Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 7.2e-265 916.8 489 100.0
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 9.6e-100 368.2 485 41.0
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 7.3e-92 342.0 488 41.4
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 2.0e-89 334.0 490 40.6
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 1.4e-87 327.8 481 40.5
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 9.3e-87 325.1 488 40.2
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 2.7e-86 323.6 490 40.8
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 4.6e-86 322.8 492 40.2
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.3e-85 321.2 488 40.6
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 8.7e-85 318.5 492 38.8
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 3.3e-84 316.6 450 42.0
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 2.1e-83 313.9 484 40.3
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 2.8e-83 313.5 488 38.9
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 3.6e-83 313.2 480 39.4
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 4.8e-83 312.8 503 39.6
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 6.2e-83 312.4 492 38.8
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.4e-82 311.2 492 39.4
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 3.1e-82 310.1 493 39.8
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 4.0e-82 309.7 482 38.6
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 4.0e-82 309.7 498 38.0
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 9.0e-82 308.5 482 38.2
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 1.5e-81 307.8 489 39.5
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 2.0e-81 307.4 495 37.8
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 2.6e-81 307.0 492 38.2
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 3.4e-81 306.6 493 38.3
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 4.5e-81 306.2 481 39.1
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 5.8e-81 305.8 489 38.9
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 7.6e-81 305.4 492 39.0
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 7.6e-81 305.4 484 39.7
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 9.9e-81 305.1 483 39.8
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 9.9e-81 305.1 484 39.5
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 2.2e-80 303.9 490 39.0
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 2.9e-80 303.5 482 38.4
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 2.9e-80 303.5 490 38.8
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 6.4e-80 302.4 487 38.2
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.4e-79 300.4 485 39.4
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 2.4e-79 300.4 484 39.3
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 4.2e-79 299.7 492 37.6
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 4.2e-79 299.7 489 38.0
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 4.2e-79 299.7 489 37.6
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 9.3e-79 298.5 488 37.5
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 1.2e-78 298.1 480 38.5
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.2e-78 298.1 486 38.1
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.6e-78 297.7 492 39.2
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.6e-78 297.7 492 39.2
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 1.6e-78 297.7 492 37.6
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 2.1e-78 297.4 529 36.1
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 2.1e-78 297.4 488 38.1
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 2.1e-78 297.4 484 37.8
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 2.1e-78 297.4 509 36.7
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 2.7e-78 297.0 483 40.0
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.5e-78 296.6 493 37.7
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 4.6e-78 296.2 489 37.6
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 7.9e-78 295.4 482 38.2
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 7.9e-78 295.4 482 37.8
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.8e-77 294.3 488 38.3
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.8e-77 294.3 491 37.7
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 2.3e-77 293.9 492 38.4
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 3.0e-77 293.5 487 38.2
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 3.9e-77 293.1 483 39.5
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 3.9e-77 293.1 486 37.0
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 5.1e-77 292.7 490 38.0
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 6.7e-77 292.4 483 39.1
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 6.7e-77 292.4 482 39.2
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 8.7e-77 292.0 488 38.1
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 8.7e-77 292.0 483 38.7
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.1e-76 291.6 504 36.9
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.9e-76 290.8 483 38.3
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.5e-76 290.4 483 38.1
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 2.5e-76 290.4 491 36.0
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 3.3e-76 290.0 483 39.1
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.3e-76 290.0 484 37.4
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 7.4e-76 288.9 491 37.3
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 9.6e-76 288.5 495 36.6
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 1.6e-75 287.7 481 37.6
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-75 287.7 483 37.9
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 5.8e-73 279.3 517 35.2
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.6e-73 278.9 487 37.0
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.0e-72 278.5 487 35.7
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.3e-72 278.1 518 35.1
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 3.8e-72 276.6 376 41.2
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 8.4e-72 275.4 492 35.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.1e-71 275.0 485 37.5
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 5.5e-71 272.7 488 35.2
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.3e-69 268.1 495 36.8
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 2.3e-69 267.3 449 37.0
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 5.1e-69 266.2 488 34.6
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 7.4e-68 262.3 362 40.3
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 1.3e-67 261.5 378 39.7
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 8.2e-67 258.8 488 34.6
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.1e-66 258.5 492 35.0
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 1.8e-66 257.7 326 43.6
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.3e-64 251.5 440 35.7
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 1.2e-62 245.0 488 34.4
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 1.6e-62 244.6 507 34.5
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 8.7e-61 238.8 377 37.1
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 4.3e-60 236.5 315 41.9
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 5.7e-60 236.1 489 33.1
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.2e-59 234.2 518 34.6
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.7e-56 224.6 449 35.2
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 7.2e-55 219.2 343 38.5
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 5.0e-48 196.4 382 35.3
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 2.3e-45 187.6 508 31.9
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 5.2e-45 186.4 385 34.0
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 3.3e-44 183.7 190 50.5
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 8.2e-43 179.1 268 41.0
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 3.1e-42 177.2 351 34.2
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 1.0e-40 172.2 351 33.3
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 1.8e-37 161.4 361 32.1
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 4.0e-37 160.2 342 34.5
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 1.3e-32 145.2 441 27.9
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.1e-31 142.1 420 30.5
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.5e-31 141.7 172 45.3
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 1.5e-31 141.7 346 31.8
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 1.4e-29 135.2 502 27.1
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 6.5e-24 116.3 202 37.6
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 1.5e-23 115.2 328 27.7
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.8e-18 98.2 123 43.9
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 5.2e-13 80.1 133 39.1
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.5e-12 78.6 85 43.5
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 9.5e-07 59.3 55 54.5
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 2.8e-06 57.8 100 36.0


User provided reference genes

Program Settings