Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0105 Marchantia polymorpha HOM05D000012 ORTHO05D255492 3.1e-218 761.5 391 100.0
Mapoly0027s0134 Marchantia polymorpha HOM05D000012 ORTHO05D253783 5.9e-68 262.3 400 38.5
Mapoly0072s0060 Marchantia polymorpha HOM05D000012 ORTHO05D256605 2.2e-67 260.4 397 38.3
Mapoly0027s0136 Marchantia polymorpha HOM05D000012 ORTHO05D251502 6.3e-54 215.7 386 34.7
Mapoly0027s0133 Marchantia polymorpha HOM05D000012 ORTHO05D255850 3.5e-52 209.9 385 33.8
AagrBONN_evm.TU.Sc2ySwM_228.3591 Anthoceros agrestis HOM05D000012 ORTHO05D018362 1.9e-29 134.4 392 26.8
Pp3c14_23410 Physcomitrium patens HOM05D000012 ORTHO05D018362 1.6e-28 131.3 387 28.7
Pp3c20_6850 Physcomitrium patens HOM05D000012 ORTHO05D018362 2.7e-28 130.6 361 29.4
Pp3c17_20530 Physcomitrium patens HOM05D000012 ORTHO05D018362 3.0e-27 127.1 398 27.6
AagrBONN_evm.TU.Sc2ySwM_369.273 Anthoceros agrestis HOM05D000012 ORTHO05D018362 6.6e-27 125.9 390 29.0
SEGI_10046 Sequoiadendron giganteum HOM05D000012 ORTHO05D018362 4.3e-26 123.2 416 27.9
Mapoly0052s0077 Marchantia polymorpha HOM05D000012 ORTHO05D018362 5.6e-26 122.9 394 29.2
Rhsim05G0206400 Rhododendron simsii HOM05D000012 ORTHO05D000567 3.6e-09 67.0 184 25.0
CANSAT78G1890 Cannabis sativa HOM05D000012 ORTHO05D000567 8.1e-09 65.9 204 27.9
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 1.1e-08 65.5 189 25.9
Manes.18G018900 Manihot esculenta HOM05D000012 ORTHO05D000567 2.4e-08 64.3 206 26.7
Sopen07g004440 Solanum pennellii HOM05D000012 ORTHO05D000567 2.4e-08 64.3 408 22.8
ECA246G3397 Erigeron canadensis HOM05D000012 ORTHO05D000856 3.1e-08 63.9 267 24.0
Actinidia13777 Actinidia chinensis HOM05D000012 ORTHO05D000567 6.9e-08 62.8 182 24.2
Solyc07g008520.3 Solanum lycopersicum HOM05D000012 ORTHO05D000567 9.0e-08 62.4 204 26.0
Migut.N00822 Erythranthe guttata HOM05D000012 ORTHO05D000567 1.2e-07 62.0 187 28.9
FAN03G3102 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.2e-07 62.0 204 25.5
Potri.002G029200 Populus trichocarpa HOM05D000012 ORTHO05D000567 1.5e-07 61.6 199 27.1
Phvul.008G107200 Phaseolus vulgaris HOM05D000012 ORTHO05D000567 2.0e-07 61.2 168 27.4
Nitab4.5_0000577g0010 Nicotiana tabacum HOM05D000012 ORTHO05D000567 2.6e-07 60.8 368 23.1
Potri.005G233500 Populus trichocarpa HOM05D000012 ORTHO05D000567 5.8e-07 59.7 206 27.2
Ca_18202_v3 Cicer arietinum L. HOM05D000012 ORTHO05D000567 7.6e-07 59.3 191 28.3
DCAR_027791 Daucus carota HOM05D000012 ORTHO05D000978 7.6e-07 59.3 412 23.1
HanXRQChr01g0011111 Helianthus annuus HOM05D000012 ORTHO05D000567 7.6e-07 59.3 200 25.0
Os01g0902700 Oryza sativa ssp. japonica HOM05D000012 ORTHO05D000567 9.9e-07 58.9 190 26.3
Peaxi162Scf00064g00530 Petunia axillaris HOM05D000012 ORTHO05D000567 9.9e-07 58.9 377 22.3
