Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.8e-281 971.8 459 100.0
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 2.0e-136 490.0 375 61.3
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.0e-135 487.6 371 61.2
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 3.9e-135 485.7 356 63.5
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.0e-135 485.3 360 62.8
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 5.0e-135 485.3 380 60.0
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 6.6e-135 485.0 352 62.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 8.6e-135 484.6 361 62.3
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 1.1e-134 484.2 355 62.8
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 1.1e-134 484.2 437 54.7
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 1.5e-134 483.8 385 60.0
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.5e-134 483.8 358 62.0
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 3.3e-134 482.6 360 61.4
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 7.3e-134 481.5 358 62.3
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 7.3e-134 481.5 363 62.3
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 9.5e-134 481.1 357 62.5
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.2e-133 480.7 356 62.1
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.6e-133 480.3 442 55.0
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 1.6e-133 480.3 356 61.2
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 2.8e-133 479.6 357 63.0
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 3.6e-133 479.2 357 63.3
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.6e-133 479.2 383 59.8
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.2e-133 478.4 356 61.5
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 6.2e-133 478.4 355 60.8
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 8.0e-133 478.0 355 62.8
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.0e-132 477.6 363 61.7
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.0e-132 477.6 353 61.5
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 1.0e-132 477.6 360 61.1
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 1.8e-132 476.9 361 60.9
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 1.8e-132 476.9 364 60.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 3.1e-132 476.1 356 61.2
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 3.1e-132 476.1 356 61.5
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 4.0e-132 475.7 357 61.3
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 4.0e-132 475.7 372 60.2
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 4.0e-132 475.7 356 61.2
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 4.0e-132 475.7 357 61.1
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.2e-132 475.3 368 60.9
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 5.2e-132 475.3 357 60.8
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 5.2e-132 475.3 356 61.2
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 6.8e-132 474.9 360 61.9
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 6.8e-132 474.9 352 62.8
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 6.8e-132 474.9 359 60.4
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 8.9e-132 474.6 373 59.5
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.2e-131 474.2 356 59.8
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 1.2e-131 474.2 359 60.7
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.2e-131 474.2 357 61.1
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 1.2e-131 474.2 353 61.2
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.5e-131 473.8 356 61.5
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 2.0e-131 473.4 360 61.9
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 2.0e-131 473.4 358 61.7
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 2.0e-131 473.4 353 61.2
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 3.4e-131 472.6 371 59.8
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 3.4e-131 472.6 356 61.2
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 3.4e-131 472.6 357 61.1
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.4e-131 472.2 356 62.1
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 4.4e-131 472.2 356 62.1
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 5.8e-131 471.9 353 61.5
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 5.8e-131 471.9 437 53.5
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 1.3e-130 470.7 357 60.8
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 2.2e-130 469.9 357 61.9
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.2e-130 469.9 435 54.9
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 2.9e-130 469.5 364 60.2
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 2.9e-130 469.5 357 59.9
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.9e-130 469.5 358 58.4
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 2.9e-130 469.5 358 62.3
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 3.7e-130 469.2 383 58.5
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 3.7e-130 469.2 372 59.7
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 3.7e-130 469.2 356 59.8
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 4.9e-130 468.8 383 58.2
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.9e-130 468.8 437 53.3
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 6.4e-130 468.4 371 59.6
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 8.3e-130 468.0 431 54.1
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 8.3e-130 468.0 356 61.5
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 8.3e-130 468.0 356 61.2
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 1.1e-129 467.6 357 62.5
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 1.4e-129 467.2 364 60.2
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.4e-129 467.2 356 62.1
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 1.4e-129 467.2 356 60.1
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 2.4e-129 466.5 383 58.0
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 2.4e-129 466.5 383 58.0
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 4.1e-129 465.7 357 62.2
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 5.4e-129 465.3 356 62.6
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 5.4e-129 465.3 357 59.7
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 5.4e-129 465.3 357 61.3
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.4e-129 465.3 358 61.2
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 7.0e-129 464.9 383 58.0
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 7.0e-129 464.9 362 60.2
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.6e-128 463.8 360 59.7
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.6e-128 463.8 356 60.7
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 1.6e-128 463.8 361 60.9
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 1.6e-128 463.8 356 60.7
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 3.5e-128 462.6 356 60.1
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 4.6e-128 462.2 357 60.5
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 6.0e-128 461.8 348 61.5
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 7.8e-128 461.5 356 60.4
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 7.8e-128 461.5 356 60.4
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 1.0e-127 461.1 359 60.4
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 2.3e-127 459.9 364 58.5
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 2.3e-127 459.9 345 62.0
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 3.0e-127 459.5 359 60.7
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 1.1e-126 457.6 360 59.4
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 1.5e-126 457.2 356 60.4
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 1.9e-126 456.8 364 57.7
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 3.3e-126 456.1 357 60.2
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 1.6e-125 453.8 357 59.4
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 8.1e-125 451.4 357 60.2
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 8.1e-125 451.4 356 57.6
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 3.1e-124 449.5 366 58.7
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 2.6e-123 446.4 343 61.2
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 3.4e-123 446.0 347 55.9
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.9e-122 442.2 356 59.0
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 6.4e-122 441.8 343 59.5
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.4e-121 440.7 361 56.8
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.2e-120 437.6 335 60.9
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.0e-111 407.9 356 56.2
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.8e-108 397.1 292 61.6
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 3.0e-103 379.8 282 60.6
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.1e-100 371.3 356 50.6
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 2.2e-98 363.6 357 50.7
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 4.8e-85 319.3 341 47.5
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 8.4e-82 308.5 300 49.3
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 8.7e-79 298.5 216 60.6
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 3.6e-72 276.6 217 60.4
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.8e-68 264.2 210 61.0
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.4e-52 210.7 189 55.6
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.2e-40 171.8 184 48.4
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 4.6e-19 100.1 58 72.4
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.1e-16 91.3 98 45.9
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 4.4e-14 83.6 113 41.6
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 6.0e-11 73.2 81 48.1


User provided reference genes

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