Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.7e-79 299.3 153 100.0
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 6.6e-31 137.9 133 50.4
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 9.5e-30 134.0 156 47.4
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 2.8e-29 132.5 149 44.3
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 4.7e-29 131.7 151 47.7
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 6.2e-29 131.3 148 47.3
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 8.0e-29 131.0 149 44.3
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 8.0e-29 131.0 124 48.4
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 2.3e-28 129.4 123 52.0
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 4.0e-28 128.6 122 50.0
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 6.8e-28 127.9 162 45.7
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 6.8e-28 127.9 123 49.6
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.9e-28 127.5 134 47.0
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 8.9e-28 127.5 134 47.0
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.5e-27 126.7 134 47.0
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.5e-27 126.7 127 48.8
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 1.5e-27 126.7 127 49.6
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 3.4e-27 125.6 146 45.2
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 4.4e-27 125.2 149 43.6
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 4.4e-27 125.2 149 44.3
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 4.4e-27 125.2 149 43.6
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 4.4e-27 125.2 136 46.3
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 5.8e-27 124.8 131 48.1
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 5.8e-27 124.8 136 45.6
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 7.5e-27 124.4 149 43.6
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 7.5e-27 124.4 150 42.7
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 7.5e-27 124.4 119 48.7
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 9.8e-27 124.0 134 45.5
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 9.8e-27 124.0 147 46.9
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 1.3e-26 123.6 134 47.0
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 1.3e-26 123.6 167 44.3
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.3e-26 123.6 153 43.8
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 1.7e-26 123.2 119 51.3
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.7e-26 123.2 139 47.5
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 1.7e-26 123.2 144 45.1
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.7e-26 123.2 119 48.7
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 2.2e-26 122.9 153 42.5
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 2.2e-26 122.9 167 44.3
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 2.2e-26 122.9 161 44.7
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 2.2e-26 122.9 131 47.3
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 2.2e-26 122.9 119 48.7
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 2.2e-26 122.9 119 48.7
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 2.2e-26 122.9 134 46.3
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 2.9e-26 122.5 153 45.8
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 2.9e-26 122.5 153 45.8
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.9e-26 122.5 130 50.8
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 3.7e-26 122.1 128 47.7
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.7e-26 122.1 128 47.7
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 3.7e-26 122.1 150 46.7
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 3.7e-26 122.1 134 45.5
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 4.9e-26 121.7 158 43.7
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 4.9e-26 121.7 144 45.8
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 4.9e-26 121.7 149 43.0
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 4.9e-26 121.7 119 50.4
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.9e-26 121.7 157 43.3
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 4.9e-26 121.7 149 45.0
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 6.4e-26 121.3 145 46.9
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 6.4e-26 121.3 149 43.0
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 6.4e-26 121.3 119 51.3
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 6.4e-26 121.3 132 48.5
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 6.4e-26 121.3 128 46.9
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 6.4e-26 121.3 138 46.4
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 6.4e-26 121.3 157 45.2
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 8.3e-26 120.9 131 47.3
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 8.3e-26 120.9 131 47.3
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 8.3e-26 120.9 150 44.0
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.1e-25 120.6 138 46.4
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 1.4e-25 120.2 143 45.5
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 1.4e-25 120.2 143 45.5
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.4e-25 120.2 129 45.7
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-25 120.2 154 43.5
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.4e-25 120.2 154 43.5
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.9e-25 119.8 138 46.4
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 1.9e-25 119.8 138 46.4
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.9e-25 119.8 122 45.9
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.9e-25 119.8 129 46.5
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 1.9e-25 119.8 132 47.0
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 1.9e-25 119.8 143 44.8
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 2.4e-25 119.4 128 46.1
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 2.4e-25 119.4 142 44.4
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.4e-25 119.4 141 44.7
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 2.4e-25 119.4 154 41.6
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 2.4e-25 119.4 134 45.5
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 2.4e-25 119.4 155 45.2
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 3.2e-25 119.0 131 45.8
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 4.1e-25 118.6 155 41.3
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 4.1e-25 118.6 131 45.8
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 4.1e-25 118.6 142 43.0
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 5.4e-25 118.2 130 46.2
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 5.4e-25 118.2 119 47.9
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 5.4e-25 118.2 132 48.5
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 7.0e-25 117.9 122 50.0
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 9.2e-25 117.5 131 47.3
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 9.2e-25 117.5 154 44.2
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.2e-24 117.1 153 42.5
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.2e-24 117.1 137 45.3
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.2e-24 117.1 157 43.3
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 2.7e-24 115.9 131 42.7
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 3.5e-24 115.5 151 41.1
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 4.6e-24 115.2 134 44.0
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 7.8e-24 114.4 142 43.0
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 7.8e-24 114.4 141 44.0
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 1.7e-23 113.2 138 41.3
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 3.0e-23 112.5 150 40.7
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 8.6e-23 110.9 119 46.2
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 1.5e-22 110.2 119 46.2
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 3.3e-22 109.0 113 48.7
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 1.4e-20 103.6 115 47.8
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 4.0e-20 102.1 137 40.9
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 5.2e-20 101.7 92 51.1
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 8.9e-20 100.9 132 43.9
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 1.9e-17 93.2 126 41.3
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 4.1e-17 92.0 105 46.7
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 7.3e-14 81.3 74 47.3
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 3.6e-13 79.0 89 41.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 8.1e-13 77.8 100 44.0
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.1e-12 77.4 89 42.7
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.1e-12 75.9 76 50.0
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 4.0e-12 75.5 124 37.9
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 2.6e-11 72.8 140 35.0
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 4.4e-11 72.0 146 33.6
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.6e-08 63.5 103 41.7


User provided reference genes

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