9.1e-69 265.8 570 36.0
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.2e-68 265.4 566 36.4
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 1.6e-68 265.0 624 34.1
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.6e-68 265.0 563 34.8
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 2.0e-68 264.6 711 32.8
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 3.5e-68 263.8 565 35.6
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 3.5e-68 263.8 570 36.1
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.0e-67 262.3 569 35.3
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 1.3e-67 261.9 566 35.5
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.3e-67 261.9 563 35.5
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 1.3e-67 261.9 592 35.6
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 1.7e-67 261.5 568 35.7
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 2.3e-67 261.2 566 35.2
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 3.8e-67 260.4 566 35.2
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 1.1e-66 258.8 566 35.0
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.9e-66 258.1 608 34.7
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.2e-65 255.4 602 33.9
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.6e-65 255.0 568 33.8
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 4.7e-65 253.4 578 35.3
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 4.7e-65 253.4 582 36.6
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 1.0e-64 252.3 583 35.8
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.5e-63 248.4 514 37.9
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 2.0e-63 248.1 612 32.8
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 2.6e-63 247.7 619 33.3
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 3.4e-63 247.3 573 32.6
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 5.7e-63 246.5 578 34.1
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.5e-63 246.1 583 34.0
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 3.7e-62 243.8 582 33.7
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.3e-62 243.0 615 33.5
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 4.5e-60 236.9 572 33.6
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 2.3e-59 234.6 584 32.7
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 6.6e-59 233.0 564 33.9
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.3e-58 230.3 489 36.6
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 4.3e-58 230.3 581 33.6
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 2.1e-57 228.0 462 36.6
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 5.2e-56 223.4 329 41.9
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 6.8e-56 223.0 572 33.4
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.6e-51 206.5 640 31.1
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 1.6e-49 201.8 344 40.4
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 2.8e-49 201.1 450 35.3
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.9e-42 178.3 577 30.8
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 2.1e-41 174.9 392 34.7
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 1.1e-40 172.6 417 33.6
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.0e-40 170.6 601 29.8
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 1.9e-37 161.8 415 33.7
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 7.1e-37 159.8 349 36.4
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.3e-34 150.6 471 30.6
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.2e-33 149.1 229 38.9
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.2e-33 149.1 392 32.4
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 6.8e-32 143.3 471 29.3
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 7.3e-26 123.2 416 29.8
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.7e-20 104.8 117 41.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 4.6e-20 104.0 117 40.2
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 5.1e-19 100.5 184 36.4
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 4.3e-18 97.4 105 43.8
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-17 95.9 93 46.2
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 4.8e-17 94.0 143 43.4
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 2.5e-10 71.6 241 32.4
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.6e-10 70.5 165 27.9
MCO12G226 Micromonas commoda HOM05D006816 ORTHO05D008666 1.2e-07 62.8 560 21.8
Cre12.g521500 Chlamydomonas reinhardtii HOM05D006816 ORTHO05D008666 4.9e-06 57.4 82 39.0


User provided reference genes

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