THA.LOC104824110 Tarenaya hassleriana HOM05D000012 ORTHO05D000567 9.9e-07 58.9 240 25.4
AT2G02040 Arabidopsis thaliana HOM05D000012 ORTHO05D000567 1.3e-06 58.5 191 25.7
TWI31G0265 Tripterygium wilfordii HOM05D000012 ORTHO05D000567 1.3e-06 58.5 211 24.6
Zm00001eb146380 Zea mays HOM05D000012 ORTHO05D020938 1.3e-06 58.5 348 22.1
DCAR_008470 Daucus carota HOM05D000012 ORTHO05D000978 1.7e-06 58.2 451 21.7
Dinv37080 Davidia involucrata HOM05D000012 ORTHO05D000567 1.7e-06 58.2 189 24.3
Migut.C00780 Erythranthe guttata HOM05D000012 ORTHO05D000567 1.7e-06 58.2 182 28.0
unitig_26.g9035 Utricularia gibba HOM05D000012 ORTHO05D000567 1.7e-06 58.2 225 23.1
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 2.2e-06 57.8 191 26.7
AL5G11250 Arabidopsis lyrata HOM05D000012 ORTHO05D000567 2.2e-06 57.8 191 26.2
FAN08G0421 Fragaria x ananassa HOM05D000012 ORTHO05D000978 2.9e-06 57.4 447 22.1
Sc07g0002040 Simmondsia chinensis HOM05D000012 ORTHO05D000567 2.9e-06 57.4 240 22.9
HPP92_018191 Vanilla planifolia HOM05D000012 ORTHO05D000567 2.9e-06 57.4 206 24.8
CSS0036614 Camellia sinensis var. sinensis HOM05D000012 ORTHO05D000567 3.8e-06 57.0 244 25.8
CANSAT78G0312 Cannabis sativa HOM05D000012 ORTHO05D000567 3.8e-06 57.0 203 26.6
DCAR_024033 Daucus carota HOM05D000012 ORTHO05D000567 3.8e-06 57.0 184 25.0
ECA247G1599 Erigeron canadensis HOM05D000012 ORTHO05D000567 3.8e-06 57.0 239 24.7
FvH4_5g00150 Fragaria vesca HOM05D000012 ORTHO05D000978 3.8e-06 57.0 450 22.2
Medtr3g112470 Medicago truncatula HOM05D000012 ORTHO05D000567 3.8e-06 57.0 183 28.4
Aa31LG1G470 Aethionema arabicum HOM05D000012 ORTHO05D000567 4.9e-06 56.6 191 25.7
Thhalv10003893m.g Eutrema salsugineum HOM05D000012 ORTHO05D000567 4.9e-06 56.6 192 27.1
Lalb_Chr13g0293201 Lupinus albus HOM05D000012 ORTHO05D000567 4.9e-06 56.6 195 25.1
arahy.Tifrunner.gnm1.ann1.845H1J Arachis hypogaea HOM05D000012 ORTHO05D000567 6.4e-06 56.2 236 26.3
arahy.Tifrunner.gnm1.ann1.8D42MP Arachis hypogaea HOM05D000012 ORTHO05D000567 6.4e-06 56.2 236 26.3
Nitab4.5_0001091g0020 Nicotiana tabacum HOM05D000012 ORTHO05D000567 6.4e-06 56.2 187 27.8
arahy.Tifrunner.gnm1.ann1.HIUE3G Arachis hypogaea HOM05D000012 ORTHO05D001372 8.4e-06 55.8 165 24.2
BcaC04g21538 Brassica carinata HOM05D000012 ORTHO05D000567 8.4e-06 55.8 191 25.7
CARHR144670 Cardamine hirsuta HOM05D000012 ORTHO05D000567 8.4e-06 55.8 191 25.7
Ciclev10003930m.g Citrus clementina HOM05D000012 ORTHO05D000567 8.4e-06 55.8 239 25.9
Cc10_g02250 Coffea canephora HOM05D000012 ORTHO05D000567 8.4e-06 55.8 201 25.9
Sp2g13450 Schrenkiella parvula HOM05D000012 ORTHO05D000567 8.4e-06 55.8 191 25.7


User provided reference genes

Program Settings