Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0084 Marchantia polymorpha HOM05D014122 ORTHO05D015848 1.1e-203 713.0 338 100.0
Pp3c27_5320 Physcomitrium patens HOM05D014122 ORTHO05D015848 1.6e-93 347.1 270 60.0
AagrBONN_evm.TU.Sc2ySwM_344.1892 Anthoceros agrestis HOM05D014122 ORTHO05D015848 4.3e-91 339.0 253 60.1
Pp3c9_3490 Physcomitrium patens HOM05D014122 ORTHO05D015848 4.0e-89 332.4 272 57.0
AagrBONN_evm.TU.Sc2ySwM_344.1890 Anthoceros agrestis HOM05D014122 ORTHO05D015848 3.3e-83 312.8 263 55.9
Pp3c2_3950 Physcomitrium patens HOM05D014122 ORTHO05D015848 1.1e-81 307.8 278 52.5
Mapoly0138s0015 Marchantia polymorpha HOM05D014122 ORTHO05D015848 1.3e-79 300.8 328 47.3
Mapoly0095s0059 Marchantia polymorpha HOM05D014122 ORTHO05D015848 5.1e-76 288.9 336 46.4
SEGI_10425 Sequoiadendron giganteum HOM05D014122 ORTHO05D015848 9.6e-75 284.6 271 52.4
Pp3c15_11100 Physcomitrium patens HOM05D014122 ORTHO05D015848 3.2e-70 269.6 271 51.7
SEGI_10455 Sequoiadendron giganteum HOM05D014122 ORTHO05D015848 4.3e-67 259.2 245 51.8
Migut.D00843 Erythranthe guttata HOM05D000860 ORTHO05D003230 1.3e-10 71.6 215 24.2
CSS0046750 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D003230 3.7e-10 70.1 216 25.9
CSS0010257 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D003230 2.4e-09 67.4 216 25.5
Lj1P125T29 Lonicera japonica HOM05D000860 ORTHO05D003230 2.4e-09 67.4 215 23.3
Actinidia20772 Actinidia chinensis HOM05D000860 ORTHO05D003230 3.1e-09 67.0 213 25.8
DCAR_028889 Daucus carota HOM05D000860 ORTHO05D003230 3.1e-09 67.0 212 25.0
Gorai.012G119400 Gossypium raimondii HOM05D000860 ORTHO05D003230 3.1e-09 67.0 241 23.7
Cfa011786 Carpinus fangiana HOM05D000860 ORTHO05D003230 4.1e-09 66.6 265 24.2
Gohir.D04G135600 Gossypium hirsutum HOM05D000860 ORTHO05D003230 5.4e-09 66.2 241 23.7
Gorai.013G013000 Gossypium raimondii HOM05D000860 ORTHO05D003230 5.4e-09 66.2 247 22.7
Gohir.A13G011100 Gossypium hirsutum HOM05D000860 ORTHO05D003230 7.0e-09 65.9 217 26.3
Psat3g123000 Pisum sativum HOM05D000860 ORTHO05D003230 9.2e-09 65.5 247 22.7
TWI79G0172 Tripterygium wilfordii HOM05D000860 ORTHO05D003230 1.2e-08 65.1 216 24.5
Gohir.D13G011800 Gossypium hirsutum HOM05D000860 ORTHO05D003230 2.0e-08 64.3 247 22.3
arahy.Tifrunner.gnm1.ann1.68WIDH Arachis hypogaea HOM05D000860 ORTHO05D003230 2.7e-08 63.9 211 25.6
Duzib128G1948 Durio zibethinus HOM05D000860 ORTHO05D003230 2.7e-08 63.9 245 22.9
arahy.Tifrunner.gnm1.ann1.WZ1PKC Arachis hypogaea HOM05D000860 ORTHO05D003230 3.5e-08 63.5 211 25.6
COL.COLO4_14442 Corchorus olitorius HOM05D000860 ORTHO05D003230 4.5e-08 63.2 226 23.5
