Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.4e-292 1008.1 502 100.0
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 3.6e-195 685.3 433 75.5
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 2.6e-185 652.5 419 73.3
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 4.2e-183 645.2 449 70.4
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 1.6e-134 483.8 429 53.1
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 1.7e-75 287.7 396 40.4
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.2e-41 175.3 421 32.8
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 9.7e-39 165.6 423 31.4
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 1.3e-38 165.2 424 31.6
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 2.8e-38 164.1 422 30.8
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 4.8e-38 163.3 457 29.8
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 8.2e-38 162.5 442 30.3
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 1.8e-37 161.4 423 30.7
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 2.4e-37 161.0 288 35.8
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 2.4e-37 161.0 456 28.7
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 3.1e-37 160.6 434 30.2
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 4.1e-37 160.2 439 29.2
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 4.1e-37 160.2 447 28.0
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 5.3e-37 159.8 469 29.2
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 5.3e-37 159.8 431 29.9
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 6.9e-37 159.5 421 31.4
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 9.0e-37 159.1 444 29.3
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 2.0e-36 157.9 430 30.5
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 4.5e-36 156.8 446 28.3
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 7.7e-36 156.0 421 30.6
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 1.3e-35 155.2 443 28.4
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.3e-35 155.2 453 28.5
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.3e-35 155.2 424 30.7
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 2.2e-35 154.5 442 28.5
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 2.2e-35 154.5 414 29.0
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 2.9e-35 154.1 416 29.3
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 2.9e-35 154.1 423 29.6
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 2.9e-35 154.1 424 30.0
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 3.8e-35 153.7 436 28.9
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 8.5e-35 152.5 439 30.1
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 1.4e-34 151.8 416 29.6
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.4e-34 151.8 429 29.6
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.9e-34 151.4 420 29.5
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 1.9e-34 151.4 420 29.5
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 3.2e-34 150.6 435 28.5
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 3.2e-34 150.6 427 29.5
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 4.2e-34 150.2 422 29.4
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 4.2e-34 150.2 491 28.1
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 4.2e-34 150.2 362 32.3
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 4.2e-34 150.2 416 30.5
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 5.5e-34 149.8 431 28.3
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 5.5e-34 149.8 425 29.9
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 5.5e-34 149.8 461 29.7
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 5.5e-34 149.8 461 29.7
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 7.2e-34 149.4 447 29.1
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 9.4e-34 149.1 447 28.4
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 9.4e-34 149.1 387 30.0
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 2.1e-33 147.9 415 28.9
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 2.1e-33 147.9 424 29.2
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 2.7e-33 147.5 409 29.1
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 2.7e-33 147.5 452 26.8
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 3.6e-33 147.1 439 27.1
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 3.6e-33 147.1 445 28.8
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 4.6e-33 146.7 442 26.9
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 4.6e-33 146.7 418 28.9
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 4.6e-33 146.7 425 29.2
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 7.9e-33 146.0 441 27.0
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 7.9e-33 146.0 415 28.2
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 1.0e-32 145.6 422 30.6
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 1.0e-32 145.6 425 28.9
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.4e-32 145.2 445 28.1
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 1.8e-32 144.8 497 26.8
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.8e-32 144.8 420 27.4
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 2.3e-32 144.4 417 28.5
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 2.3e-32 144.4 417 27.8
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.3e-32 144.4 289 32.2
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 3.9e-32 143.7 443 28.2
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 5.1e-32 143.3 406 27.6
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 6.7e-32 142.9 443 29.1
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 6.7e-32 142.9 383 30.0
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 6.7e-32 142.9 329 30.7
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 6.7e-32 142.9 422 28.9
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 8.8e-32 142.5 416 28.1
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.5e-31 141.7 439 27.1
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 1.5e-31 141.7 288 33.7
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 2.0e-31 141.4 408 30.1
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 3.3e-31 140.6 437 27.5
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 4.3e-31 140.2 415 27.7
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 5.7e-31 139.8 413 27.4
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 1.3e-30 138.7 427 28.6
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 1.3e-30 138.7 427 28.6
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.3e-30 138.7 410 29.8
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 2.2e-30 137.9 432 29.2
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.8e-30 137.5 426 28.2
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 6.3e-30 136.3 406 29.1
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.4e-29 135.2 439 28.2
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 1.8e-29 134.8 437 28.8
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.2e-28 132.1 287 31.7
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.5e-28 131.7 154 43.5
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 1.7e-27 128.3 537 24.8
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 3.8e-27 127.1 312 30.1
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 1.1e-26 125.6 465 25.6
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.9e-26 124.8 291 32.0
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 4.2e-26 123.6 451 27.5
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.7e-25 120.9 158 40.5
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 3.6e-25 120.6 359 29.0
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 7.9e-25 119.4 329 29.2
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 6.7e-24 116.3 417 26.4
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.1e-23 115.5 161 41.6
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 2.0e-23 114.8 148 39.9
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 4.4e-23 113.6 238 30.3
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 5.7e-23 113.2 163 38.7
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.3e-22 112.1 416 27.9
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 4.1e-21 107.1 364 27.2
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 4.1e-21 107.1 291 30.2
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 1.5e-20 105.1 172 37.2
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.5e-18 98.6 357 26.6
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.9e-18 98.2 427 26.0
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.2e-14 84.7 118 39.0
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.8e-13 81.6 218 26.6
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 6.5e-11 73.2 234 26.1
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 7.2e-10 69.7 313 26.5
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 8.8e-08 62.8 310 23.5


User provided reference genes

Program Settings