Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 5.6e-73 277.3 123 100.0
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 1.0e-26 123.6 119 45.4
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 3.0e-26 122.1 119 46.2
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 2.5e-25 119.0 120 44.2
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 8.2e-24 114.0 118 41.5
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.8e-23 112.8 119 42.9
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 3.1e-23 112.1 124 42.7
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 5.3e-23 111.3 124 44.4
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.6e-22 109.0 122 39.3
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 2.6e-22 109.0 119 39.5
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 3.4e-22 108.6 119 41.2
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 4.5e-22 108.2 119 42.0
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 5.9e-22 107.8 119 38.7
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 7.6e-22 107.5 121 42.1
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 7.6e-22 107.5 128 39.8
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.7e-21 106.3 119 40.3
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 2.2e-21 105.9 119 38.7
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 2.2e-21 105.9 120 40.0
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 2.9e-21 105.5 119 37.0
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 3.8e-21 105.1 119 38.7
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 3.8e-21 105.1 118 38.1
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 6.5e-21 104.4 119 39.5
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 6.5e-21 104.4 119 37.8
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 6.5e-21 104.4 121 40.5
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 1.1e-20 103.6 120 38.3
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 1.4e-20 103.2 120 40.0
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 1.4e-20 103.2 121 40.5
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 1.4e-20 103.2 124 41.1
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 2.5e-20 102.4 129 36.4
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 5.5e-20 101.3 122 38.5
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 5.5e-20 101.3 119 37.0
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 7.2e-20 100.9 119 39.5
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 7.2e-20 100.9 129 37.2
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 7.2e-20 100.9 119 37.0
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 7.2e-20 100.9 118 36.4
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 9.3e-20 100.5 121 38.8
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 9.3e-20 100.5 128 36.7
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 9.3e-20 100.5 121 38.8
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 9.3e-20 100.5 118 38.1
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 1.2e-19 100.1 119 36.1
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.6e-19 99.8 120 35.8
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 1.6e-19 99.8 119 38.7
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 2.7e-19 99.0 119 37.8
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 3.6e-19 98.6 122 36.9
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 3.6e-19 98.6 122 36.9
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 3.6e-19 98.6 119 37.8
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 3.6e-19 98.6 118 35.6
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 6.1e-19 97.8 121 38.8
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 6.1e-19 97.8 121 38.8
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 6.1e-19 97.8 121 38.8
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.0e-18 97.1 110 42.7
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 1.0e-18 97.1 119 39.5
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 1.4e-18 96.7 119 36.1
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 2.3e-18 95.9 119 37.8
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 2.3e-18 95.9 118 34.7
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 3.0e-18 95.5 113 37.2
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 3.9e-18 95.1 119 35.3
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 5.1e-18 94.7 119 35.3
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 5.1e-18 94.7 117 34.2
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 6.7e-18 94.4 119 34.5
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 6.7e-18 94.4 120 39.2
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 1.1e-17 93.6 112 34.8
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 1.5e-17 93.2 118 35.6
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.9e-17 92.8 124 37.9
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.9e-17 92.8 120 35.0
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 2.5e-17 92.4 121 35.5
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 2.5e-17 92.4 130 35.4
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 2.5e-17 92.4 120 35.0
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 7.4e-17 90.9 119 32.8
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 7.4e-17 90.9 120 36.7
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 7.4e-17 90.9 120 34.2
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 7.4e-17 90.9 119 35.3
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 9.7e-17 90.5 119 33.6
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 1.3e-16 90.1 119 34.5
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 1.3e-16 90.1 120 34.2
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 2.2e-16 89.4 121 33.9
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 3.7e-16 88.6 126 34.9
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 4.8e-16 88.2 120 37.5
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 6.3e-16 87.8 106 38.7
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 8.2e-16 87.4 124 36.3
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.1e-15 87.0 119 36.1
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 1.1e-15 87.0 119 36.1
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 1.4e-15 86.7 116 33.6
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 6.9e-15 84.3 112 33.9
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 9.1e-15 84.0 109 34.9
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 9.1e-15 84.0 117 36.8
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 1.2e-14 83.6 122 33.6
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 3.4e-14 82.0 112 33.0
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 8.5e-13 77.4 106 32.1
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 1.9e-12 76.3 65 40.0
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 5.1e-10 68.2 79 41.8
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 3.3e-09 65.5 90 31.1


User provided reference genes

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