PGR031G3676 Punica granatum HOM05D000860 ORTHO05D003230 4.5e-08 63.2 209 24.9
Rhsim13G0063300 Rhododendron simsii HOM05D000860 ORTHO05D003230 4.5e-08 63.2 217 24.9
EL10Ac7g16796 Beta vulgaris HOM05D000860 ORTHO05D003230 5.9e-08 62.8 216 23.6
AUR62026337 Chenopodium quinoa HOM05D000860 ORTHO05D003230 5.9e-08 62.8 218 25.2
Haze_24422 Corylus avellana HOM05D000860 ORTHO05D003230 5.9e-08 62.8 217 26.3
HanXRQChr15g0463331 Helianthus annuus HOM05D000860 ORTHO05D003230 5.9e-08 62.8 217 24.0
Hma1.2p1_0501F.1_g167300 Hydrangea macrophylla HOM05D000860 ORTHO05D003230 5.9e-08 62.8 216 24.1
Lsat_1_v5_gn_9_14620 Lactuca sativa HOM05D000860 ORTHO05D003230 5.9e-08 62.8 214 23.8
Thecc.05G005900 Theobroma cacao HOM05D000860 ORTHO05D003230 5.9e-08 62.8 247 21.5
arahy.Tifrunner.gnm1.ann1.704HAC Arachis hypogaea HOM05D000860 ORTHO05D003230 7.8e-08 62.4 254 22.8
AUR62006288 Chenopodium quinoa HOM05D000860 ORTHO05D003230 7.8e-08 62.4 218 25.7
Medtr7g070530 Medicago truncatula HOM05D000860 ORTHO05D003230 7.8e-08 62.4 245 22.0
Nitab4.5_0001226g0060 Nicotiana tabacum HOM05D000860 ORTHO05D003230 7.8e-08 62.4 216 23.6
Cc08_g08050 Coffea canephora HOM05D000860 ORTHO05D003230 1.0e-07 62.0 218 24.8
Hma1.2p1_1586F.1_g292130 Hydrangea macrophylla HOM05D000860 ORTHO05D003230 1.0e-07 62.0 211 23.7
Nitab4.5_0000047g0160 Nicotiana tabacum HOM05D000860 ORTHO05D003230 1.0e-07 62.0 216 23.1
TPR.G18667 Trifolium pratense HOM05D000860 ORTHO05D003230 1.0e-07 62.0 217 24.4
arahy.Tifrunner.gnm1.ann1.ZE0YJW Arachis hypogaea HOM05D000860 ORTHO05D003230 1.3e-07 61.6 254 22.4
CSS0013654 Camellia sinensis var. sinensis HOM05D000860 ORTHO05D003230 1.3e-07 61.6 215 23.3
TAR369G0317 Trochodendron aralioides HOM05D000860 ORTHO05D003230 1.3e-07 61.6 216 25.9
TAR623G1426 Trochodendron aralioides HOM05D000860 ORTHO05D003230 1.3e-07 61.6 211 25.6
Ah.08g210010 Amaranthus hybridus HOM05D000860 ORTHO05D003230 1.7e-07 61.2 219 26.0
Eucgr.A00626 Eucalyptus grandis HOM05D000860 ORTHO05D003230 1.7e-07 61.2 208 25.5
Duzib093G1744 Durio zibethinus HOM05D000860 ORTHO05D003230 2.3e-07 60.8 246 23.6
Glyma.01G127900 Glycine max HOM05D000860 ORTHO05D003230 2.3e-07 60.8 217 23.5
Phvul.008G091100 Phaseolus vulgaris HOM05D000860 ORTHO05D003230 2.3e-07 60.8 214 22.4
Aqoxy2G00764 Aquilegia oxysepala HOM05D000860 ORTHO05D003230 2.9e-07 60.5 215 23.3
CAN.G1034.32 Capsicum annuum HOM05D000860 ORTHO05D003230 2.9e-07 60.5 216 23.6
Dinv12180 Davidia involucrata HOM05D000860 ORTHO05D003230 2.9e-07 60.5 216 23.1
Dinv35418 Davidia involucrata HOM05D000860 ORTHO05D003230 2.9e-07 60.5 221 24.9
Lj3A945T20 Lonicera japonica HOM05D000860 ORTHO05D003230 2.9e-07 60.5 215 24.7
Lalb_Chr01g0023431 Lupinus albus HOM05D000860 ORTHO05D003230 2.9e-07 60.5 211 24.2
Eucgr.K02942 Eucalyptus grandis HOM05D000860 ORTHO05D003230 3.8e-07 60.1 212 24.1
Lsat_1_v5_gn_9_36341 Lactuca sativa HOM05D000860 ORTHO05D003230 3.8e-07 60.1 215 23.7
Oeu057641.1 Olea europaea HOM05D000860 ORTHO05D003230 3.8e-07 60.1 216 22.2
Ah.15g090430 Amaranthus hybridus HOM05D000860 ORTHO05D003230 5.0e-07 59.7 223 24.7
RcHm_v2.0_Chr5g0071801 Rosa chinensis HOM05D000860 ORTHO05D003230 5.0e-07 59.7 216 21.3
VMungo1383G2980 Vigna mungo HOM05D000860 ORTHO05D003230 5.0e-07 59.7 212 24.1
MSTRG.18972 Avicennia marina HOM05D000860 ORTHO05D003230 6.6e-07 59.3 215 21.9
TWI77G0752 Tripterygium wilfordii HOM05D000860 ORTHO05D003230 6.6e-07 59.3 218 21.6
Lj1g0022602 Lotus japonicus HOM05D000860 ORTHO05D003230 8.6e-07 58.9 209 21.5
Lj6g0019825 Lotus japonicus HOM05D000860 ORTHO05D003230 8.6e-07 58.9 215 22.8
Psat7g249520 Pisum sativum HOM05D000860 ORTHO05D003230 8.6e-07 58.9 209 23.9
Rhsim05G0226400 Rhododendron simsii HOM05D000860 ORTHO05D003230 8.6e-07 58.9 218 24.3
Aa31LG1G23330 Aethionema arabicum HOM05D000860 ORTHO05D003230 1.1e-06 58.5 221 24.9
Aqoxy1G01269 Aquilegia oxysepala HOM05D000860 ORTHO05D003230 1.1e-06 58.5 216 23.6
Sc20g0006730 Simmondsia chinensis HOM05D000860 ORTHO05D003230 1.1e-06 58.5 219 26.0
TWI53G1879 Tripterygium wilfordii HOM05D000860 ORTHO05D003230 1.1e-06 58.5 218 23.4
EL10Ac7g15878 Beta vulgaris HOM05D000860 ORTHO05D003230 1.5e-06 58.2 215 23.7
ECA248G0775 Erigeron canadensis HOM05D000860 ORTHO05D003230 1.5e-06 58.2 215 23.3
Lsat_1_v5_gn_5_149681 Lactuca sativa HOM05D000860 ORTHO05D003230 1.5e-06 58.2 215 23.3
Lalb_Chr20g0114681 Lupinus albus HOM05D000860 ORTHO05D003230 1.5e-06 58.2 215 22.8
PGSC0003DMG400011624 Solanum tuberosum HOM05D000860 ORTHO05D003230 1.5e-06 58.2 218 24.3
Ca_07705_v3 Cicer arietinum L. HOM05D000860 ORTHO05D003230 1.9e-06 57.8 247 20.6
Cc00_g13870 Coffea canephora HOM05D000860 ORTHO05D003230 1.9e-06 57.8 217 24.4
Glyma.11G163400 Glycine max HOM05D000860 ORTHO05D003230 1.9e-06 57.8 286 21.0
Phvul.006G074500 Phaseolus vulgaris HOM05D000860 ORTHO05D003230 1.9e-06 57.8 215 28.8
Sopen09g008660 Solanum pennellii HOM05D000860 ORTHO05D003230 1.9e-06 57.8 218 23.9
unitig_699.g19374 Utricularia gibba HOM05D000860 ORTHO05D003230 1.9e-06 57.8 223 23.8
CDE06G0504 Ceratophyllum demersum HOM05D000860 ORTHO05D003230 2.5e-06 57.4 214 24.3
Lj2C66T8 Lonicera japonica HOM05D000860 ORTHO05D003230 2.5e-06 57.4 216 23.1
Thecc.09G358600 Theobroma cacao HOM05D000860 ORTHO05D003230 2.5e-06 57.4 217 23.0
VMungo0540G0584 Vigna mungo HOM05D000860 ORTHO05D003230 2.5e-06 57.4 231 25.1
AagrBONN_evm.TU.Sc2ySwM_228.3756 Anthoceros agrestis HOM05D000860 ORTHO05D003230 3.3e-06 57.0 210 25.7
Ca_20364_v3 Cicer arietinum L. HOM05D000860 ORTHO05D003230 3.3e-06 57.0 216 25.0
Manes.09G112500 Manihot esculenta HOM05D000860 ORTHO05D003230 3.3e-06 57.0 222 22.5
Sp6g40970 Schrenkiella parvula HOM05D000860 ORTHO05D003230 3.3e-06 57.0 222 24.8
Glyma.18G208202 Glycine max HOM05D000860 ORTHO05D003230 4.3e-06 56.6 209 25.8
PSO339G4857 Papaver somniferum HOM05D000860 ORTHO05D003230 4.3e-06 56.6 244 23.4
PSO384G2948 Papaver somniferum HOM05D000860 ORTHO05D003230 4.3e-06 56.6 244 23.4
Actinidia29066 Actinidia chinensis HOM05D000860 ORTHO05D003230 5.6e-06 56.2 177 24.9
CiPaw.09G215900 Carya illinoinensis HOM05D000860 ORTHO05D003230 5.6e-06 56.2 220 22.7
Ca_15014_v3 Cicer arietinum L. HOM05D000860 ORTHO05D003230 5.6e-06 56.2 215 22.3
Medtr4g013290 Medicago truncatula HOM05D000860 ORTHO05D003230 5.6e-06 56.2 214 24.3
Solyc09g015040.1 Solanum lycopersicum HOM05D000860 ORTHO05D003230 5.6e-06 56.2 218 23.9
AT5G01710 Arabidopsis thaliana HOM05D000860 ORTHO05D003230 7.3e-06 55.8 224 25.4
Cpa.g.sc5.246 Carica papaya HOM05D000860 ORTHO05D003230 7.3e-06 55.8 212 23.1
Lj3g0009918 Lotus japonicus HOM05D000860 ORTHO05D003230 7.3e-06 55.8 219 20.5
Peaxi162Scf00744g00024 Petunia axillaris HOM05D000860 ORTHO05D003230 7.3e-06 55.8 216 22.7
unitig_27.g24876 Utricularia gibba HOM05D000860 ORTHO05D003230 7.3e-06 55.8 222 22.1
AL6G10340 Arabidopsis lyrata HOM05D000860 ORTHO05D003230 9.5e-06 55.5 221 24.9
BcaC03g13085 Brassica carinata HOM05D000860 ORTHO05D003230 9.5e-06 55.5 220 25.5
CiPaw.10G161200 Carya illinoinensis HOM05D000860 ORTHO05D003230 9.5e-06 55.5 218 23.9
Thhalv10015877m.g Eutrema salsugineum HOM05D000860 ORTHO05D003230 9.5e-06 55.5 222 24.3
FAN11G3204 Fragaria x ananassa HOM05D000860 ORTHO05D003230 9.5e-06 55.5 213 24.4
FAN16G1489 Fragaria x ananassa HOM05D000860 ORTHO05D003230 9.5e-06 55.5 213 24.4
FAN21G0721 Fragaria x ananassa HOM05D000860 ORTHO05D003230 9.5e-06 55.5 213 23.9
Glyma.09G280600 Glycine max HOM05D000860 ORTHO05D003230 9.5e-06 55.5 215 23.3
MD04G1167500 Malus domestica HOM05D000860 ORTHO05D003230 9.5e-06 55.5 216 23.1
Phvul.010G062900 Phaseolus vulgaris HOM05D000860 ORTHO05D003230 9.5e-06 55.5 213 23.5
Sed0022692 Sechium edule HOM05D000860 ORTHO05D003230 9.5e-06 55.5 212 23.1
Zm00001eb111920 Zea mays HOM05D000860 ORTHO05D003230 9.5e-06 55.5 207 23.2


User provided reference genes

Program Settings